HHSEARCH alignment of GI: 254780913 and SCOP domain: d2ix0a2

Alignment
>d2ix0a2 b.40.4.5 (A:4-82) Exoribonuclease 2, RNB {Escherichia coli [TaxId: 562]}
Probab=97.52  E-value=5.9e-05  Score=46.05  Aligned_cols=59  Identities=22%  Similarity=0.376  Sum_probs=44.3

Q ss_pred             CCEEEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEECCC
Q ss_conf             762775146887465885488778837999950002358844689988999999869997111059996357
Q gi|254780913|r    4 RGSIKWYNPDKGYGFITPEGSTESGDDVFLHRSAVASAGLFNLTEGQLVTYDYVQNDANGKYSAENLKLVPK   75 (78)
Q Consensus         4 ~G~VKwfn~~kGfGFI~~d~~~d~g~DvFvH~s~i~~~g~~~l~~G~~V~F~i~~~~~~gk~~A~~v~~i~~   75 (78)
                      +|++.-  ..+||||+.||+    ++|||+....+..     .-.|++|...+.  ..++|+.+.-+++|+.
T Consensus        20 ~G~i~~--~~~G~GFv~~d~----~~DifI~~~~~~~-----A~~GD~V~v~i~--~~~~r~eg~I~~ilE~   78 (79)
T d2ix0a2          20 EGVVKA--TEKGFGFLEVDA----QKSYFIPPPQMKK-----VMHGDRIIAVIH--SEKERESAEPEELVEP   78 (79)
T ss_dssp             EEEEEC--CC--CEEEEEET----TEEEEECHHHHTT-----CCTTCEEEEEEE--CC--CCEEEEEEEEEC
T ss_pred             EEEEEE--ECCCCEEEEECC----CCCEEECHHHHCC-----CCCCCEEEEEEE--ECCCCEEEEEEEEECC
T ss_conf             999999--579858998789----9748979799867-----889999999999--5799678999999657


SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Cold shock DNA-binding domain-like
domain: Exoribonuclease 2, RNB
species: Escherichia coli [TaxId: 562]