Query         gi|254780915|ref|YP_003065328.1| oligoendopeptidase F [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 626
No_of_seqs    186 out of 1997
Neff          9.3 
Searched_HMMs 23785
Date          Tue May 31 23:41:55 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780915.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3ce2_A Putative peptidase; str 100.0       0       0  855.2  57.5  596   22-626     7-609 (618)
  2 2qr4_A Peptidase M3B, oligoend 100.0       0       0  779.1  55.2  569   47-626     2-576 (587)
  3 3ahn_A Oligopeptidase, PZ pept 100.0       0       0  675.1  52.5  542   57-625    13-561 (564)
  4 1y79_1 Peptidyl-dipeptidase DC 100.0       0       0  553.5  37.9  539   65-611    32-675 (680)
  5 2o3e_A Neurolysin; thermolysin 100.0       0       0  561.1  28.7  543   35-611    23-675 (678)
  6 2o36_A ThiMet oligopeptidase;  100.0       0       0  536.3  28.3  545   36-611     8-659 (674)
  7 1uze_A Angiotensin converting  100.0       0       0  458.7  41.5  511   82-623     3-570 (589)
  8 2x96_A Angiotensin converting  100.0       0       0  450.7  47.0  511   86-623     8-580 (598)
  9 1r42_A Angiotensin I convertin 100.0       0       0  416.6  42.7  508   83-622    21-597 (615)
 10 3nxq_A Angiotensin-converting  100.0       0       0  389.6  48.1  514   81-623    11-584 (629)
 11 3dwc_A TCMCP-1, metallocarboxy  99.9 3.7E-23 1.6E-27  181.6  34.1  337  238-610   109-494 (505)
 12 1ka2_A M32 carboxypeptidase; h  99.9 2.9E-18 1.2E-22  146.8  37.4  336  237-611   111-492 (499)
 13 3hq2_A Bacillus subtilis M32 c  99.9 9.1E-19 3.8E-23  150.3  30.0  334  238-611   110-489 (501)
 14 3hoa_A Thermostable carboxypep  99.8 1.5E-14 6.3E-19  120.2  33.6  336  236-611   110-499 (509)
 15 3iuk_A Uncharacterized protein  96.9   0.025   1E-06   33.1  20.7  168  407-597   379-558 (562)
 16 3o0y_A Lipoprotein; structural  95.4    0.13 5.3E-06   28.0  20.9  164  407-597   429-599 (609)
 17 1j7n_A Lethal factor precursor  94.3   0.053 2.2E-06   30.7   4.8   18  409-426   679-696 (776)
 18 3lqb_A Hatching enzyme, LOC792  93.3   0.083 3.5E-06   29.3   4.2   17  409-426    92-108 (199)
 19 1atl_A Atrolysin C; metalloend  93.0    0.18 7.5E-06   26.9   5.7   41  382-422   105-148 (202)
 20 1qua_A Acutolysin-C, hemorrhag  93.0   0.066 2.8E-06   30.0   3.4   40  383-422   106-147 (197)
 21 3edh_A Bone morphogenetic prot  92.8    0.17 7.1E-06   27.1   5.2   39  387-426    63-102 (201)
 22 3lq0_A Proastacin; metallopept  91.9   0.069 2.9E-06   29.9   2.3   39  386-426    95-135 (235)
 23 3g5c_A ADAM 22; alpha/beta fol  91.6    0.13 5.5E-06   27.9   3.5   38  385-422   109-146 (510)
 24 1c7k_A NCNP, zinc endoprotease  91.6   0.066 2.8E-06   30.0   2.0   29  394-422    59-89  (132)
 25 1kuf_A Atrolysin E, metallopro  91.3    0.12 4.9E-06   28.3   3.0   36  387-422   113-150 (203)
 26 3k7l_A Atragin; SVMP, metallop  90.8    0.19 8.1E-06   26.7   3.7   39  384-422   115-156 (422)
 27 2w15_A Zinc metalloproteinase   90.1    0.17 7.2E-06   27.1   2.9   36  387-422   111-148 (202)
 28 3b8z_A Protein adamts-5; alpha  90.1    0.15 6.1E-06   27.6   2.6   39  383-422   115-153 (217)
 29 1hy7_A Stromelysin-1, MMP-3; m  89.7    0.11 4.6E-06   28.4   1.7   15  408-422   111-125 (173)
 30 1qib_A Protein (gelatinase A);  89.5    0.13 5.3E-06   28.0   1.9   16  408-423   107-122 (161)
 31 1r55_A ADAM 33; metalloproteas  89.3    0.22 9.3E-06   26.3   3.0   36  387-422   111-148 (214)
 32 2xs4_A Karilysin protease; hyd  89.2    0.14 5.7E-06   27.8   1.9   13  410-422   115-127 (167)
 33 1hv5_A Stromelysin 3; inhibiti  89.1     0.1 4.4E-06   28.6   1.2   13  410-422   113-125 (165)
 34 2v4b_A Adamts-1; zinc, zymogen  89.1    0.26 1.1E-05   25.8   3.2   40  385-426   119-158 (300)
 35 1bud_A Protein (acutolysin A);  89.0    0.28 1.2E-05   25.5   3.4   37  386-422   107-145 (197)
 36 1i76_A MMP-8;, neutrophil coll  89.0    0.16 6.8E-06   27.3   2.1   15  408-422   110-124 (163)
 37 2e3x_A Coagulation factor X-ac  88.9    0.48   2E-05   23.9   4.5   41  385-426   112-154 (427)
 38 3bon_A Neurotoxin A; metallopr  88.8    0.91 3.8E-05   21.9   5.9   61  408-468   215-279 (425)
 39 1rm8_A MMP-16, matrix metallop  88.8    0.14 5.9E-06   27.7   1.7   15  408-422   115-129 (169)
 40 2jsd_A Matrix metalloproteinas  88.8    0.14 5.9E-06   27.7   1.7   13  410-422   108-120 (160)
 41 3dte_A IRRE protein; radiotole  88.8    0.35 1.5E-05   24.9   3.7   37  382-423    72-109 (301)
 42 3ma2_D Matrix metalloproteinas  88.7    0.12 4.9E-06   28.3   1.2   15  408-422   120-134 (181)
 43 3k7n_A K-like; SVMP, hydrolase  88.6     0.3 1.2E-05   25.4   3.2   39  387-426   114-154 (397)
 44 1mmq_A Matrilysin; metalloprot  88.2    0.16 6.9E-06   27.2   1.7   15  408-422   112-126 (170)
 45 1yp1_A FII; FII hydrolase; 1.9  88.0    0.31 1.3E-05   25.2   3.1   39  387-426   110-150 (202)
 46 1cge_A Fibroblast collagenase;  88.0    0.16 6.8E-06   27.3   1.6   15  408-422   109-123 (168)
 47 1y93_A Macrophage metalloelast  88.0    0.15 6.1E-06   27.6   1.4   14  409-422   107-120 (159)
 48 2ovx_A Matrix metalloproteinas  87.9    0.15 6.3E-06   27.5   1.4   14  409-422   110-123 (159)
 49 2a97_A BONT/F, botulinum neuro  87.9     1.1 4.5E-05   21.4   5.9   70  408-477   219-292 (439)
 50 1zb7_A Neurotoxin; hexxh metal  87.8    0.36 1.5E-05   24.8   3.3   64  408-471   222-288 (455)
 51 1g9k_A Serralysin; beta jelly   87.4    0.42 1.8E-05   24.3   3.4   13  410-422   163-175 (463)
 52 2ero_A VAP-1, vascular apoptos  87.3    0.36 1.5E-05   24.8   3.0   37  387-423   121-159 (427)
 53 2dw0_A Catrocollastatin; apopt  86.9    0.46 1.9E-05   24.0   3.4   42  384-426   109-152 (419)
 54 830c_A MMP-13, MMP-13; matrix   86.6     0.2 8.4E-06   26.6   1.4   17  407-423   110-126 (168)
 55 2rjp_A Adamts-4; metalloprotea  86.4    0.46   2E-05   24.0   3.2   34  387-422   121-155 (316)
 56 3ba0_A Macrophage metalloelast  85.8    0.27 1.1E-05   25.7   1.7   14  409-422   106-119 (365)
 57 1kap_P Alkaline protease; calc  85.8    0.27 1.1E-05   25.7   1.7   13  410-422   179-191 (479)
 58 3p1v_A Metallo-endopeptidase;   85.7    0.45 1.9E-05   24.1   2.8   50  374-431   258-307 (407)
 59 2ddf_A ADAM 17; hydrolase; HET  85.2    0.28 1.2E-05   25.6   1.6   19  407-426   179-197 (257)
 60 2rjq_A Adamts-5; metalloprotea  85.1    0.56 2.3E-05   23.4   3.1   36  386-422   120-155 (378)
 61 1su3_A Interstitial collagenas  85.1    0.26 1.1E-05   25.8   1.4   16  407-422   190-205 (450)
 62 1slm_A Stromelysin-1; hydrolas  85.0    0.26 1.1E-05   25.7   1.4   21  339-359   105-125 (255)
 63 1k7i_A PROC, secreted protease  84.1    0.36 1.5E-05   24.8   1.7   13  410-422   182-194 (479)
 64 3c37_A Peptidase, M48 family;   84.0    0.18 7.6E-06   26.9   0.2   50  376-428    65-118 (253)
 65 2cki_A Ulilysin; metalloprotea  83.9    0.29 1.2E-05   25.5   1.2   15  408-422   160-174 (262)
 66 3cqb_A Probable protease HTPX   80.2    0.54 2.3E-05   23.5   1.5   48  376-424    45-97  (107)
 67 1bqb_A Protein (aureolysin); h  79.3     1.1 4.8E-05   21.2   2.9   21  408-428   136-156 (301)
 68 2i47_A ADAM 17; TACE-inhibitor  78.7    0.65 2.7E-05   22.9   1.5   20  406-426   184-203 (288)
 69 1z7h_A Tetanus toxin light cha  78.3    0.94 3.9E-05   21.8   2.2   22  408-429   229-250 (447)
 70 3b4r_A Putative zinc metallopr  78.3    0.81 3.4E-05   22.2   1.9   18  411-428    49-66  (224)
 71 1t3c_A Neurotoxin type E; cata  78.0    0.98 4.1E-05   21.7   2.2   22  408-429   203-224 (421)
 72 1epw_A Bontoxilysin B, botulin  77.6     1.9 7.9E-05   19.6   3.6   18  438-455   700-717 (1290)
 73 2qn0_A Neurotoxin; botulism, s  76.9     1.1 4.6E-05   21.3   2.2   22  408-429   221-242 (430)
 74 2fpq_A Botulinum neurotoxin D   73.9     1.5 6.2E-05   20.4   2.2   22  408-429   229-250 (444)
 75 3dnz_A Thermolysin; hydrolase,  73.8     1.9   8E-05   19.6   2.8   22  407-428   133-154 (316)
 76 1e1h_A BONT/A LC, botulinum ne  73.4     1.5 6.4E-05   20.3   2.2   22  408-429   252-273 (287)
 77 1ck7_A Protein (gelatinase A);  73.0     1.2 4.9E-05   21.1   1.5   27  409-435   367-393 (631)
 78 1sat_A Serratia protease; para  70.2     1.6 6.7E-05   20.2   1.7   13  410-422   170-182 (471)
 79 1l6j_A Matrix metalloproteinas  69.4     1.2 5.2E-05   20.9   1.0   16  408-423   374-389 (425)
 80 3ffz_A Botulinum neurotoxin ty  68.1     2.3 9.8E-05   19.0   2.2   18  438-455   686-703 (1252)
 81 3khi_A Putative metal-dependen  65.2     4.8  0.0002   16.7   4.6   49  409-457   143-193 (267)
 82 1eak_A 72 kDa type IV collagen  65.1       2 8.4E-05   19.5   1.4   14  409-422   365-378 (421)
 83 2di4_A Zinc protease, cell div  64.8     4.2 0.00018   17.1   3.0   22  411-432    17-38  (238)
 84 3nqx_A MCP-02, secreted metall  63.0     2.7 0.00011   18.6   1.7   19  409-427   134-152 (306)
 85 2ejq_A Hypothetical protein TT  62.6     3.5 0.00015   17.7   2.2   13  411-423    90-102 (130)
 86 2nyy_A Botulinum neurotoxin ty  61.9     3.6 0.00015   17.6   2.2   16  439-454   714-729 (1295)
 87 1lml_A Leishmanolysin; metallo  56.3     5.2 0.00022   16.5   2.2   13  410-422   159-171 (478)
 88 3csk_A Probable dipeptidyl-pep  54.6     2.6 0.00011   18.7   0.4   47  406-452   450-518 (711)
 89 2kkm_A Translation machinery-a  53.8     7.4 0.00031   15.4   3.3   66  339-414    42-127 (144)
 90 2x7m_A Archaemetzincin; metall  48.3     5.6 0.00024   16.2   1.4   50  369-422    93-151 (195)
 91 3fvy_A Dipeptidyl-peptidase 3;  45.6     5.7 0.00024   16.2   1.0   49  114-162    84-133 (728)
 92 2dhr_A FTSH; AAA+ protein, hex  43.5     9.5  0.0004   14.6   1.9   21  412-432   289-309 (499)
 93 1g12_A Peptidyl-Lys metalloend  42.8      11 0.00045   14.2   3.4   17  405-421   106-122 (167)
 94 2vqx_A Metalloproteinase; ther  41.3      11 0.00048   14.1   5.7   20  409-428   155-174 (341)
 95 3lmc_A Peptidase, zinc-depende  41.3     8.4 0.00035   15.0   1.4   15  409-423   142-156 (210)
 96 2ce7_A Cell division protein F  38.7      12 0.00052   13.8   2.9   22  411-432   273-294 (476)
 97 1u4g_A Elastase, pseudolysin;   36.3      14 0.00057   13.5   4.9   21  408-428   132-152 (301)
 98 1mw5_A Hypothetical protein HI  32.9      15 0.00064   13.2   1.6   20  407-426    19-38  (187)
 99 3e11_A Predicted zincin-like m  27.5      19 0.00078   12.5   1.4   20  402-421    77-101 (114)
100 3b73_A PHIH1 repressor-like pr  25.8      20 0.00084   12.3   4.3   26  579-604    17-42  (111)
101 1bm4_A Protein (moloney murine  22.0      23 0.00098   11.8   1.6   17  442-458    11-27  (32)
102 2q12_A DIP13 alpha, DCC-intera  21.6      24   0.001   11.8  12.7  107   47-159    13-120 (265)

