HHsearch alignment for GI: 254780915 and conserved domain: cd06455

>cd06455 M3A_TOP Peptidase M3 Thimet oligopeptidase (TOP; PZ-peptidase; endo-oligopeptidase A; endopeptidase 24.15; soluble metallo-endopeptidase; EC 3.4.24.15) family also includes neurolysin (endopeptidase 24.16, microsomal endopeptidase, mitochondrial oligopeptidase M, neurotensin endopeptidase, soluble angiotensin II-binding protein, thimet oligopeptidase II) which hydrolyzes oligopeptides such as neurotensin, bradykinin and dynorphin A. TOP and neurolysin are neuropeptidases expressed abundantly in the testis, but also found in the liver, lung and kidney. They are involved in the metabolism of neuropeptides under 20 amino acid residues long and cleave most bioactive peptides at the same sites, but recognize different positions on some naturally occurring and synthetic peptides; they cleave at distinct sites on the 13-residue bioactive peptide neurotensin, which modulates central dopaminergic and cholinergic circuits. TOP has been shown to degrade peptides released by the proteasom
Probab=100.00  E-value=0  Score=507.58  Aligned_cols=379  Identities=17%  Similarity=0.197  Sum_probs=312.7

Q ss_pred             CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC-CHHHHHHHHH
Q ss_conf             752332135418887679999999999865054216999999866678865427899988976222258-9899999999
Q gi|254780915|r  221 IPLTKAYKSFFDSDREVRKSAAKALSHTFNKSSHIFSFITNTLAKDEEIQDRWRKYEKIADSRHLSNNV-EPYVIEALMQ  299 (626)
Q Consensus       221 ~~~~~~~~~l~~~dr~~Rk~a~~a~~~~~~~~~~~~a~il~~iv~~r~e~A~llGy~s~~~~~l~~~~~-~~~~~~~l~~  299 (626)
T Consensus        20 ~~P~y~pvm~~a~~r~lR~~~y~A~~~R~~~---~N~~il~~il~lR~e~A~LLGf~s~A~~~L~~kMA~sp~~V~~fL~   96 (472)
T cd06455          20 KYPDYFPVMKYAKNAETRKAMWVAFQNRGGP---ENVPLLEELVALRHELARLLGYKSHADYVLEDRMAKSPETVRDFLE   96 (472)
T ss_pred             CCCCHHHHHCCCCCHHHHHHHHHHHHHHCHH---HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHH
T ss_conf             8997899973399989999999999632566---4799999999999999997699969999998775699999999999


Q ss_pred             HHHHCCHHHHHHHHHHH----HHHCCC--CCCCHHHHHHCC-----------CCCCCCCCCHHHHHHHHHHHHHH-HHHH
Q ss_conf             87630628999999999----987088--753123444025-----------65547779989999999986666-3289
Q gi|254780915|r  300 SVKNYYPKTSHRYYELK----KKWLKL--DTMYFWDRLAPL-----------PGTSQDIIPFEVARDLVLQSYAK-FSPQ  361 (626)
Q Consensus       300 ~~~~~~~~~~~~~~~~~----~~~lg~--~~l~~wD~~~~~-----------~~~~~~~~~~ee~~~~v~~~~~~-~~~e  361 (626)
T Consensus        97 ~L~~~~~~~a~~E~~~L~~~~~~~~~~~~~~l~pWD~~yy~ek~r~~~~~~d~~~l~~YFpl~~Vl~Glf~l~~~LfGi~  176 (472)
T cd06455          97 DLSKKLKPLAEKELAELLELKKKEVPEAGDRIYPWDLAYYMERVEEEKYDVDQEKIREYFPLEVVIEGMLDIYQRLFGLR  176 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCEE
T ss_conf             99999899999999999999987558776866766799999888887535567774057728999999999999984845


