HHsearch results for GI: 254780913 and protein with PDBid: 2ytv_A
>2ytv_A Cold shock domain-containing protein E1; cell-free protein synthesis, beta-barrel, translational REGU RNA chaperone, RNA/DNA binding, QB fold; NMR {Homo sapiens}
Probab=99.68 E-value=1.8e-17 Score=117.31 Aligned_cols=71 Identities=27% Similarity=0.433 Sum_probs=60.2
Q ss_pred CCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCC
Q ss_conf 87762775146887465885488778837999950002358844689988999999869997111059996357889
Q gi|254780913|r 2 VHRGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANGKYSAENLKLVPKSSN 78 (78)
Q Consensus 2 m~~G~VKwfn~~kGfGFI~~d~~~d~g~DvFvH~s~i~~~g~~~l~~G~~V~F~i~~~~~~gk~~A~~v~~i~~~~~ 78 (78)
|.+|+|+|+. +|||||++. .++++|||||+|+|.. .+.|.+|++|+|++.+++++||++|++|+.|+..++
T Consensus 8 ~~~G~v~s~k--~gfGFI~~~--~~~g~diF~H~s~i~~--~~~L~~G~~V~F~v~~~~rggk~~A~~V~~l~~p~s 78 (79)
T 2ytv_A 8 LRRATVECVK--DQFGFINYE--VGDSKKLFFHVKEVQD--GIELQAGDEVEFSVILNQRTGKCSACNVWRVSGPSS 78 (79)
T ss_dssp BCCEEEEECC--SSEEEESCC--CSSSSSEEEETTTCCS--SCCCCTTCEEECBCEECSSSCCEECCSCEECSCCCC
T ss_pred CEEEEEEEEC--CCEEEEEEC--CCCCCEEEEEHHHCCC--CCCCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCC
T ss_conf 0789998945--971177706--8899669999788589--875799999999999899899158788787788999