HHSEARCH alignment of GI: 254780913 and SCOP domain: d2ix0a1

Alignment

Probab=94.16  E-value=0.17  Score=26.71  Aligned_cols=67  Identities=10%  Similarity=0.071  Sum_probs=47.1

Q ss_pred             EEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECC-CCCC-CCCEEEEECCCCC
Q ss_conf             775146887465885488778837999950002358844689988999999869-9971-1105999635788
Q gi|254780913|r    7 IKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQND-ANGK-YSAENLKLVPKSS   77 (78)
Q Consensus         7 VKwfn~~kGfGFI~~d~~~d~g~DvFvH~s~i~~~g~~~l~~G~~V~F~i~~~~-~~gk-~~A~~v~~i~~~~   77 (78)
                      |=.|-..+|++|+.||+.. =..|||+--...   +....++||.|..++.+-+ ++.+ ++|.-+++|..+.
T Consensus         5 VGr~~~~~~~~fVvPd~~r-i~~~I~I~~~~~---~~~~ak~Gd~Vvvei~~~P~~~~~~~~g~I~evlG~~~   73 (90)
T d2ix0a1           5 VGKVQGKNDRLAIVPDHPL-LKDAIPCRAARG---LNHEFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGD   73 (90)
T ss_dssp             EEEEESCSSSEEEEESCTT-CCSCEEEEECTT---CCCCCCTTCEEEEEEEECGGGTCSSCEEEEEEECCCTT
T ss_pred             EEEEEEECCEEEEEECCCC-CCCCCCCCCCCC---CCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCC
T ss_conf             9999996998999859985-366441264324---45567899799999976887789986589989873489

SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Cold shock DNA-binding domain-like
domain: Exoribonuclease 2, RNB
species: Escherichia coli [TaxId: 562]