No 1  
>3ce2_A Putative peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.60A {Chlamydophila abortus S26}
Probab=100.00  E-value=0  Score=855.25  Aligned_cols=596  Identities=23%  Similarity=0.358  Sum_probs=547.6

Q ss_pred             CHHHCCCCHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             01321878443424776793572788892789999999999999999997423310233499899999999999999999
Q gi|254780915|r   22 SDMTTMDSQENLGNLPRWNLEDLYPSHDSQEISNDMECIEHESLAFKTRWEGNLAHATNQKNCHSLGAAIAEYERICELI  101 (626)
Q Consensus        22 ~~~~~~~~r~~~~~~~~WdL~~ly~~~~~~e~~~dl~~~~~~i~~~~~~~~~~l~~~~~~~~~~~l~~~l~~~e~i~~~l  101 (626)
                      ..++++|+|++||++|+|||++||+|.++|+  .+++.++..+..+. .+++.........++++|.++|..+|++...+
T Consensus         7 ~~~~~~~~r~~i~~~~~WdL~~ly~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~l~s~~~l~~~l~~~e~i~~~l   83 (618)
T 3ce2_A            7 FNKQQVRPRSEISPQDCWDITPLYLNRKAWK--ADLDSFGLKTDGSP-TWPALQATQYQLDNSESLLSLLTTLFSIERKL   83 (618)
T ss_dssp             ----CCCCGGGSCGGGSCCCTTTCSSHHHHH--HHHHHTCCC---CC-SCSTTCGGGCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHCCCCCCCCCCCCCCCCCHHHCCCHHHHH--HHHHHHHHHHHHHH-HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             2225698801299222768466479858999--99999999999899-88998753323699999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf             99999998642057991899999999999999999988741698871998999999846900111179999999742331
Q gi|254780915|r  102 GRIASYAMLSYNCNLSSPTIRKFYTDINAKLADFEKVLIFFALEINTLDEALLEQSYAQDPLTLKYSAWIKNIRKIKKHL  181 (626)
Q Consensus       102 ~rv~~ya~l~~s~dt~d~~~~~~~~~~~~~~s~~~~~l~~~~~e~~~l~e~~l~~~~~~~~~l~~y~~~~~~l~~~~~~~  181 (626)
                      +++++|++|..++|++|++++++.++++++.+++++.++++++++.+++++.+..++. ++.++.|++++.++++.++|.
T Consensus        84 ~~l~~Ya~l~~s~dt~d~~~~~~~~~~~~l~s~~~~~l~~~~~el~~l~e~~~~~~l~-~~~L~~y~~~l~~~~~~~~~~  162 (618)
T 3ce2_A           84 NKLYVYAHLTHDQDITNQEGIADLKSITHLHTLFAEETSWVQPALTSLSESLIAQHLS-APCLAPYRFYLEKIFRLSIHT  162 (618)
T ss_dssp             HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHTTTHHHHHHTSCHHHHHHHHH-CSTTGGGHHHHHHHHTTGGGC
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999778844488899999999999999999999999999998489999999861-915345489999999888741


Q ss_pred             CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH----HHHCCCCCHH--HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             716799876630010003677777764444332----2100347523--3213541888767999999999986505421
Q gi|254780915|r  182 LSNDMECLLSDTSQVGREALKRFFCENIESLRF----KINDQKIPLT--KAYKSFFDSDREVRKSAAKALSHTFNKSSHI  255 (626)
Q Consensus       182 l~~~~E~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~l~~~dr~~Rk~a~~a~~~~~~~~~~~  255 (626)
                      +++.+|++++..+..++.++..+.....++..+    ...|+..+++  ....++.++||++|+++|+++.+++.+++.+
T Consensus       163 ls~~~E~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~G~~~~L~~~~~~~~~~s~Dr~~R~~a~~a~~~~~~~~~~~  242 (618)
T 3ce2_A          163 GTPGEEKILASAFTPLEVASKAFSSLSDSEIPFGQATDSEGNSHPLSHALASLYMQSTDRELRKTSYLAQCERYHSYRHT  242 (618)
T ss_dssp             CCHHHHHHHHHHTTGGGHHHHHHHHHHHTTSCCCEEECSSCCEEECCHHHHHHHHTCSCHHHHHHHHHHHHHHHHTTHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             11235899998524321078999998763555331015688178604766765401889999999999999999855688


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
Q ss_conf             69999998666788654278999889762222589899999999876306289999999999870887531234440256
Q gi|254780915|r  256 FSFITNTLAKDEEIQDRWRKYEKIADSRHLSNNVEPYVIEALMQSVKNYYPKTSHRYYELKKKWLKLDTMYFWDRLAPLP  335 (626)
Q Consensus       256 ~a~il~~iv~~r~e~A~llGy~s~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lg~~~l~~wD~~~~~~  335 (626)
                      ++.+++++++.|.+.|+++||+|++++++..+++++.+++.+...+.. ..|..+++...+++.+|++.+++||+++|.+
T Consensus       243 ~a~il~~~v~~r~~~A~~~gy~~~~~~~l~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~lg~~~l~~~D~~~~~~  321 (618)
T 3ce2_A          243 FANLLNGKIQAHVFYAKNKRYNSCLQAALYHNNIPTTVYTNLIDIVKK-NSSLITKYFSIKQRCLNLKDFHFYDVYAPLS  321 (618)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCSSHHHHHHTTTTCCHHHHHHHHHHHHT-THHHHHHHHHHHHHHHTCSSCBGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf             999999999889999987699988999998732227899999999998-5678999999999870811043341257787


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHH
Q ss_conf             554777998999999998666632899999998-6424850201037998743547666777510103653324679999
Q gi|254780915|r  336 GTSQDIIPFEVARDLVLQSYAKFSPQMSIIAEK-FFTHNWIDAPQYDGKGSGAFAHGTIPSVHPYILLNYLGKPQDVMTL  414 (626)
Q Consensus       336 ~~~~~~~~~ee~~~~v~~~~~~~~~e~~~~~~~-~~~~~~iD~~~r~gKr~GA~~~~~~~~~~~~I~~N~~~~~~dv~TL  414 (626)
                      ....+.+++++++++|..++.+++++|.+.+.. +.+++|+|+++|+||+|||||++.+ .++|+|+|||+++++||.||
T Consensus       322 ~~~~~~~~~~ea~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~K~~ga~~~~~~-~~~p~I~~N~~~~~~dv~TL  400 (618)
T 3ce2_A          322 QSKEKKYTFQEAVDLIYTSLSPLGTEYIDTLKQGLTTQGWVDKYENLNKRSGAYSSGCY-DSHPYVLLNYTGTLYDVSVI  400 (618)
T ss_dssp             C--CCCCCHHHHHHHHHHHTGGGHHHHHHHHHHHHHTSCCEECSCCTTCCCSCEEECCT-TSCCEEECCCCSSHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCC-CCCCEEEECCCCCCCCHHHH
T ss_conf             66668899999999998888886699999999765301102201336788886657777-88870220467764208899


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99845899999612568776578005999886888999999998413899899999999986206999999999999999
Q gi|254780915|r  415 AHELGHGIHFVLSSETQGILTNNSSLTLAETASIFGETLTFDSLLQAASSKEERKILLANKIEDMLNSIVRQISFYDFEL  494 (626)
Q Consensus       415 ~HE~GHa~H~~ls~~~~~~~~~~~~~~~aE~~S~~~E~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~q~~~~~fe~  494 (626)
                      |||||||+|++++++++|+.++++|+++||+|||+||+|+++|++++..+++.+..++..++.+...++++|++++.||+
T Consensus       401 ~HE~GHa~H~~l~~~~~~~~~~~~~~~~aE~~S~~~E~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~fe~  480 (618)
T 3ce2_A          401 AHEGGHSMHSYFSRKHQPFHDAQYPIFLAEIASTLNEMLLMDSMLKESDSKEEKITILTRCLDTIFSTLFRQVLFASFEY  480 (618)
T ss_dssp             HHHHHHHHHHHHHHHHSCGGGCSCCGGGTTHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             98517799999984136620367870899997766778899888765389999999999999999999999999999999


Q ss_pred             HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf             99721201689998999999999999860776345887888500152541066752589999999999999999956733
Q gi|254780915|r  495 KLHTERRSTGDIPTHRINEIWLETQKESLGPAFDLSDLEYGSFWMMVPHFIESSFYVYAYAFGNCLVNSLYDIYKSNTVD  574 (626)
Q Consensus       495 ~~h~~~~~~~~~t~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~w~~~~H~y~~~fY~y~Y~~~~~~a~~l~~~~~~~~~~  574 (626)
                      ++|..+.+++++|+++++++|.+++++|+|+.+++++ ..+++|++||||| .|||||+|+||+|+|+++|.+++++| +
T Consensus       481 ~~~~~~~~~~~lt~~~~~~~~~~l~~~~~g~~~~~~~-~~~~~W~~~~Hf~-~~fY~y~Y~~~~l~a~~l~~~~~~~~-~  557 (618)
T 3ce2_A          481 DIHHAAEHGVPLTEEYLSSTYKNLQNEFYGEIITFDV-LSNIEWARIPHFY-YNFYVYQYATGIIAALCFLEKILNNE-D  557 (618)
T ss_dssp             HHHHHHHTTCCCCHHHHHHHHHHHHHHHHTTTCBCCT-TGGGGGGGSCGGG-CSSCTHHHHHHHHHHHHHHHHHHTTC-T
T ss_pred             HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC-CCCCEEEECCCEE-ECCCCHHHHHHHHHHHHHHHHHHHCC-H
T ss_conf             9998586268999999999999999997199777788-7687231225076-68708699999999999999999788-8


