HHsearch results for GI: 254780913 and protein with PDBid: 2yty_A
>2yty_A Cold shock domain-containing protein E1; cell-free protein synthesis, beta-barrel, translational REGU RNA chaperone, RNA/DNA binding, QB fold; NMR {Homo sapiens}
Probab=99.72 E-value=3.6e-18 Score=121.14 Aligned_cols=70 Identities=23% Similarity=0.395 Sum_probs=59.5
Q ss_pred CCCCEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCC
Q ss_conf 87762775146887465885488778837999950002358844689988999999869997111059996357889
Q gi|254780913|r 2 VHRGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANGKYSAENLKLVPKSSN 78 (78)
Q Consensus 2 m~~G~VKwfn~~kGfGFI~~d~~~d~g~DvFvH~s~i~~~g~~~l~~G~~V~F~i~~~~~~gk~~A~~v~~i~~~~~ 78 (78)
+.+|+|+|| .||||||+++ ++++|||||+|+|.. +++.|.+|++|+|++.+ +++|+++|.||+.+...++
T Consensus 18 R~~G~I~~~--kkGfGFI~~~---~~~~diF~H~s~~~~-~~~~l~~G~~V~F~v~~-~~~Gk~~A~~V~~~~~p~s 87 (88)
T 2yty_A 18 RLLGYVATL--KDNFGFIETA---NHDKEIFFHYSEFSG-DVDSLELGDMVEYSLSK-GKGNKVSAEKVNKTSGPSS 87 (88)
T ss_dssp CEEEEEEEE--CSSEEEEECS---SSSCEEEEETTTCCS-CTTTCCTTCEEEECCCC-CSCSCCBCCSCEECCCCCC
T ss_pred EEEEEEEEE--ECEEEEEEEC---CCCCCEEEEHHHHCC-CCCCCCCCCEEEEEEEE-CCCCCEEEEEEECCCCCCC
T ss_conf 778999999--5708389708---999319999699316-88856899999999998-9999988588761788989