HHsearch results for GI: 254780915 and protein with PDBid: 3ce2_A
>3ce2_A Putative peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.60A {Chlamydophila abortus S26}
Probab=100.00 E-value=0 Score=855.25 Aligned_cols=596 Identities=23% Similarity=0.358 Sum_probs=547.6
Q ss_pred CHHHCCCCHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 01321878443424776793572788892789999999999999999997423310233499899999999999999999
Q gi|254780915|r 22 SDMTTMDSQENLGNLPRWNLEDLYPSHDSQEISNDMECIEHESLAFKTRWEGNLAHATNQKNCHSLGAAIAEYERICELI 101 (626)
Q Consensus 22 ~~~~~~~~r~~~~~~~~WdL~~ly~~~~~~e~~~dl~~~~~~i~~~~~~~~~~l~~~~~~~~~~~l~~~l~~~e~i~~~l 101 (626)
..++++|+|++||++|+|||++||+|.++|+ .+++.++..+..+. .+++.........++++|.++|..+|++...+
T Consensus 7 ~~~~~~~~r~~i~~~~~WdL~~ly~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~l~s~~~l~~~l~~~e~i~~~l 83 (618)
T 3ce2_A 7 FNKQQVRPRSEISPQDCWDITPLYLNRKAWK--ADLDSFGLKTDGSP-TWPALQATQYQLDNSESLLSLLTTLFSIERKL 83 (618)
T ss_dssp ----CCCCGGGSCGGGSCCCTTTCSSHHHHH--HHHHHTCCC---CC-SCSTTCGGGCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCHHHCCCHHHHH--HHHHHHHHHHHHHH-HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 2225698801299222768466479858999--99999999999899-88998753323699999999999999999999
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 99999998642057991899999999999999999988741698871998999999846900111179999999742331
Q gi|254780915|r 102 GRIASYAMLSYNCNLSSPTIRKFYTDINAKLADFEKVLIFFALEINTLDEALLEQSYAQDPLTLKYSAWIKNIRKIKKHL 181 (626)
Q Consensus 102 ~rv~~ya~l~~s~dt~d~~~~~~~~~~~~~~s~~~~~l~~~~~e~~~l~e~~l~~~~~~~~~l~~y~~~~~~l~~~~~~~ 181 (626)
+++++|++|..++|++|++++++.++++++.+++++.++++++++.+++++.+..++. ++.++.|++++.++++.++|.
T Consensus 84 ~~l~~Ya~l~~s~dt~d~~~~~~~~~~~~l~s~~~~~l~~~~~el~~l~e~~~~~~l~-~~~L~~y~~~l~~~~~~~~~~ 162 (618)
T 3ce2_A 84 NKLYVYAHLTHDQDITNQEGIADLKSITHLHTLFAEETSWVQPALTSLSESLIAQHLS-APCLAPYRFYLEKIFRLSIHT 162 (618)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHTTTHHHHHHTSCHHHHHHHHH-CSTTGGGHHHHHHHHTTGGGC
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999778844488899999999999999999999999999998489999999861-915345489999999888741
Q ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH----HHHCCCCCHH--HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 716799876630010003677777764444332----2100347523--3213541888767999999999986505421
Q gi|254780915|r 182 LSNDMECLLSDTSQVGREALKRFFCENIESLRF----KINDQKIPLT--KAYKSFFDSDREVRKSAAKALSHTFNKSSHI 255 (626)
Q Consensus 182 l~~~~E~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~l~~~dr~~Rk~a~~a~~~~~~~~~~~ 255 (626)
+++.+|++++..+..++.++..+.....++..+ ...|+..+++ ....++.++||++|+++|+++.+++.+++.+
T Consensus 163 ls~~~E~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~G~~~~L~~~~~~~~~~s~Dr~~R~~a~~a~~~~~~~~~~~ 242 (618)
T 3ce2_A 163 GTPGEEKILASAFTPLEVASKAFSSLSDSEIPFGQATDSEGNSHPLSHALASLYMQSTDRELRKTSYLAQCERYHSYRHT 242 (618)
T ss_dssp CCHHHHHHHHHHTTGGGHHHHHHHHHHHTTSCCCEEECSSCCEEECCHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 11235899998524321078999998763555331015688178604766765401889999999999999999855688
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
Q ss_conf 69999998666788654278999889762222589899999999876306289999999999870887531234440256
Q gi|254780915|r 256 FSFITNTLAKDEEIQDRWRKYEKIADSRHLSNNVEPYVIEALMQSVKNYYPKTSHRYYELKKKWLKLDTMYFWDRLAPLP 335 (626)
Q Consensus 256 ~a~il~~iv~~r~e~A~llGy~s~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lg~~~l~~wD~~~~~~ 335 (626)
++.+++++++.|.+.|+++||+|++++++..+++++.+++.+...+.. ..|..+++...+++.+|++.+++||+++|.+
T Consensus 243 ~a~il~~~v~~r~~~A~~~gy~~~~~~~l~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~lg~~~l~~~D~~~~~~ 321 (618)