Q ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             2899999998326999979999970889899889999999999999998609
Q gi|254780915|r  575 CFKEKYLNILRAGNSKHYSELLLPLNINLSDPNFWERGLQTVEKMIDDVEKM  626 (626)
Q Consensus       575 ~~~~~y~~~L~~Ggs~~~~el~k~~G~d~~~~~~~~~~~~~~~~~i~~~e~l  626 (626)
                      .++++|+++|+.|||++|.|++|.+|+|+++++||+.+++.++++|+|+|+|
T Consensus       558 ~~~~~y~~~L~~Ggs~~~~el~~~~G~d~~~~~~~~~~~~~~~~~i~e~~~l  609 (618)
T 3ce2_A          558 NALNSYLNFLKSGGSDFPLEILKKSGLDMGTVEPIQKAFCFIEKKIQELSSL  609 (618)
T ss_dssp             THHHHHHHHHTTTTSSCHHHHHHHTTCCTTSSHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999997271899999999984989887699999999999999999998


No 2  
>2qr4_A Peptidase M3B, oligoendopeptidase F; structural genomics, PSI-2, protein structure initiative; 2.50A {Enterococcus faecium DO}
Probab=100.00  E-value=0  Score=779.08  Aligned_cols=569  Identities=24%  Similarity=0.380  Sum_probs=527.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf             88927899999999999999999974233102334998999999999999999999999999864205799189999999
Q gi|254780915|r   47 SHDSQEISNDMECIEHESLAFKTRWEGNLAHATNQKNCHSLGAAIAEYERICELIGRIASYAMLSYNCNLSSPTIRKFYT  126 (626)
Q Consensus        47 ~~~~~e~~~dl~~~~~~i~~~~~~~~~~l~~~~~~~~~~~l~~~l~~~e~i~~~l~rv~~ya~l~~s~dt~d~~~~~~~~  126 (626)
                      +.++++|.++++++++.+.++. +++|+|..     ++++|.++|+++|+++..++++++|++|..++|++|+.++++.+
T Consensus         2 ~~sd~~~e~~~~~l~~~i~~~~-~~~~~l~~-----~~~~~~~~i~~~e~~~~~l~~~~~ya~l~~s~dt~d~~~~~~~~   75 (587)
T 2qr4_A            2 SLSDQEFDEKYLELSEELKQSE-KHKGTLDQ-----GASQFLNAIEFVLRVYRQTEVIYVYAHLKNDQDTGNTDYQALYA   75 (587)
T ss_dssp             -CHHHHHHHHHHHHHHHGGGHH-HHTTCGGG-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH-HHHHHHCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf             9998999999999999999999-99742358-----99999999999999999999999999855410478599999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf             99999999999887416988719989999998469001111799999997423317167998766300100036777777
Q gi|254780915|r  127 DINAKLADFEKVLIFFALEINTLDEALLEQSYAQDPLTLKYSAWIKNIRKIKKHLLSNDMECLLSDTSQVGREALKRFFC  206 (626)
Q Consensus       127 ~~~~~~s~~~~~l~~~~~e~~~l~e~~l~~~~~~~~~l~~y~~~~~~l~~~~~~~l~~~~E~~l~~~~~~~~~~~~~~~~  206 (626)
                      +++++++++++.++++++++.+++++.+..++.++++|+.|+..+.++++..++.+++..|+++...+.....++.....
T Consensus        76 ~~~~l~~~~~~~~~~~~~el~~l~e~~l~~~~~~~~~L~~~~~~l~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~~~~  155 (587)
T 2qr4_A           76 RASSLFSKVSEAVSWFEPEILQLSDDQIWQYFKEEPKLEVYRHYIQQIVDNRAHVLSAEQESLLAGAGEIFDASSDTFAV  155 (587)
T ss_dssp             HHHHHHHHHHHHTTTHHHHHTTSCHHHHHHHHHHCGGGGGGHHHHHHHHTTGGGCCCHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHH
T ss_conf             99999999999998888999837999999998659647889999999998634005088899999864520103778899


Q ss_pred             HHHHHHHHH------HHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf             644443322------10034752332135418887679999999999865054216999999866678865427899988
Q gi|254780915|r  207 ENIESLRFK------INDQKIPLTKAYKSFFDSDREVRKSAAKALSHTFNKSSHIFSFITNTLAKDEEIQDRWRKYEKIA  280 (626)
Q Consensus       207 ~~~~~~~~~------~~~~~~~~~~~~~~l~~~dr~~Rk~a~~a~~~~~~~~~~~~a~il~~iv~~r~e~A~llGy~s~~  280 (626)
                      ....+....      ......+.+....+.+++||++|+++|+++.+++.++..+++.++++++++|.+.|+++||+|++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~dr~~R~~~~~a~~~~~~~~~~~~~~il~~~~~~r~~~A~l~Gy~~~a  235 (587)
T 2qr4_A          156 LNNADLVFPTIEGENGEIVQLSHGVYGQLLESTDRRVREAAFKGLYSVYEQFRNTFASTLGTHIKGHNFKAKVRNYSSAR  235 (587)
T ss_dssp             HHHTTCCCCEEECTTSCEEECCHHHHHHHHTCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTCSSHH
T ss_pred             HHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf             87676520023046760564268789988759578899999999999998471778999999999999999745999889


Q ss_pred             HHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             97622225898999999998763062899999999998708875312344402565547779989999999986666328
Q gi|254780915|r  281 DSRHLSNNVEPYVIEALMQSVKNYYPKTSHRYYELKKKWLKLDTMYFWDRLAPLPGTSQDIIPFEVARDLVLQSYAKFSP  360 (626)
Q Consensus       281 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lg~~~l~~wD~~~~~~~~~~~~~~~ee~~~~v~~~~~~~~~  360 (626)
                      ++++..++++..++..+. .+.....+.++++...+++.+|++.+++||+.++..+...+.++++++.+.+...+.++++
T Consensus       236 ~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (587)
T 2qr4_A          236 EASLSNNHIPESVYDTLV-DVVNKHLPLLHRYMELRKRLLEVEKLHMYDLYTPVLGEAPITFTYEEAKEKALEALKPMGE  314 (587)
T ss_dssp             HHHHHTTTCCHHHHHHHH-HHHHHTHHHHHHHHHHHHHHHTCSSBCGGGSSSCSSCCCCC-----CCHHHHHHHTGGGHH
T ss_pred             HHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             999886436188887499-9999866999999999999839962221033057776656778889999999975412337


Q ss_pred             HHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
Q ss_conf             99999998642485020103799874354766677751010365332467999999845899999612568776578005
Q gi|254780915|r  361 QMSIIAEKFFTHNWIDAPQYDGKGSGAFAHGTIPSVHPYILLNYLGKPQDVMTLAHELGHGIHFVLSSETQGILTNNSSL  440 (626)
Q Consensus       361 e~~~~~~~~~~~~~iD~~~r~gKr~GA~~~~~~~~~~~~I~~N~~~~~~dv~TL~HE~GHa~H~~ls~~~~~~~~~~~~~  440 (626)
                      +|.+++++++..+|+|.++|+||++||||++.+ .++|+|+||++++++||.|||||||||+|+++++..+|+.++++++
T Consensus       315 ~~~~~~~~~~~~~~~d~~~~~~k~~g~~~~~~~-~~~p~i~~n~~~s~ddv~TLfHEfGHalH~lls~~~~~~~~~~~~~  393 (587)
T 2qr4_A          315 EYMAIVEKAFSERWIDVVENKGKRSGAYSSGSY-DTNPYILLNWHDTLDQLFTLVHEMGHSVHSYFTRSNQPYVYGDYSI  393 (587)
T ss_dssp             HHHHC-----------------------------------------CHHHHHHHHHHHHHHHHHHHC------------C
T ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCH
T ss_conf             999999999754873447789998777137877-7886413577775788999999716999999970578853477763


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf             99988688899999999841389989999999998620699999999999999999721201689998999999999999
Q gi|254780915|r  441 TLAETASIFGETLTFDSLLQAASSKEERKILLANKIEDMLNSIVRQISFYDFELKLHTERRSTGDIPTHRINEIWLETQK  520 (626)
Q Consensus       441 ~~aE~~S~~~E~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~~~~~~  520 (626)
                      ||||+||||||+|||||++.++.+++++..++.+++.+.+.++.+|+.++.||+.+|+.+..++.+|+++++++|.++++
T Consensus       394 d~vE~pSq~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  473 (587)
T 2qr4_A          394 FLAEIASTTNENILTEYLLETEKDPRVRAYVLNHYLDGFKGTVFRQTQFAEFEHFMHTEDEKGVPLTSEYLSDSYGKLNA  473 (587)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf             78779899999999977652226988999999968888998998857999999999997531478999999999999999


Q ss_pred             HHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHCC
Q ss_conf             86077634588788850015254106675258999999999999999995673328999999983269999799999708
Q gi|254780915|r  521 ESLGPAFDLSDLEYGSFWMMVPHFIESSFYVYAYAFGNCLVNSLYDIYKSNTVDCFKEKYLNILRAGNSKHYSELLLPLN  600 (626)
Q Consensus       521 ~~~g~~~~~~~~~~~~~w~~~~H~y~~~fY~y~Y~~~~~~a~~l~~~~~~~~~~~~~~~y~~~L~~Ggs~~~~el~k~~G  600 (626)
                      +|+|+.++.+ +..+++|++|+||| +|||||+|+||+|+|+++|.+++++| ++++++|++||+.|||++|.|++|.||
T Consensus       474 ~~~g~~~~~~-~~~~~~w~~~~H~~-~~~YyysY~~~~v~a~~~~~~~~~~~-~~~~~~y~~~L~~Ggs~~~~e~~k~~G  550 (587)
T 2qr4_A          474 KYYGPAVEED-PEIKFEWSRIPHFY-YNYYVFQYSTGFSAASALAKKILNQE-PEALENYLAYLKAGNSDYPVEVMKKAG  550 (587)
T ss_dssp             HHHCTTBCCC-GGGGGGGGGCGGGG-SSSCTHHHHHHHHHHHHHHHHHHTTC-TTHHHHHHHHHHHCSCSCHHHHHHHTT
T ss_pred             HHCCCCCCCC-CCCCCEEEECCEEE-ECCCCHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHCCCCCCHHHHHHHCC
T ss_conf             9749986658-98686154508374-69855999999999999999999768-889999999971749999999999839


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             89899889999999999999998609
Q gi|254780915|r  601 INLSDPNFWERGLQTVEKMIDDVEKM  626 (626)
Q Consensus       601 ~d~~~~~~~~~~~~~~~~~i~~~e~l  626 (626)
                      +|+++|+||+++++.|+++|||||+|
T Consensus       551 ~d~~~~~~~~~~~~~~~~~i~e~~~l  576 (587)
T 2qr4_A          551 VDMTQAAYIEDAMSMFEQRLNELEEL  576 (587)
T ss_dssp             CCTTSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99998899999999999999999999


No 3  
>3ahn_A Oligopeptidase, PZ peptidase A; hydrolase; HET: 3A1; 1.80A {Geobacillus SP} PDB: 3ahm_A* 2h1n_A 2h1j_A
Probab=100.00  E-value=0  Score=675.14  Aligned_cols=542  Identities=15%  Similarity=0.175  Sum_probs=447.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999999742331023349989999999999999999999999998642057991899999999999999999
Q gi|254780915|r   57 MECIEHESLAFKTRWEGNLAHATNQKNCHSLGAAIAEYERICELIGRIASYAMLSYNCNLSSPTIRKFYTDINAKLADFE  136 (626)
Q Consensus        57 l~~~~~~i~~~~~~~~~~l~~~~~~~~~~~l~~~l~~~e~i~~~l~rv~~ya~l~~s~dt~d~~~~~~~~~~~~~~s~~~  136 (626)
                      ++++++.+.++.+.+       ....+++++.++|.+++++.+.++++.+|+++..++|++|+.+++..+.+....++++
T Consensus        13 ~e~~~~~~~~~~~~~-------~~~~s~~~~~~~l~~~e~~~~~l~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~~~~l~   85 (564)
T 3ahn_A           13 IEKLKASFQQALQSF-------QKASNAEEQNEAMKEINQLRNDFSTMAQICYIRHTIDTNDEFYKQEQDFFDEVEPIVK   85 (564)
T ss_dssp             HHHHHHHHHHHHHHH-------HTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH-------HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999998-------7079999999999999999999999999999998012787999999999999999999


