HHsearch alignment of GI: 254780913 and MMDB domain: 3i2z_B_

>3i2z_B (B:) RNA chaperone, negative regulator of CSPA transcription; beta barrel, DNA binding protein/transcription, cytoplasm, gene regulation; 1.10A {Salmonella typhimurium} PDB: 1mjc_A 3mef_A

Probab=99.86  E-value=5.4e-22  Score=143.36  Aligned_cols=68  Identities=40%  Similarity=0.750  Sum_probs=62.5

Q ss_pred             CCCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEC
Q ss_conf             9877627751468874658854887788379999500023588446899889999998699971110599963
Q gi|254780913|r    1 MVHRGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANGKYSAENLKLV   73 (78)
Q Consensus         1 mm~~G~VKwfn~~kGfGFI~~d~~~d~g~DvFvH~s~i~~~g~~~l~~G~~V~F~i~~~~~~gk~~A~~v~~i   73 (78)
                      .|.+|+|||||.+||||||++|   ++++|||+|+|+|...+++.|.+|++|+|++++++++  ++|.+|++|
T Consensus         4 ~~~~G~Vk~f~~~kGyGFI~~~---~g~~dif~h~s~l~~~~~~~l~~G~~V~f~~~~~~kG--~~A~~V~~i   71 (71)
T 3i2z_B            4 SKIKGNVKWFNESKGFGFITPE---DGSKDVFVHFSAIQTNGFKTLAEGQRVEFEITNGAKG--PSAANVTAL   71 (71)
T ss_dssp             -CEEEEEEEEETTTTEEEEEET---TCCCCEEEEGGGBCCSSCCCCCTTCEEEEEEEEETTE--EEEEEEEEC
T ss_pred             CCCEEEEEEECCCCCEEEEEEC---CCCCCEEEEHHHHCCCCCCCCCCCCEEEEEEEECCCC--CEEEEEEEC
T ss_conf             5004799999099984899868---9981299991880613798589999999999969999--786888959