T 3ce2_A 243 FANLLNGKIQAHVFYAKNKRYNSCLQAALYHNNIPTTVYTNLIDIVKK-NSSLITKYFSIKQRCLNLKDFHFYDVYAPLS 321 (618)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSSHHHHHHTTTTCCHHHHHHHHHHHHT-THHHHHHHHHHHHHHHTCSSCBGGGTTCCSC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 999999999889999987699988999998732227899999999998-5678999999999870811043341257787
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHH
Q ss_conf 554777998999999998666632899999998-6424850201037998743547666777510103653324679999
Q gi|254780915|r 336 GTSQDIIPFEVARDLVLQSYAKFSPQMSIIAEK-FFTHNWIDAPQYDGKGSGAFAHGTIPSVHPYILLNYLGKPQDVMTL 414 (626)
Q Consensus 336 ~~~~~~~~~ee~~~~v~~~~~~~~~e~~~~~~~-~~~~~~iD~~~r~gKr~GA~~~~~~~~~~~~I~~N~~~~~~dv~TL 414 (626)
....+.+++++++++|..++.+++++|.+.+.. +.+++|+|+++|+||+|||||++.+ .++|+|+|||+++++||.||
T Consensus 322 ~~~~~~~~~~ea~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~K~~ga~~~~~~-~~~p~I~~N~~~~~~dv~TL 400 (618)
T 3ce2_A 322 QSKEKKYTFQEAVDLIYTSLSPLGTEYIDTLKQGLTTQGWVDKYENLNKRSGAYSSGCY-DSHPYVLLNYTGTLYDVSVI 400 (618)
T ss_dssp C--CCCCCHHHHHHHHHHHTGGGHHHHHHHHHHHHHTSCCEECSCCTTCCCSCEEECCT-TSCCEEECCCCSSHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCC-CCCCEEEECCCCCCCCHHHH
T ss_conf 66668899999999998888886699999999765301102201336788886657777-88870220467764208899
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99845899999612568776578005999886888999999998413899899999999986206999999999999999
Q gi|254780915|r 415 AHELGHGIHFVLSSETQGILTNNSSLTLAETASIFGETLTFDSLLQAASSKEERKILLANKIEDMLNSIVRQISFYDFEL 494 (626)
Q Consensus 415 ~HE~GHa~H~~ls~~~~~~~~~~~~~~~aE~~S~~~E~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~q~~~~~fe~ 494 (626)
|||||||+|++++++++|+.++++|+++||+|||+||+|+++|++++..+++.+..++..++.+...++++|++++.||+
T Consensus 401 ~HE~GHa~H~~l~~~~~~~~~~~~~~~~aE~~S~~~E~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~fe~ 480 (618)
T 3ce2_A 401 AHEGGHSMHSYFSRKHQPFHDAQYPIFLAEIASTLNEMLLMDSMLKESDSKEEKITILTRCLDTIFSTLFRQVLFASFEY 480 (618)
T ss_dssp HHHHHHHHHHHHHHHHSCGGGCSCCGGGTTHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98517799999984136620367870899997766778899888765389999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 99721201689998999999999999860776345887888500152541066752589999999999999999956733
Q gi|254780915|r 495 KLHTERRSTGDIPTHRINEIWLETQKESLGPAFDLSDLEYGSFWMMVPHFIESSFYVYAYAFGNCLVNSLYDIYKSNTVD 574 (626)
Q Consensus 495 ~~h~~~~~~~~~t~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~w~~~~H~y~~~fY~y~Y~~~~~~a~~l~~~~~~~~~~ 574 (626)
++|..+.+++++|+++++++|.+++++|+|+.+++++ ..+++|++||||| .|||||+|+||+|+|+++|.+++++| +
T Consensus 481 ~~~~~~~~~~~lt~~~~~~~~~~l~~~~~g~~~~~~~-~~~~~W~~~~Hf~-~~fY~y~Y~~~~l~a~~l~~~~~~~~-~ 557 (618)
T 3ce2_A 481 DIHHAAEHGVPLTEEYLSSTYKNLQNEFYGEIITFDV-LSNIEWARIPHFY-YNFYVYQYATGIIAALCFLEKILNNE-D 557 (618)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHHHHHHTTTCBCCT-TGGGGGGGSCGGG-CSSCTHHHHHHHHHHHHHHHHHHTTC-T
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC-CCCCEEEECCCEE-ECCCCHHHHHHHHHHHHHHHHHHHCC-H
T ss_conf 9998586268999999999999999997199777788-7687231225076-68708699999999999999999788-8
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 2899999998326999979999970889899889999999999999998609
Q gi|254780915|r 575 CFKEKYLNILRAGNSKHYSELLLPLNINLSDPNFWERGLQTVEKMIDDVEKM 626 (626)
Q Consensus 575 ~~~~~y~~~L~~Ggs~~~~el~k~~G~d~~~~~~~~~~~~~~~~~i~~~e~l 626 (626)
.++++|+++|+.|||++|.|++|.+|+|+++++||+.+++.++++|+|+|+|
T Consensus 558 ~~~~~y~~~L~~Ggs~~~~el~~~~G~d~~~~~~~~~~~~~~~~~i~e~~~l 609 (618)
T 3ce2_A 558 NALNSYLNFLKSGGSDFPLEILKKSGLDMGTVEPIQKAFCFIEKKIQELSSL 609 (618)
T ss_dssp THHHHHHHHHTTTTSSCHHHHHHHTTCCTTSSHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999997271899999999984989887699999999999999999998