Q ss_pred             HHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             98874169887199899999984690011117999999974233171679987663001000367777776444433221
Q gi|254780915|r  137 KVLIFFALEINTLDEALLEQSYAQDPLTLKYSAWIKNIRKIKKHLLSNDMECLLSDTSQVGREALKRFFCENIESLRFKI  216 (626)
Q Consensus       137 ~~l~~~~~e~~~l~e~~l~~~~~~~~~l~~y~~~~~~l~~~~~~~l~~~~E~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (626)
                      .....+...+..-+.  ...+.      ..+...+....+...+.++++.........     .+........+..+...
T Consensus        86 ~~~~~~~~~ll~~~~--~~~l~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~l~~~~~~~~~~~~~~~  152 (564)
T 3ahn_A           86 GLVNDYYRALVSSPF--RSQLE------GKWGKQLFALAEAELKTYSPDIVEDLQLEN-----KLTSEYTKLVASAKIFF  152 (564)
T ss_dssp             HHHHHHHHHHHTCTT--HHHHH------HHHCTHHHHHHHHHHTTCCGGGHHHHHHHH-----HHHHHHHHHHHTCCEEE
T ss_pred             HHHHHHHHHHHCCHH--HHHHH------HHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-----HHHHHHHHHHHHCEECC
T ss_conf             999999999864844--67888------988999998788755523276699889999-----99999999987276112


Q ss_pred             HCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC---CCCHHH
Q ss_conf             00347523321354188876799999999998650542169999998666788654278999889762222---589899
Q gi|254780915|r  217 NDQKIPLTKAYKSFFDSDREVRKSAAKALSHTFNKSSHIFSFITNTLAKDEEIQDRWRKYEKIADSRHLSN---NVEPYV  293 (626)
Q Consensus       217 ~~~~~~~~~~~~~l~~~dr~~Rk~a~~a~~~~~~~~~~~~a~il~~iv~~r~e~A~llGy~s~~~~~l~~~---~~~~~~  293 (626)
                      .|+..+++....++.++||++|+++|+++.+++.+++++++.++++++++|.+.|+++||+|++++.+..+   .++...
T Consensus       153 ~g~~lt~~~~~~~l~~~dr~~R~~~~~a~~~~~~~~~~~~~~~l~~~v~~r~~~A~l~Gy~~~~~~~l~~~~~~~~~~~~  232 (564)
T 3ahn_A          153 EGEERTLAQLQPFVESPDRDMRKRASEARFTFFQEHEEKFDEIYDQLVKVRTAIAQKLGFKNFVELGYARLGRTDYNAEM  232 (564)
T ss_dssp             TTEEECTGGGHHHHTCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHTTCCSCCHHH
T ss_pred             CCEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHH
T ss_conf             89885277667877488879999999999999851133499999999999999999849874026899874079988999


Q ss_pred             HHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             999999876306289999999999870887531234440256-5547779989999999986666328999999986424
Q gi|254780915|r  294 IEALMQSVKNYYPKTSHRYYELKKKWLKLDTMYFWDRLAPLP-GTSQDIIPFEVARDLVLQSYAKFSPQMSIIAEKFFTH  372 (626)
Q Consensus       294 ~~~l~~~~~~~~~~~~~~~~~~~~~~lg~~~l~~wD~~~~~~-~~~~~~~~~ee~~~~v~~~~~~~~~e~~~~~~~~~~~  372 (626)
                      +..++..+..+..+..+++...+++.+|.+++++||+.++.+ ....+.++++++.+.+...+..++++++++++.++++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~wD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  312 (564)
T 3ahn_A          233 VAKFRKQVEKHIVPIAVKLRERQRERIGVEKLKYYDEAFVFPTGNPMPKGDANWIIENGKKMYEELSPETGEFFRYMIEH  312 (564)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHTCSSCCTTTTTCCCTTCCCCCSSCHHHHHHHHHHHHHHHCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHC
T ss_conf             99999999998689999999999987698233222344778512258868799999999999998477899999999864


Q ss_pred             CCCCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             85020103799874354766677751010365332467999999845899999612568776578005999886888999
Q gi|254780915|r  373 NWIDAPQYDGKGSGAFAHGTIPSVHPYILLNYLGKPQDVMTLAHELGHGIHFVLSSETQGILTNNSSLTLAETASIFGET  452 (626)
Q Consensus       373 ~~iD~~~r~gKr~GA~~~~~~~~~~~~I~~N~~~~~~dv~TL~HE~GHa~H~~ls~~~~~~~~~~~~~~~aE~~S~~~E~  452 (626)
                      +|+|++||+||||||||++++++++|+|+|||+++++||.|||||||||+|+|++++++++.++++++||||+|||+||+
T Consensus       313 ~~iD~~~r~gK~~gA~~~~~~~~~~~~i~~N~~~~~~dv~TL~HE~GHalH~~l~~~~~~~~~t~~~~d~~E~~S~~~E~  392 (564)
T 3ahn_A          313 ELMDLVAKKGKASGGYCTYIENYKAPFIFSNFTGTSGDIDVLTHEAGHAFQVYESRHYEIPEYNWPTLEACEIHSMSMEF  392 (564)
T ss_dssp             TCEEEECCTTCCSSCEEEEEGGGTEEEEEEEECSSTHHHHHHHHHHHHHHHHHHTTTCSSGGGSSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHH
T ss_conf             87104478898787843177998876520167898146889998750999999984154110378986223404068999


Q ss_pred             HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC-
Q ss_conf             9999984138998999999999862069999999999999999972120168999899999999999986077634588-
Q gi|254780915|r  453 LTFDSLLQAASSKEERKILLANKIEDMLNSIVRQISFYDFELKLHTERRSTGDIPTHRINEIWLETQKESLGPAFDLSD-  531 (626)
Q Consensus       453 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~~~~~~~~~g~~~~~~~-  531 (626)
                      ||++|+.....++..  ..+..++.....++.+|++++.|+..+|...    ..++++++++|.++.+++.|....... 
T Consensus       393 ~~~~~l~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~f~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~  466 (564)
T 3ahn_A          393 FTWPWMKLFFKEDAE--KYQFYHLSDALLFLPYGVAVDEFQHFVYENP----NATPAERKQAWRAIERKYMPTKDYDGND  466 (564)
T ss_dssp             HTGGGHHHHHGGGHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT----TCCHHHHHHHHHHHHHHHSTTCCCTTCH
T ss_pred             HHHHHHHHHCCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             999999876566437--8999999999999999999999999985313----1587789879999999976765455765


Q ss_pred             -CCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC-CCHHHH
Q ss_conf             -788850015254106675258999999999999999995673328999999983269999799999708898-998899
Q gi|254780915|r  532 -LEYGSFWMMVPHFIESSFYVYAYAFGNCLVNSLYDIYKSNTVDCFKEKYLNILRAGNSKHYSELLLPLNINL-SDPNFW  609 (626)
Q Consensus       532 -~~~~~~w~~~~H~y~~~fY~y~Y~~~~~~a~~l~~~~~~~~~~~~~~~y~~~L~~Ggs~~~~el~k~~G~d~-~~~~~~  609 (626)
                       ...+.+|++|||||.+|||||+|+||+|+|+++|.+++++| +.++++|++||+.|||++|.|++|.||++. +++++|
T Consensus       467 ~~~~~~~w~~~~H~~~~~~Yyy~Y~~~~v~a~~~~~~~~~~~-~~a~~~y~~~L~~Ggs~~~~el~k~~g~~~~~~~~~l  545 (564)
T 3ahn_A          467 YLERGGFWQRQSHIYTTAFYYIDYTLAQICAFQFWKRSRENY-KEAWNDYLTLCRQGGSKPFTELVRVANLISPFEDGCV  545 (564)
T ss_dssp             HHHTTCGGGGCHHHHHSTTTTHHHHHHHHHHHHHHHHHHHCH-HHHHHHHHHHHTTTTSSCHHHHHHHTTCCCTTSTTHH
T ss_pred             CCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHH
T ss_conf             545686510136012799716999999999999999998778-9999999999608499989999987599999989999


Q ss_pred             HHHHHHHHHHHHHHHC
Q ss_conf             9999999999999860
Q gi|254780915|r  610 ERGLQTVEKMIDDVEK  625 (626)
Q Consensus       610 ~~~~~~~~~~i~~~e~  625 (626)
                      +.+++.++++||++|.
T Consensus       546 ~~~~~~~~~~l~~~e~  561 (564)
T 3ahn_A          546 QSVVGGIEGWLNSVDD  561 (564)
T ss_dssp             HHHHHHHHHHHTTSCG
T ss_pred             HHHHHHHHHHHHHHHH
T ss_conf             9999999999998753


No 4  
>1y79_1 Peptidyl-dipeptidase DCP; hinge bending, carboxypeptidase, neurolysin, ACE, hydrolase; HET: TRP; 2.00A {Escherichia coli}
Probab=100.00  E-value=0  Score=553.46  Aligned_cols=539  Identities=14%  Similarity=0.066  Sum_probs=385.7

Q ss_pred             HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999974233102334998999999999999999999999999864205799189999999999999999998874169
Q gi|254780915|r   65 LAFKTRWEGNLAHATNQKNCHSLGAAIAEYERICELIGRIASYAMLSYNCNLSSPTIRKFYTDINAKLADFEKVLIFFAL  144 (626)
Q Consensus        65 ~~~~~~~~~~l~~~~~~~~~~~l~~~l~~~e~i~~~l~rv~~ya~l~~s~dt~d~~~~~~~~~~~~~~s~~~~~l~~~~~  144 (626)
                      .+..++.+..+..|..+.++++|+|+|.++|+++..++++.+.++...+++++ +++++...++.+.++++.+.+.....
T Consensus        32 ~~~i~~~~~~i~~I~~~~~~~tf~nti~~le~~~~~L~r~~~~~~~L~sv~~~-~elr~a~~~~~~~ls~~~~~i~~n~~  110 (680)
T 1y79_1           32 DEGMQQKRAEIAAIALNPQMPDFNNTILALEQSGELLTRVTSVFFAMTAAHTN-DELQRLDEQFSAELAELANDIYLNGE  110 (680)
T ss_dssp             HHHHHHHHHHHHHHTTSSSSCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHSCC-HHHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf             99999999999999839999999999999999728999999999998706999-99999999999999999988755799


Q ss_pred             HHHHCCHHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH----------------------------H
Q ss_conf             88719989999998---4690011117999999974233171679987663----------------------------0
Q gi|254780915|r  145 EINTLDEALLEQSY---AQDPLTLKYSAWIKNIRKIKKHLLSNDMECLLSD----------------------------T  193 (626)
Q Consensus       145 e~~~l~e~~l~~~~---~~~~~l~~y~~~~~~l~~~~~~~l~~~~E~~l~~----------------------------~  193 (626)
                      ...++.. ..+.-.   ..++..+-....+.+..+...+.-.++.+++...                            .
T Consensus       111 Ly~~lk~-l~~~~~~~~L~~e~~r~l~~~l~dF~~~G~~L~~~~r~r~~~l~~els~L~~~F~~nv~~a~~~~~~~~~~~  189 (680)
T 1y79_1          111 LFARVDA-VWQRRESLGLDSESIRLVEVIHQRFVLAGAKLAQADKAKLKVLNTEAATLTSQFNQRLLAANKSGGLVVNDI  189 (680)
T ss_dssp             HHHHHHH-HHHTTTTSCCCHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEESCG
T ss_pred             HHHHHHH-HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCH
T ss_conf             9999999-980766469999999999999999998356899689999999999999999999987555531440113768