Q ss_pred             HHHHH-------------------HHHHHCCCCCHHCCCCCCCCCCCCCCCCC----------CCCEEECCCCC------
Q ss_conf             99999-------------------98642485020103799874354766677----------75101036533------
Q gi|254780915|r  362 MSIIA-------------------EKFFTHNWIDAPQYDGKGSGAFAHGTIPS----------VHPYILLNYLG------  406 (626)
Q Consensus       362 ~~~~~-------------------~~~~~~~~iD~~~r~gKr~GA~~~~~~~~----------~~~~I~~N~~~------  406 (626)
T Consensus       177 f~~~~~~~~WH~dVr~~~V~d~~~g~~lG~fYlDl~~R~~K~~ga~~~~~~~~~~~~~g~~q~Pv~~lvcNf~~p~~~~p  256 (472)
T cd06455         177 FEEVPDASVWHEDVRLYSVWDADTGEFLGYFYLDLHPREGKYGHAANFGLQPGFLLPDGSRQYPVAALVCNFPKPTADKP  256 (472)
T ss_pred             EEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEECCCEECCCCCEECCEEEEEECCCCCCCCCC
T ss_conf             58778788778765699999889994789998514777777787715652354465899861676899844679999988


Q ss_pred             ---CHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCHHHHHHHHHHHHHHHHH----------HHHHCCCCCHHHHHHHH
Q ss_conf             ---2467999999845899999612-568776578005999886888999999----------99841389989999999
Q gi|254780915|r  407 ---KPQDVMTLAHELGHGIHFVLSS-ETQGILTNNSSLTLAETASIFGETLTF----------DSLLQAASSKEERKILL  472 (626)
Q Consensus       407 ---~~~dv~TL~HE~GHa~H~~ls~-~~~~~~~~~~~~~~aE~~S~~~E~~~~----------~~~~~~~~~~~~~~~ll  472 (626)
T Consensus       257 sLLs~~ev~TlFHEfGHaLH~lLs~~~y~~~sGt~v~~DfVE~PSqlmE~w~~~~~vL~~~a~Hy~Tgeplp~~l~~~l~  336 (472)
T cd06455         257 SLLRHDEVETFFHEFGHVIHHLLGRTKYARFSGTRVERDFVEAPSQMLENWCWEPEVLKRLSKHYKTGEKIPDELIERLI  336 (472)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf             86679999887756748888652376545544765661244286899985457889998531225789989699999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCC-CCCCH
Q ss_conf             99862069999999999999999972120168999899999999999986077634588788850015254106-67525
Q gi|254780915|r  473 ANKIEDMLNSIVRQISFYDFELKLHTERRSTGDIPTHRINEIWLETQKESLGPAFDLSDLEYGSFWMMVPHFIE-SSFYV  551 (626)
Q Consensus       473 ~~~~~~~~~~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~w~~~~H~y~-~~fY~  551 (626)
T Consensus       337 ~a~~~~~g~~~~~ql~~a~~Dl~lH~~~~~--~~---d~~~~~~~~~~~~~~----~~~~~~~~~~~~F~Hi~~gY~AgY  407 (472)
T cd06455         337 ASRHFNRGLFYLRQLFFALFDLALHTGDPA--DL---DTTKLYNDLREEISL----IPSTEGTHGPASFGHLAGGYDAGY  407 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--CC---CHHHHHHHHHHHHCC----CCCCCCCCCCCCCCCHHCCCCCCH
T ss_conf             887564699999999999999998378865--59---999999999997179----999999987873320224855342


Q ss_pred             HHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHH-HHHCCCCCCHHHHHHHC-CCCCCCHHHHHH
Q ss_conf             899999999999999999567--3328999999-98326999979999970-889899889999
Q gi|254780915|r  552 YAYAFGNCLVNSLYDIYKSNT--VDCFKEKYLN-ILRAGNSKHYSELLLPL-NINLSDPNFWER  611 (626)
Q Consensus       552 y~Y~~~~~~a~~l~~~~~~~~--~~~~~~~y~~-~L~~Ggs~~~~el~k~~-G~d~~~~~~~~~  611 (626)
T Consensus       408 YsYlWsevlAaD~~~~f~~~g~~~~e~G~~~r~~iL~~Ggs~~~~e~~~~F~GR~P~~~all~~  471 (472)
T cd06455         408 YGYLWSEVFAADMFSSFFKDGLLNPEVGLRYRDTVLAPGGSKDAADMLKDFLGREPNNDAFLKS  471 (472)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHC
T ss_conf             9999999999999999986399989999999999721789918999999846999981577616