HHsearch results for GI: 254780913 and protein with PDBid: 3ice_A

>3ice_A Transcription termination factor RHO; transcription, ATPase, hexamer, helicase, RNA, RECA, OB fold, motor, ATP-binding, hydrolase; HET: MSE ADP SPD; 2.80A {Escherichia coli k-12} PDB: 1pv4_A 1pvo_A* 1xpo_A* 1xpr_A* 1xpu_A* 2ht1_A

Probab=93.10  E-value=0.062  Score=30.53  Aligned_cols=58  Identities=19%  Similarity=0.376  Sum_probs=39.4

Q ss_pred             CCCEEEEEE--CCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCC-EEEEEC
Q ss_conf             887465885--4887788379999500023588446899889999998699971110-599963
Q gi|254780913|r   13 DKGYGFITP--EGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANGKYSA-ENLKLV   73 (78)
Q Consensus        13 ~kGfGFI~~--d~~~d~g~DvFvH~s~i~~~g~~~l~~G~~V~F~i~~~~~~gk~~A-~~v~~i   73 (78)
                      ..||||+..  .+...+..||||..+-|+..+   |+.|+.|.-.+..-..+.++-| ..|..+
T Consensus        62 ~dg~Gflr~~~~~y~~~~~DiyVs~~~ir~~~---Lr~Gd~v~G~~r~~~~~e~~~~l~~V~~v  122 (422)
T 3ice_A           62 QDGFGFLRSADSSYLAGPDDIYVSPSQIRRFN---LRTGDTISGKIRPPKEGERYFALLKVNEV  122 (422)
T ss_dssp             TTSCEEEECGGGTTCCCTTCEEBCHHHHHHHT---CCTTCEEEEEEECCCSSCCSEEEEEEEEE
T ss_pred             CCCCEEEECCCCCCCCCCCCEEECHHHHHHHC---CCCCCEEEEEEECCCCCCCCCCCEEEHHC
T ss_conf             89967852775588999988538989998808---88899899987478777777631342320