Q ss_pred             HHHCCCHHHHHHHHH-HHHHHHHHHCCCC---CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHH
Q ss_conf             010003677777764-4443322100347---5233213541888767999999999986505-4216999999866678
Q gi|254780915|r  194 SQVGREALKRFFCEN-IESLRFKINDQKI---PLTKAYKSFFDSDREVRKSAAKALSHTFNKS-SHIFSFITNTLAKDEE  268 (626)
Q Consensus       194 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~l~~~dr~~Rk~a~~a~~~~~~~~-~~~~a~il~~iv~~r~  268 (626)
                      ++..+.+........ .+.......+...   ..+..+.+.+++||++|+++|.|+.+++.++ ..+|..++.+|+++|.
T Consensus       190 ~eL~Glp~~~~~~~~~~a~~~~~~~~~~i~l~~p~~~~vL~~~~~~~lRk~~y~A~~~R~~~~~~~dN~~il~~il~lR~  269 (680)
T 1y79_1          190 AQLAGMSEQEIALAAEAAREKGLDNKWLIPLLNTTQQPALAEMRDRATREKLFIAGWTRAEKNDANDTRAIIQRLVEIRA  269 (680)
T ss_dssp             GGGTTSCHHHHHHHHHHHHHTTCTTCEEECCCSSSSCGGGGTCCCHHHHHHHHHHHHTTTCSSSTTCCHHHHHHHHHHHH
T ss_pred             HHHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
T ss_conf             87358987899999999885275886699546875229988557789999999999744034787536999999999999


Q ss_pred             HHHHHCCCCCHHHHHHHHCCC-CHHHHHHHHHHHHHCCHHHHHHHHHH----HHHHCCCCCCCHHHHHHCC---------
Q ss_conf             865427899988976222258-98999999998763062899999999----9987088753123444025---------
Q gi|254780915|r  269 IQDRWRKYEKIADSRHLSNNV-EPYVIEALMQSVKNYYPKTSHRYYEL----KKKWLKLDTMYFWDRLAPL---------  334 (626)
Q Consensus       269 e~A~llGy~s~~~~~l~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~lg~~~l~~wD~~~~~---------  334 (626)
                      +.|+++||+||+++++..+|+ +++.+..++..+.....|.+.+.+..    +++..|...+.|||+.++.         
T Consensus       270 e~A~LLGy~syA~~~l~~kMA~spe~V~~FL~~L~~~~~p~a~~El~~L~~~~~~~~~~~~l~pWD~~Yy~~~~r~~~~~  349 (680)
T 1y79_1          270 QQATLLGFPHYAAWKIADQMAKTPEAALNFMREIVPAARQRASDELASIQAVIDKQQGGFSAQPWDWAFYAEQVRREKFD  349 (680)
T ss_dssp             HHHHHTTCSSHHHHHHTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCCHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf             99997498839999887664368687999999999887665799999999999982588778876899999999875424


Q ss_pred             --CCCCCCCCCHHHHH-HHHHHHHH-HHHHHHHHH------------------HHHHHHCCCCCHHCCCCCCCCCCCCCC
Q ss_conf             --65547779989999-99998666-632899999------------------998642485020103799874354766
Q gi|254780915|r  335 --PGTSQDIIPFEVAR-DLVLQSYA-KFSPQMSII------------------AEKFFTHNWIDAPQYDGKGSGAFAHGT  392 (626)
Q Consensus       335 --~~~~~~~~~~ee~~-~~v~~~~~-~~~~e~~~~------------------~~~~~~~~~iD~~~r~gKr~GA~~~~~  392 (626)
                        ..+..++||.+.+. +++....+ .||..+.+.                  -...++..|+|+|+|+||++||||+++
T Consensus       350 ~d~~~l~~YFpl~~v~~~Gl~~l~~~Lfgi~f~e~~~~~~wh~dV~~~~v~d~~~~~lG~~YlDl~~R~~K~~~a~~~~~  429 (680)
T 1y79_1          350 LDEAQLKPYFELNTVLNEGVFWTANQLFGIKFVERFDIPVYHPDVRVWEIFDHNGVGLALFYGDFFARDSKSGGAWMGNF  429 (680)
T ss_dssp             CCGGGTGGGCBHHHHHHHTHHHHHHHHHCCEEEEESSSCCSSTTCEEEEEECTTSCEEEEEEEEEECCTTSCSSCEEEEE
T ss_pred             CCHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCC
T ss_conf             45678876153988999999999999745465765888754687069999803895121688613665568787620253


Q ss_pred             CCC-------CCCEEECCCCC---------CHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             677-------75101036533---------2467999999845899999612-568776578005999886888999999
Q gi|254780915|r  393 IPS-------VHPYILLNYLG---------KPQDVMTLAHELGHGIHFVLSS-ETQGILTNNSSLTLAETASIFGETLTF  455 (626)
Q Consensus       393 ~~~-------~~~~I~~N~~~---------~~~dv~TL~HE~GHa~H~~ls~-~~~~~~~~~~~~~~aE~~S~~~E~~~~  455 (626)
                      +++       +...++|||+.         ++++|+|||||||||||++|++ +++.++|+++++||||+|||+||+|||
T Consensus       430 ~~~~~~~~~~Pv~~lv~nf~~p~~~~p~lL~~~ev~TlFHEfGH~lH~lls~~~y~~~sGt~~~~DfvE~pSql~E~~~~  509 (680)
T 1y79_1          430 VEQSTLNKTHPVIYNVCNYQKPAAGEPALLLWDDVITLFHEFGHTLHGLFARQRYATLSGTNTPRDFVEFPSQINEHWAT  509 (680)
T ss_dssp             ECCBTTTTBCCEEEEEEEECCCCTTSCCBCCHHHHHHHHHHHHHHHHHHTCCCSSGGGSTTCSCHHHHHHHHHHHHHGGG
T ss_pred             CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHH
T ss_conf             24466678786257761467999998875679999987677889999887167745356756315776362999988651


Q ss_pred             H----------HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             9----------984138998999999999862069999999999999999972120168999899999999999986077
Q gi|254780915|r  456 D----------SLLQAASSKEERKILLANKIEDMLNSIVRQISFYDFELKLHTERRSTGDIPTHRINEIWLETQKESLGP  525 (626)
Q Consensus       456 ~----------~~~~~~~~~~~~~~ll~~~~~~~~~~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~~~~~~~~~g~  525 (626)
                      +          |.+++++|+++..+++..+..+.+..+.+|+.+++||+.+|.........+.+.+.  ..++.+++.+ 
T Consensus       510 ~~~vL~~~s~h~~t~e~lp~~l~~~l~~~~~~~~~~~~~~ql~~a~~Dl~lH~~~~~~~~~~~~~~~--~~~~~~~~~~-  586 (680)
T 1y79_1          510 HPQVFARYARHYQSGAAMPDELQQKMRNASLFNKGYEMSELLSAALLDMRWHCLEENEAMQDVDDFE--LRALVAENMD-  586 (680)
T ss_dssp             SHHHHHHHCBCTTTCCBCCHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHTTCCGGGCCCCHHHHH--HHHHHHTTCC-
T ss_pred             CHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH--HHHHHHHCCC-
T ss_conf             4677502455667778882999998998740100899999999999879984689632224657999--9999985278-


Q ss_pred             CCCCCCCCCCCEEECCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHCC--CHHHHHHHHH-HHHCCCCCCHHHHHHHC-
Q ss_conf             634588788850015254106675--25899999999999999999567--3328999999-98326999979999970-
Q gi|254780915|r  526 AFDLSDLEYGSFWMMVPHFIESSF--YVYAYAFGNCLVNSLYDIYKSNT--VDCFKEKYLN-ILRAGNSKHYSELLLPL-  599 (626)
Q Consensus       526 ~~~~~~~~~~~~w~~~~H~y~~~f--Y~y~Y~~~~~~a~~l~~~~~~~~--~~~~~~~y~~-~L~~Ggs~~~~el~k~~-  599 (626)
                         ++.....++.++|+|+|.+||  -||+|.|++++|+++|..|+++|  +++.+++|++ ||+.|||++|.++++.| 
T Consensus       587 ---~~~~~~~~~~~~F~Hl~~ggY~A~YYsYlws~v~aad~~~~f~~~~~~~~~~G~~~r~~iL~~Ggs~~~~~~~~~Fl  663 (680)
T 1y79_1          587 ---LPAIPPRYRSSYFAHIFGGGYAAGYYAYLWTQMLADDGYQWFVEQGGLTRENGLRFREAILSRGNSEDLERLYRQWR  663 (680)
T ss_dssp             ---BTTBCCSSCGGGCHHHHTSSCTTTTHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTTTTSSCHHHHHHHHH
T ss_pred             ---CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHC
T ss_conf             ---89999988898476223688057679999999999999999986499989999999998701789827999999847


Q ss_pred             CCCCCCHHHHHH
Q ss_conf             889899889999
Q gi|254780915|r  600 NINLSDPNFWER  611 (626)
Q Consensus       600 G~d~~~~~~~~~  611 (626)
                      |.+++...|++.
T Consensus       664 GR~p~~~a~l~~  675 (680)
T 1y79_1          664 GKAPKIMPMLQH  675 (680)
T ss_dssp             SSCCCSHHHHHH
T ss_pred             CCCCCHHHHHHH
T ss_conf             999974799986


No 5  
>2o3e_A Neurolysin; thermolysin-like domain, substrate-binding channel, hydrolase; 2.20A {Rattus norvegicus} PDB: 1i1i_P
Probab=100.00  E-value=0  Score=561.11  Aligned_cols=543  Identities=15%  Similarity=0.130  Sum_probs=383.7

Q ss_pred             CCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             4776793572788892789999999999999999997423310233-499899999999999999999999999986420
Q gi|254780915|r   35 NLPRWNLEDLYPSHDSQEISNDMECIEHESLAFKTRWEGNLAHATN-QKNCHSLGAAIAEYERICELIGRIASYAMLSYN  113 (626)
Q Consensus        35 ~~~~WdL~~ly~~~~~~e~~~dl~~~~~~i~~~~~~~~~~l~~~~~-~~~~~~l~~~l~~~e~i~~~l~rv~~ya~l~~s  113 (626)
                      ..+|||++.       .+       ++..+.++.++.+..+..|.. ..+.++|+|+|.++++++..++++.+.+.+..+
T Consensus        23 ~~lr~~~tp-------e~-------i~~~~~~~i~~~~~~~d~I~~~~~~~~Tfenti~~le~~~~~l~~~~~~~~~l~~   88 (678)
T 2o3e_A           23 NVLRWDLSP-------EQ-------IKTRTEQLIAQTKQVYDTVGTIALKEVTYENCLQVLADIEVTYIVERTMLDFPQH   88 (678)
T ss_dssp             CCCCSCCCH-------HH-------HHHHHHHHHHHHHHHHHHHTTSCGGGCCTTTTHHHHHHHHHHHHHHHHHHHSHHH
T ss_pred             CCCCCCCCH-------HH-------HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             867677898-------99-------9999999999989999999768988999999999999976799999999989871


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH---HHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf             57991899999999999999999988741698871998999999---846900111179999999742331716799876
Q gi|254780915|r  114 CNLSSPTIRKFYTDINAKLADFEKVLIFFALEINTLDEALLEQS---YAQDPLTLKYSAWIKNIRKIKKHLLSNDMECLL  190 (626)
Q Consensus       114 ~dt~d~~~~~~~~~~~~~~s~~~~~l~~~~~e~~~l~e~~l~~~---~~~~~~l~~y~~~~~~l~~~~~~~l~~~~E~~l  190 (626)
                      ++ +|++.++...++.+.++++...+........++..- .+.-   ....+..+-....+.+..+...+.-.+..+++.
T Consensus        89 v~-~d~elr~a~~~~~~~l~~~~~~i~~n~~Ly~~l~~l-~~~~~~~~L~~e~~r~le~~~~df~~~G~~L~~~~r~r~~  166 (678)
T 2o3e_A           89 VS-SDREVRAASTEADKKLSRFDIEMSMREDVFQRIVHL-QETCDLEKIKPEARRYLEKSIKMGKRNGLHLSEHIRNEIK  166 (678)
T ss_dssp             HC-SCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH-HHHCCTTSSCHHHHHHHHHHHHHHHHTTTTSCHHHHHHTH
T ss_pred             CC-CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH-HHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf             59-999999999999999999999876689999999999-8086534799999999999999999757899989999999


