HHsearch results for GI: 254780915 and protein with PDBid: 3o0y_A

>3o0y_A Lipoprotein; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, lipid protein; 1.70A {Colwellia psychrerythraea}
Probab=95.39  E-value=0.13  Score=28.04  Aligned_cols=164  Identities=15%  Similarity=0.061  Sum_probs=94.0

Q ss_pred             CHHHHHHHHHHH--HHHHHHHHHCCCC--CCC-CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             246799999984--5899999612568--776-57800599988688899999999841389989999999998620699
Q gi|254780915|r  407 KPQDVMTLAHEL--GHGIHFVLSSETQ--GIL-TNNSSLTLAETASIFGETLTFDSLLQAASSKEERKILLANKIEDMLN  481 (626)
Q Consensus       407 ~~~dv~TL~HE~--GHa~H~~ls~~~~--~~~-~~~~~~~~aE~~S~~~E~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~  481 (626)
                      .+....|.+||.  ||-++..++..+.  |.. .......++|==....|.+..++-.-. .++..+...|...+...  
T Consensus       429 ~~~~~~l~~HE~~PGHh~Q~~~~~e~~~~~~~r~~~~~~~~~EGWAlYaE~l~~e~g~~~-~dp~~~lg~l~~~l~ra--  505 (609)
T 3o0y_A          429 KFGLKTLTYHEANPGHHWQIALNLDQAELPFLRRIAPYNAYTEGWALYSEQVAYELGMYE-NDPFGDLGRLQAELFRA--  505 (609)
T ss_dssp             GGGHHHHHHHHSTTTHHHHHHHHHTCTTSCHHHHTCCCHHHHHHHHHHHHHHHHHTTTTT-TCHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHH--
T ss_conf             577778899850378899999998615883898871674577559999998898736567-98899999999999999--


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             99999999999999972120168999899999999999986077634588788850015254106675258999999999
Q gi|254780915|r  482 SIVRQISFYDFELKLHTERRSTGDIPTHRINEIWLETQKESLGPAFDLSDLEYGSFWMMVPHFIESSFYVYAYAFGNCLV  561 (626)
Q Consensus       482 ~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~w~~~~H~y~~~fY~y~Y~~~~~~a  561 (626)
                            .....|..+|..     ..|.++-.+.|.+    ..|.    .+......|.+.   ...|.++-+|.+|++.=
T Consensus       506 ------~RlvvD~glH~~-----gws~e~A~~~~~~----~~~~----~~~~a~~ev~Ry---~~~Pgqa~sY~~G~l~i  563 (609)
T 3o0y_A          506 ------VRLVVDTGLHDK-----RWTREQAISYMSE----QTGT----AESDVVAEIERY---MAWPGQALGYKLGMLKI  563 (609)
T ss_dssp             ------HHHHHHHHHHTS-----CCCHHHHHHHHHH----HHCC----CHHHHHHHHHHH---HHSTTGGGHHHHHHHHH
T ss_pred             ------HHHHHHHHHCCC-----CCCHHHHHHHHHH----HCCC----CHHHHHHHHHHH---HHCCHHHHHHHHHHHHH
T ss_conf             ------999953524037-----9999999999998----1699----859999999999---83928799999999999


Q ss_pred             HHHHHHHHHCCCHHH--HHHHHHHHHCCCCCCHHHHHH
Q ss_conf             999999995673328--999999983269999799999
Q gi|254780915|r  562 NSLYDIYKSNTVDCF--KEKYLNILRAGNSKHYSELLL  597 (626)
Q Consensus       562 ~~l~~~~~~~~~~~~--~~~y~~~L~~Ggs~~~~el~k  597 (626)
                      .+|-...++.-.+.|  .++-..+|+.|..  |..+++
T Consensus       564 ~~LR~~a~~~lG~~Fdlk~FHd~vL~~G~~--Pl~~l~  599 (609)
T 3o0y_A          564 LSLREQAKARLGDKFDLAEFHDVVLLNGAV--PMAVLS  599 (609)
T ss_dssp             HHHHHHHHHHHGGGCCHHHHHHHHHTTCSC--CHHHHH
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHCCCC--CHHHHH
T ss_conf             999999999858889999999999967999--899999