HHsearch alignment for GI: 254780915 and conserved domain: pfam01400
>pfam01400 Astacin Astacin (Peptidase family M12A). The members of this family are enzymes that cleave peptides. These proteases require zinc for catalysis. Members of this family contain two conserved disulphide bridges, these are joined 1-4 and 2-3. Members of this family have an amino terminal propeptide which is cleaved to give the active protease domain. All other linked domains are found to the carboxyl terminus of this domain. This family includes: Astacin, a digestive enzyme from Crayfish. Meprin, a multiple domain membrane component that is constructed from a homologous alpha and beta chain. Proteins involved in morphogenesis, and Tolloid from drosophila.
Probab=92.61 E-value=0.098 Score=30.34 Aligned_cols=68 Identities=16% Similarity=0.088 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCC--------CCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999998666632899999998642485020103799--------87435476667775101036533246799999984
Q gi|254780915|r 347 ARDLVLQSYAKFSPQMSIIAEKFFTHNWIDAPQYDGK--------GSGAFAHGTIPSVHPYILLNYLGKPQDVMTLAHEL 418 (626)
Q Consensus 347 ~~~~v~~~~~~~~~e~~~~~~~~~~~~~iD~~~r~gK--------r~GA~~~~~~~~~~~~I~~N~~~~~~dv~TL~HE~ 418 (626)
T Consensus 20 ~~~~I~~Am~~~~~-----------~TCirF~pr~~~~~~~~i~~~~~~gC~S~vG~~gg~Q~islg~gC~~~g~i~HEl 88 (192)
T pfam01400 20 ARALIRQAMRHWEQ-----------KTCIRFVPRTSAPDNNYLFFFKGDGCYSYVGRNGGAQPVSLGNGCDKFGIIVHEL 88 (192)
T ss_pred HHHHHHHHHHHHHH-----------CCCCEEEECCCCCCCEEEEEECCCCEEEECCEECCEEEEEECCCCCCCCCCHHHH
T ss_conf 99999999999985-----------8875378588898876999943994536247008802588688858677017888
Q ss_pred HHHHHHHH
Q ss_conf 58999996
Q gi|254780915|r 419 GHGIHFVL 426 (626)
Q Consensus 419 GHa~H~~l 426 (626)
T Consensus 89 ~HaL-Gf~ 95 (192)
T pfam01400 89 GHAL-GFW 95 (192)
T ss_pred HHHH-CCC
T ss_conf 8884-555