Q ss_pred             HHHHH-------------------------HCCCHHHHHHHHHHHHHHHHHHCCCCC---HHHHHHHHHCCCHHHHHHHH
Q ss_conf             63001-------------------------000367777776444433221003475---23321354188876799999
Q gi|254780915|r  191 SDTSQ-------------------------VGREALKRFFCENIESLRFKINDQKIP---LTKAYKSFFDSDREVRKSAA  242 (626)
Q Consensus       191 ~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~dr~~Rk~a~  242 (626)
                      ....+                         ..+.+......    ..+....+...+   .+..+.+.+++||++|+++|
T Consensus       167 ~l~~els~L~~~F~~nl~~~~~~~~~~~~eL~Glp~~~l~~----~~~~~~~~~~itl~~p~~~~vl~~~~~~~lRk~~~  242 (678)
T 2o3e_A          167 SMKKRMSELCIDFNKNLNEDDTSLVFSKAELGALPDDFIDS----LEKTDEDKYKVTLKYPHYFPVMKKCCVPETRRKME  242 (678)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEETTTTTTCCHHHHHT----SCBCSSSEEEEESSHHHHHHHHHHCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHH----HHHHCCCCCEEECCCCCHHHHHHHCCCHHHHHHHH
T ss_conf             99999999999999975200034456788964798899999----99835798069623875378887378899999999


Q ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC-CHHHHHHHHHHHHHCCHHHHHHHHHHH----H
Q ss_conf             99999865054216999999866678865427899988976222258-989999999987630628999999999----9
Q gi|254780915|r  243 KALSHTFNKSSHIFSFITNTLAKDEEIQDRWRKYEKIADSRHLSNNV-EPYVIEALMQSVKNYYPKTSHRYYELK----K  317 (626)
Q Consensus       243 ~a~~~~~~~~~~~~a~il~~iv~~r~e~A~llGy~s~~~~~l~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~----~  317 (626)
                      .|+.+++.   ..|..++.+|+++|.+.|+++||+||++|++..+|+ +++.+..++..+.....|.+.+.....    +
T Consensus       243 ~a~~~r~~---~~N~~~l~~il~lR~e~A~LLGf~syA~~~l~~kMA~spe~V~~FL~~L~~~~~p~a~~E~~~L~~~k~  319 (678)
T 2o3e_A          243 MAFHTRCK---QENTAILQQLLPLRAQVAKLLGYNTHADFVLELNTAKSTSRVAAFLDDLSQKLKPLGEAEREFILSLKK  319 (678)
T ss_dssp             HHHTTTTH---HHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHCCCC---CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             98640130---023999999999999999862999799999986623678999999999999859999999999999987


Q ss_pred             HHC------CCCCCCHHHHHHCCC-----------CCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHH-------------
Q ss_conf             870------887531234440256-----------5547779989999999986666-328999999-------------
Q gi|254780915|r  318 KWL------KLDTMYFWDRLAPLP-----------GTSQDIIPFEVARDLVLQSYAK-FSPQMSIIA-------------  366 (626)
Q Consensus       318 ~~l------g~~~l~~wD~~~~~~-----------~~~~~~~~~ee~~~~v~~~~~~-~~~e~~~~~-------------  366 (626)
                      +..      +..+|.|||+.++..           ....++||.+.+.+++...... ||..+.+..             
T Consensus       320 ~~~~~~~~~~~~~l~pWD~~yy~~~~~~~~~~~d~~~l~~YF~l~~vl~Glf~l~~~Lfgi~~~~~~~~~~wh~dV~~~~  399 (678)
T 2o3e_A          320 KECEERGFEYDGKINAWDLHYYMTQTEELKYSVDQESLKEYFPIEVVTEGLLSIYQELLGLSFEQVPDAHVWNKSVSLYT  399 (678)
T ss_dssp             HHHHHTTCCCCSSCCHHHHHHHHHHHHHHHTCCCHHHHGGGCBHHHHHHHHHHHHHHHHTEEEEECTTCCCSSTTCEEEE
T ss_pred             HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHCEEEE
T ss_conf             87663378776787766689998888876414421101356848999999999999984211366667887641455899


Q ss_pred             ------HHHHHCCCCCHHCCCCCCCCCCCCCCCCC----------CCCEEECCCCC---------CHHHHHHHHHHHHHH
Q ss_conf             ------98642485020103799874354766677----------75101036533---------246799999984589
Q gi|254780915|r  367 ------EKFFTHNWIDAPQYDGKGSGAFAHGTIPS----------VHPYILLNYLG---------KPQDVMTLAHELGHG  421 (626)
Q Consensus       367 ------~~~~~~~~iD~~~r~gKr~GA~~~~~~~~----------~~~~I~~N~~~---------~~~dv~TL~HE~GHa  421 (626)
                            ...++..|+|+|+|+||++||||++++++          +...++|||+.         ++++|+|||||||||
T Consensus       400 V~d~~~g~~lG~~YlDl~~R~~K~~~a~~~~~~~~~~~~~~~~q~Pv~~lvcNf~~p~~~~p~lLs~~eV~TlFHEFGHa  479 (678)
T 2o3e_A          400 VKDKATGEVLGQFYLDLYPREGKYNHAACFGLQPGCLLPDGSRMMSVAALVVNFSQPVAGRPSLLRHDEVETYFHEFGHV  479 (678)
T ss_dssp             EEETTTCCEEEEEEEECSCCTTSCCSCEEEEEECCBBCTTSCBCCEEEEEECCCCCCBTTBCCBCCHHHHHHHHHHHHHH
T ss_pred             EEECCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             99726996789998864778999886758853677455798711357778622579999997735566760243556589


Q ss_pred             HHHHHHC-CCCCCCCCCCHHHHHHHHHHHHHHHHHH----------HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             9999612-5687765780059998868889999999----------9841389989999999998620699999999999
Q gi|254780915|r  422 IHFVLSS-ETQGILTNNSSLTLAETASIFGETLTFD----------SLLQAASSKEERKILLANKIEDMLNSIVRQISFY  490 (626)
Q Consensus       422 ~H~~ls~-~~~~~~~~~~~~~~aE~~S~~~E~~~~~----------~~~~~~~~~~~~~~ll~~~~~~~~~~~~~q~~~~  490 (626)
                      ||++|++ +++.++|+++++||||+|||+||+|||+          |.+++++|+++..+++..+..+.+..+.+|+.++
T Consensus       480 lH~lls~t~y~~~sGt~v~~DfvE~PSqlmE~w~~~~~vL~~~a~Hy~Tgeplp~~l~~~l~~~~~~~~~~~~~~ql~~a  559 (678)
T 2o3e_A          480 MHQICAQTDFARFSGTNVERDFVEVPSQMLENWVWDVDSLRKLSKHYKDGHPITDELLEKLVASRLVNTGLLTLRQIVLS  559 (678)
T ss_dssp             HHHHHCCBSSGGGSTTCSCTTTTTHHHHHHHGGGGCHHHHHHHCCCSSSCCCCCHHHHHHHHHTTTTTHHHHHHHHHHHH
T ss_pred             HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99887437767677867467688756999998408899997633777789958799999788887787999999999999


Q ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCC-CCCCCHHHHHHHHHHHHHHHH-HH
Q ss_conf             9999997212016899989999999999998607763458878885001525410-667525899999999999999-99
Q gi|254780915|r  491 DFELKLHTERRSTGDIPTHRINEIWLETQKESLGPAFDLSDLEYGSFWMMVPHFI-ESSFYVYAYAFGNCLVNSLYD-IY  568 (626)
Q Consensus       491 ~fe~~~h~~~~~~~~~t~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~w~~~~H~y-~~~fY~y~Y~~~~~~a~~l~~-~~  568 (626)
                      .||+.+|+...    .   +..+.|.++.+++.+.    +.....+++++|+|++ +++.-||+|.|++|+|+++|. .|
T Consensus       560 ~~D~~lHs~~~----~---d~~~~~~~~~~~~~~~----~~~~~~~~~~~F~Hl~~gY~A~YYsYlws~vlaadif~~~F  628 (678)
T 2o3e_A          560 KVDQSLHTNAT----L---DAASEYAKYCTEILGV----AATPGTNMPATFGHLAGGYDGQYYGYLWSEVFSMDMFHSCF  628 (678)
T ss_dssp             HHHHHHTTCTT----S---CHHHHHHHHHHHHTSS----CCCTTCCGGGGCTTSSSSCTTCTTHHHHHHHHHHHHHHHTH
T ss_pred             HHHHHHHCCCC----C---CHHHHHHHHHHHHCCC----CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             99999828898----6---5589999999986189----89999888885741248955052999999999999999999


Q ss_pred             HHCC--CHHHHHHHHH-HHHCCCCCCHHHHHHHC-CCCCCCHHHHHH
Q ss_conf             9567--3328999999-98326999979999970-889899889999
Q gi|254780915|r  569 KSNT--VDCFKEKYLN-ILRAGNSKHYSELLLPL-NINLSDPNFWER  611 (626)
Q Consensus       569 ~~~~--~~~~~~~y~~-~L~~Ggs~~~~el~k~~-G~d~~~~~~~~~  611 (626)
                      +++|  +++.+.+|++ ||+.|||+||.++++.| |.+++...|++.
T Consensus       629 ~~~g~~n~~~G~~~r~~iL~~Ggs~d~~~~~~~F~GR~p~~~a~l~~  675 (678)
T 2o3e_A          629 KKEGIMNPEVGMKYRNLILKPGGSLDGMDMLQNFLQREPNQKAFLMS  675 (678)
T ss_dssp             HHHCTTCHHHHHHHHHHHTTTGGGSCHHHHHHHHHTSCCCSHHHHHH
T ss_pred             HHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHH
T ss_conf             75799999999999998701679837999999845999983899986


No 6  
>2o36_A ThiMet oligopeptidase; thermolysin-like domain, substrate-binding channel, hydrolase; 1.95A {Homo sapiens} PDB: 1s4b_P
Probab=100.00  E-value=0  Score=536.30  Aligned_cols=545  Identities=16%  Similarity=0.120  Sum_probs=382.3

Q ss_pred             CCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             77679357278889278999999999999999999742331023349-98999999999999999999999999864205
Q gi|254780915|r   36 LPRWNLEDLYPSHDSQEISNDMECIEHESLAFKTRWEGNLAHATNQK-NCHSLGAAIAEYERICELIGRIASYAMLSYNC  114 (626)
Q Consensus        36 ~~~WdL~~ly~~~~~~e~~~dl~~~~~~i~~~~~~~~~~l~~~~~~~-~~~~l~~~l~~~e~i~~~l~rv~~ya~l~~s~  114 (626)
                      .-|||++.       -++.+..+.+-+.+.+       .+..|.... +..+|+|+|.++++++..++++...+.+..++
T Consensus         8 ~l~~~ltp-------~~i~~~~~~~i~~~~~-------~id~I~~~~~~~~tfenti~~ld~~~~~l~~~~~~~~~l~~v   73 (674)
T 2o36_A            8 DLRWDLSA-------QQIEERTRELIEQTKR-------VYDQVGTQEFEDVSYESTLKALADVEVTYTVQRNILDFPQHV   73 (674)
T ss_dssp             -CCCCCCH-------HHHHHHHHHHHHHHHH-------HHHHHHTCCGGGCCTTTTHHHHHHHHHHHHHHHHHHHSHHHH
T ss_pred             CCCCCCCH-------HHHHHHHHHHHHHHHH-------HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             87541889-------9999999999999999-------999996799899999999999999777999999999998715


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf             79918999999999999999999887416988719989999998---469001111799999997423317167998766
Q gi|254780915|r  115 NLSSPTIRKFYTDINAKLADFEKVLIFFALEINTLDEALLEQSY---AQDPLTLKYSAWIKNIRKIKKHLLSNDMECLLS  191 (626)
Q Consensus       115 dt~d~~~~~~~~~~~~~~s~~~~~l~~~~~e~~~l~e~~l~~~~---~~~~~l~~y~~~~~~l~~~~~~~l~~~~E~~l~  191 (626)
                      + +|+++++...++.++++++...+........++.. ..+.-.   ...+..+-....+.+..+...+.-.++.+++..
T Consensus        74 ~-~~~~~r~aa~~~~~~ls~~~~~l~~n~~Ly~~~~~-~~~~~~~~~L~~e~~r~l~~~~~~f~~~G~~L~~~~r~r~~~  151 (674)
T 2o36_A           74 S-PSKDIRTASTEADKKLSEFDVEMSMREDVYQRIVW-LQEKVQKDSLRPEAARYLERLIKLGRRNGLHLPRETQENIKR  151 (674)
T ss_dssp             C-SCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHSCTTCSCHHHHHHHHHHHHHHHHTTTTSCHHHHHHHHH
T ss_pred             C-CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH-HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf             9-99999999999999999999998568999999999-980723127999999999999999997468999899999999


Q ss_pred             HHHHHCCCHHHHHHH----------------------HHHHHHHHHHHCCCC---CHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             300100036777777----------------------644443322100347---5233213541888767999999999
Q gi|254780915|r  192 DTSQVGREALKRFFC----------------------ENIESLRFKINDQKI---PLTKAYKSFFDSDREVRKSAAKALS  246 (626)
Q Consensus       192 ~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~---~~~~~~~~l~~~dr~~Rk~a~~a~~  246 (626)
                      ...+.. .....+..                      ...+..+....+...   .....+.+.+++||++|+++|.|+.
T Consensus       152 l~~eis-~L~~~F~~nl~~~~~~~~~~~~el~Glp~~~l~~~~~~~~~~~~itl~~~~~~~vl~~~~~~~~Rk~~~~a~~  230 (674)
T 2o36_A          152 IKKKLS-LLCIDFNKNLNEDTTFLPFTLQELGGLPEDFLNSLEKMEDGKLKVTLKYPHYFPLLKKCHVPETRRKVEEAFN  230 (674)
T ss_dssp             HHHHHH-HHHHHHHHHHHHCCCEEEECTTTTTTSCHHHHTTSEECTTSCEEEESSHHHHHHHHHHCCCHHHHHHHHHHHT
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHHHH
T ss_conf             999999-9999999876665431120377635998899999997455985785458535788874778999999999984


Q ss_pred             HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC-CHHHHHHHHHHHHHCCHHHHHHHHHHHHHH------
Q ss_conf             9865054216999999866678865427899988976222258-989999999987630628999999999987------
Q gi|254780915|r  247 HTFNKSSHIFSFITNTLAKDEEIQDRWRKYEKIADSRHLSNNV-EPYVIEALMQSVKNYYPKTSHRYYELKKKW------  319 (626)
Q Consensus       247 ~~~~~~~~~~a~il~~iv~~r~e~A~llGy~s~~~~~l~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------  319 (626)
                      .++..   .+..++.+|+++|.+.|+++||+||++|++..+|+ +++.+..++..+.....|.+.+......+.      
T Consensus       231 ~r~~~---~N~~iL~ell~lR~e~AkLLGf~syA~y~L~~kMA~spe~V~~FL~~L~~~~~p~a~~E~~~L~~~~~~~~~  307 (674)
T 2o36_A          231 SRCKE---ENSAILKELVTLRAQKSRLLGFHTHADYVLEMNMAKTSQTVATFLDELAQKLKPLGEQERAVILELKRAECE  307 (674)
T ss_dssp             TTTHH---HHHHHHHHHHHHHHHHHHHTTCSSHHHHHHTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCC---HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             44630---059999999999999998649997999988866136659999999999998589999999999986899887


Q ss_pred             -CC---CCCCCHHHHHHCCC-----------CCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHH-----------------
Q ss_conf             -08---87531234440256-----------5547779989999999986666-328999999-----------------
Q gi|254780915|r  320 -LK---LDTMYFWDRLAPLP-----------GTSQDIIPFEVARDLVLQSYAK-FSPQMSIIA-----------------  366 (626)
Q Consensus       320 -lg---~~~l~~wD~~~~~~-----------~~~~~~~~~ee~~~~v~~~~~~-~~~e~~~~~-----------------  366 (626)
                       .|   .++|.|||+.++..           ....++|+.+.+.+++...+.. ||..+.+..                 
T Consensus       308 ~~~~~~~~~l~pWD~~yy~~~~~~~~~~~d~~~l~~YF~l~~vl~Glf~l~~~LfGi~f~~~~~~~~Wh~dV~~~~V~d~  387 (674)
T 2o36_A          308 RRGLPFDGRIRAWDMRYYMNQVEETRYCVDQNLLKEYFPVQVVTHGLLGIYQELLGLAFHHEEGASAWHEDVRLYTARDA  387 (674)
T ss_dssp             HHTCCCCSSCCTTTHHHHHHHHHHHHTCCCHHHHGGGCBHHHHHHHHHHHHHHHHTEEEEECTTCCCSSTTCEEEEEEET
T ss_pred             HCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEEEC
T ss_conf             32898767778556999985778764234588775037488999999999998856235643678777775538999974


Q ss_pred             --HHHHHCCCCCHHCCCCCCCCCCCCCCCCC----------CCCEEECCCCC---------CHHHHHHHHHHHHHHHHHH
Q ss_conf             --98642485020103799874354766677----------75101036533---------2467999999845899999
Q gi|254780915|r  367 --EKFFTHNWIDAPQYDGKGSGAFAHGTIPS----------VHPYILLNYLG---------KPQDVMTLAHELGHGIHFV  425 (626)
Q Consensus       367 --~~~~~~~~iD~~~r~gKr~GA~~~~~~~~----------~~~~I~~N~~~---------~~~dv~TL~HE~GHa~H~~  425 (626)
                        ...++..|+|+|+|+||++||||++++++          +...++|||+.         ++++|.|||||||||||++
T Consensus       388 ~~~~~lG~~YlDl~~R~~K~~~a~~~~~~~~~~~~~~~~q~Pv~~lv~Nf~~p~~~~p~lLs~~ev~TlFHEfGHalH~l  467 (674)
T 2o36_A          388 ASGEVVGKFYLDLYPREGKYGHAACFGLQPGCLRQDGSRQIAIAAMVANFTKPTADAPSLLQHDEVRTYFHEFGHVMHQL  467 (674)
T ss_dssp             TTCCEEEEEEEECSCCTTSCCSCEEEEEECCEECTTSCEECEEEEEECCCCCCBTTBCCBCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEEEECCCCCCCCCCCEEEEEECCEEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             68967899984137788887777453430111204898468767763367899899988366888887887787777876


Q ss_pred             HHC-CCCCCCCCCCHHHHHHHHHHHHHHHHHH----------HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             612-5687765780059998868889999999----------98413899899999999986206999999999999999
Q gi|254780915|r  426 LSS-ETQGILTNNSSLTLAETASIFGETLTFD----------SLLQAASSKEERKILLANKIEDMLNSIVRQISFYDFEL  494 (626)
Q Consensus       426 ls~-~~~~~~~~~~~~~~aE~~S~~~E~~~~~----------~~~~~~~~~~~~~~ll~~~~~~~~~~~~~q~~~~~fe~  494 (626)
                      |++ +++.+.++++++||||+|||+||+|||+          |.+++++|+++..+++..+..+.+..+.+|+.++.||+
T Consensus       468 ls~~~y~~~sGt~~~~DfvE~pSql~E~~~~~~~vL~~~a~h~~tge~lp~~l~~~~~~~~~~~~~~~~~~ql~~a~~D~  547 (674)
T 2o36_A          468 CSQAEFAMFSGTHVETDFVEAPSQMLENWVWEQEPLLRMSRHYRTGSAVPRELLEKLIESRQANTGLFNLRQIVLAKVDQ  547 (674)
T ss_dssp             HCCCSSGGGSTTCSCTTTTTHHHHHHHGGGGSHHHHHHTCCCTTTCCCCCHHHHHHHHHGGGTTHHHHHHHHHHHHHHHH
T ss_pred             HCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             32666554455446500421749999873207899987632577788787999999986532748999999999999999


Q ss_pred             HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCC-CCCCHHHHHHHHHHHHHHHH-HHHHCC
Q ss_conf             9972120168999899999999999986077634588788850015254106-67525899999999999999-999567
Q gi|254780915|r  495 KLHTERRSTGDIPTHRINEIWLETQKESLGPAFDLSDLEYGSFWMMVPHFIE-SSFYVYAYAFGNCLVNSLYD-IYKSNT  572 (626)
Q Consensus       495 ~~h~~~~~~~~~t~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~w~~~~H~y~-~~fY~y~Y~~~~~~a~~l~~-~~~~~~  572 (626)
                      .+|+..+    .   +..+++.++.+++.|-    +.....+++++|+|+++ ++--||+|.|++++|+++|. .|+++|
T Consensus       548 ~lH~~~~----~---~~~~~~~~l~~~~~~~----~~~~~~~~~~~F~Hl~~gY~A~YYsYlws~vlaadi~~~~F~~~g  616 (674)
T 2o36_A          548 ALHTQTD----A---DPAEEYARLCQEILGV----PATPGTNMPATFGHLAGGYDAQYYGYLWSEVYSMDMFHTRFKQEG  616 (674)
T ss_dssp             HHTTCSS----C---CHHHHHHHHHHHTTSS----CCCTTCCGGGGCGGGGTTCTTCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHCCCC----C---CHHHHHHHHHHHHCCC----CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             9847899----8---7699999999983699----999998888847522389540139999999999999999997669


Q ss_pred             --CHHHHHHHHH-HHHCCCCCCHHHHHHHC-CCCCCCHHHHHH
Q ss_conf             --3328999999-98326999979999970-889899889999
Q gi|254780915|r  573 --VDCFKEKYLN-ILRAGNSKHYSELLLPL-NINLSDPNFWER  611 (626)
Q Consensus       573 --~~~~~~~y~~-~L~~Ggs~~~~el~k~~-G~d~~~~~~~~~  611 (626)
                        +++.+++|++ ||+.|||+||.++++.| |.+++...|++.
T Consensus       617 ~~n~~~G~~~r~~iL~~Ggs~~~~e~~~~flGr~p~~~a~l~~  659 (674)
T 2o36_A          617 VLNSKVGMDYRSCILRPGGSEDASAMLRRFLGRDPKQDAFLLS  659 (674)
T ss_dssp             TTCHHHHHHHHHHTTTTGGGSCHHHHHHHHHSSCCCSHHHHHH
T ss_pred             CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHH
T ss_conf             9999999999999712679828999999835999981699986


No 7  
>1uze_A Angiotensin converting enzyme; metalloprotease, inhibitor, enalaprilat, zinc dependant peptidase, anti-hypertensive drug; HET: EAL; 1.82A {Homo sapiens} SCOP: d.92.1.5 PDB: 1o8a_A* 1o86_A* 1uzf_A* 2oc2_A* 2iux_A* 2iul_A* 3bkk_A* 3bkl_A* 3l3n_A*
Probab=100.00  E-value=0  Score=458.71  Aligned_cols=511  Identities=13%  Similarity=0.043  Sum_probs=379.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
Q ss_conf             99899999999999999999999999986420579918999999999999999999887416988719989999998469
Q gi|254780915|r   82 KNCHSLGAAIAEYERICELIGRIASYAMLSYNCNLSSPTIRKFYTDINAKLADFEKVLIFFALEINTLDEALLEQSYAQD  161 (626)
Q Consensus        82 ~~~~~l~~~l~~~e~i~~~l~rv~~ya~l~~s~dt~d~~~~~~~~~~~~~~s~~~~~l~~~~~e~~~l~e~~l~~~~~~~  161 (626)
                      .+.+...++|..+++..+.+.+++++|++.+++|++|+. .+...++...++++....   ..+...++.        ..
T Consensus         3 ~~~~~a~~fl~~y~~~~~~~~~~~~~A~~~~~tn~tde~-~~~~~~~~~~~~~~~~~~---~~~~~~f~~--------~~   70 (589)
T 1uze_A            3 TDEAEASKFVEEYDRTSQVVWNEYAEANWNYNTNITTET-SKILLQKNMQIANHTLKY---GTQARKFDV--------NQ   70 (589)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHH-HHHHHHHHHHHHHHHHHH---HHHHTTSCG--------GG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH-HHHHHHHHHHHHHHHHHH---HHHHHHCHH--------CC
T ss_conf             989999999999999999998999999999985499799-999999999999999999---999985511--------13


Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH-HHHCCCCCHHH--HHHHHHCCCHHHH
Q ss_conf             00111179999999742331716799876630010003677777764444332-21003475233--2135418887679
Q gi|254780915|r  162 PLTLKYSAWIKNIRKIKKHLLSNDMECLLSDTSQVGREALKRFFCENIESLRF-KINDQKIPLTK--AYKSFFDSDREVR  238 (626)
Q Consensus       162 ~~l~~y~~~~~~l~~~~~~~l~~~~E~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~~~dr~~R  238 (626)
                      .....+++.+..+.+..++.++++.++.++.+.......+   ..     .+. ...++..++..  ...+..++|+..|
T Consensus        71 l~~~~~k~~l~~l~~~~~~~l~~~~~~~l~~l~~~~~~~y---~~-----a~i~~~~g~~~~l~~~~~~~~~~srd~~e~  142 (589)
T 1uze_A           71 LQNTTIKRIIKKVQDLERAALPAQELEEYNKILLDMETTY---SV-----ATVCHPNGSCLQLEPDLTNVMATSRKYEDL  142 (589)
T ss_dssp             CCCHHHHHHHHHHTCCGGGGSCHHHHHHHHHHHHHHHHHH---HH-----CEEECSSSCEEETTTHHHHHHHHCCCHHHH
T ss_pred             CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH---CC-----EEEECCCCCEEECCCCHHHHHHCCCCHHHH
T ss_conf             8989999999999873423799899999999999999986---15-----556569997511783067776149879999


Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC--HHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf             9999999998650542169999998666788654278999889762222589--89999999987630628999999999
Q gi|254780915|r  239 KSAAKALSHTFNKSSHIFSFITNTLAKDEEIQDRWRKYEKIADSRHLSNNVE--PYVIEALMQSVKNYYPKTSHRYYELK  316 (626)
Q Consensus       239 k~a~~a~~~~~~~~~~~~a~il~~iv~~r~e~A~llGy~s~~~~~l~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~  316 (626)
                      ..+|.++.+...   ..+..++..++++|++.|+++||+|+.++.+.....+  ...++.++..+..... ..+.+.+.+
T Consensus       143 ~~aw~~~~~~~~---~~~~~~~~~lv~l~n~~Ak~~G~~~~~~~~r~~y~~~~~~~~~~~l~~~v~p~~~-~l~~~~r~~  218 (589)
T 1uze_A          143 LWAWEGWRDKAG---RAILQFYPKYVELINQAARLNGYVDAGDSWRSMYETPSLEQDLERLFQELQPLYL-NLHAYVRRA  218 (589)
T ss_dssp             HHHHHHHHHHTH---HHHTTTHHHHHHHHHHHHHHTTCSSHHHHHHGGGCCTTHHHHHHHHHHHTHHHHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_conf             999999999862---5347999999999999999869998899853226616799999999999899999-999999999


Q ss_pred             -----------------HHHCCCCCCCHHHHHHCCCCCCCC--CCCHHH--------HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             -----------------987088753123444025655477--799899--------99999986666328999999986
Q gi|254780915|r  317 -----------------KKWLKLDTMYFWDRLAPLPGTSQD--IIPFEV--------ARDLVLQSYAKFSPQMSIIAEKF  369 (626)
Q Consensus       317 -----------------~~~lg~~~l~~wD~~~~~~~~~~~--~~~~ee--------~~~~v~~~~~~~~~e~~~~~~~~  369 (626)
                                       ++++|.+.+++||..++.......  .++...        +.+++..+...|+......+...
T Consensus       219 l~~~yg~~~~~~~~~i~a~llg~~~~~~wd~~~~l~~~~p~~~~~d~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~  298 (589)
T 1uze_A          219 LHRHYGAQHINLEGPIPAHLLGNMWAQTWSNIYDLVVPFPSAPSMDTTEAMLKQGWTPRRMFKEADDFFTSLGLLPVPPE  298 (589)
T ss_dssp             HHHHHCTTTCCTTSCEETTSSSSTTSSCCGGGHHHHCSCTTSCCCCHHHHHHHTTCCHHHHHHHHHHHHHHTTCCCCCHH
T ss_pred             HHHHHCCCCCCCCCCCHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99871732267543005776276652574200465567767898767888887201199999999999998678887789


Q ss_pred             HHCCCCCHHCCCCCCCCCCCCCCC--CCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
Q ss_conf             424850201037998743547666--777510103653324679999998458999996125687765780059998868
Q gi|254780915|r  370 FTHNWIDAPQYDGKGSGAFAHGTI--PSVHPYILLNYLGKPQDVMTLAHELGHGIHFVLSSETQGILTNNSSLTLAETAS  447 (626)
Q Consensus       370 ~~~~~iD~~~r~gKr~GA~~~~~~--~~~~~~I~~N~~~~~~dv~TL~HE~GHa~H~~ls~~~~~~~~~~~~~~~aE~~S  447 (626)
                      |.++|+|.+||+||++||||+++.  ..++|+|+||++++++||.||+||||||+|+++++ +||+...+.+.+.+|.|+
T Consensus       299 f~~~~id~~~~~gK~~g~~~s~~~~~~~~~p~I~~n~~~~~~dv~Tl~HElGHa~h~~~~~-~qp~~~~~~~~~~~e~a~  377 (589)
T 1uze_A          299 FWNKSMLEKPTDGREVVCHASAWDFYNGKDFRIKQCTTVNLEDLVVAHHEMGHIQYFMQYK-DLPVALREGANPGFHEAI  377 (589)
T ss_dssp             HHHHCBCSCCCSSCCCCCSCEEEECSSSSCEEEECCCCSSHHHHHHHHHHHHHHHHHHHTT-TSCGGGCSCSSHHHHHHH
T ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHC-CCCHHHHCCCCCHHHHHH
T ss_conf             9863442355357888888660356678777476258786889999999988999999970-587253158981788888


Q ss_pred             HHHHHHH---HHHHH------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf             8899999---99984------13899899999999986206999999999999999997212016899989999999999
Q gi|254780915|r  448 IFGETLT---FDSLL------QAASSKEERKILLANKIEDMLNSIVRQISFYDFELKLHTERRSTGDIPTHRINEIWLET  518 (626)
Q Consensus       448 ~~~E~~~---~~~~~------~~~~~~~~~~~ll~~~~~~~~~~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~~~~  518 (626)
                      ...+.+.   +.|+.      +...+++.....+..++.+...++..+++++.|++.+|+     +++|++++++.|+++
T Consensus       378 ~~~~~l~~~t~~~l~~~~l~~~~~~~~e~~~~~l~~~~~~~i~flp~~~~~d~~~~~v~~-----~~~t~~~~n~~w~~l  452 (589)
T 1uze_A          378 GDVLALSVSTPKHLHSLNLLSSEGGSDEHDINFLMKMALDKIAFIPFSYLVDQWRWRVFD-----GSITKENYNQEWWSL  452 (589)
T ss_dssp             HHHHHHHHTSHHHHHHTTSCCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----TSSCTTTHHHHHHHH
T ss_pred             HHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCHHHHHHHHHHH
T ss_conf             889999853799998658732233575889999999999999999999999999999977-----999989999999999


Q ss_pred             HHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-------------CHHHHHHHHHHHH
Q ss_conf             998607763458878885001525410667525899999999999999999567-------------3328999999983
Q gi|254780915|r  519 QKESLGPAFDLSDLEYGSFWMMVPHFIESSFYVYAYAFGNCLVNSLYDIYKSNT-------------VDCFKEKYLNILR  585 (626)
Q Consensus       519 ~~~~~g~~~~~~~~~~~~~w~~~~H~y~~~fY~y~Y~~~~~~a~~l~~~~~~~~-------------~~~~~~~y~~~L~  585 (626)
                      .++|.|...+.+..+....|.+++||+ +|||||.|+||++++.++|..+++++             .+.++++|+++|+
T Consensus       453 ~~~y~g~~~~~~~~~~~~d~~~~~Hi~-~~~yY~~Y~~a~v~a~q~~~~~~~~~~~~~pl~~c~~~~~~~ag~~~~~~L~  531 (589)
T 1uze_A          453 RLKYQGLCPPVPRTQGDFDPGAKFHIP-SSVPYIRYFVSFIIQFQFHEALCQAAGHTGPLHKCDIYQSKEAGQRLATAMK  531 (589)
T ss_dssp             HHHHHCEECSSCCCTTCCGGGGSTTTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCSCGGGCCCTTCHHHHHHHHHHHT
T ss_pred             HHHHCCCCCCCCCCHHHCCCCCCEEEC-CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             987479899998874443745321127-9973799999999999999999986076787510134586999999999984


Q ss_pred             CCCCCCHHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             26999979999970-889899889999999999999998
Q gi|254780915|r  586 AGNSKHYSELLLPL-NINLSDPNFWERGLQTVEKMIDDV  623 (626)
Q Consensus       586 ~Ggs~~~~el~k~~-G~d~~~~~~~~~~~~~~~~~i~~~  623 (626)
                      .|||+++.|+++.+ |.+..+++++.+=++.+..||++-
T Consensus       532 ~G~S~~~~e~l~~~~G~~~~s~~~ll~yf~pL~~~l~~~  570 (589)
T 1uze_A          532 LGFSRPWPEAMQLITGQPNMSASAMLSYFKPLLDWLRTE  570 (589)
T ss_dssp             TTTSSCHHHHHHHHHSSCSCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             879999899999970987898499999999999999999


No 8  
>2x96_A Angiotensin converting enzyme; hydrolase, ACE inhibitor, zinc metallopeptidase; HET: RX3 EPE NAG BMA MAN; 1.85A {Drosophila melanogaster} PDB: 2x8z_A* 2x90_A* 2x91_A* 2x8y_A* 2x97_A* 2xhm_A* 2x94_A* 2x92_A* 2x93_A* 2x95_A* 1j36_A* 1j37_A* 1j38_A
Probab=100.00  E-value=0  Score=450.74  Aligned_cols=511  Identities=12%  Similarity=0.041  Sum_probs=379.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHH
Q ss_conf             99999999999999999999999864205799189999999999999999998874169887199899999984690011
Q gi|254780915|r   86 SLGAAIAEYERICELIGRIASYAMLSYNCNLSSPTIRKFYTDINAKLADFEKVLIFFALEINTLDEALLEQSYAQDPLTL  165 (626)
Q Consensus        86 ~l~~~l~~~e~i~~~l~rv~~ya~l~~s~dt~d~~~~~~~~~~~~~~s~~~~~l~~~~~e~~~l~e~~l~~~~~~~~~l~  165 (626)
                      ....+|..+++....++++.+|+++.+++|++|+.. +...++...++.+...++   .....++.        ......
T Consensus         8 ~A~~fL~~~~~~~~~l~~~~s~A~w~~~tn~tde~~-~~~~e~~~~~a~~~~~~~---~~~~~~~~--------~~~~~~   75 (598)
T 2x96_A            8 QAKEYLENLNKELAKRTNVETEAAWAYGSNITDENE-KKKNEISAELAKFMKEVA---SDTTKFQW--------RSYQSE   75 (598)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCHHHH-HHHHHHHHHHHHHHHHHH---HHHTTSCG--------GGCSCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHH---HHHHHHHH--------HCCCCH
T ss_conf             999999999999999989999998899856996999-999999999999999999---99986343--------047999


Q ss_pred             HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHCCCHHHHHHHHH
Q ss_conf             117999999974233171679987663001000367777776444433221003--475233213541888767999999
Q gi|254780915|r  166 KYSAWIKNIRKIKKHLLSNDMECLLSDTSQVGREALKRFFCENIESLRFKINDQ--KIPLTKAYKSFFDSDREVRKSAAK  243 (626)
Q Consensus       166 ~y~~~~~~l~~~~~~~l~~~~E~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~dr~~Rk~a~~  243 (626)
                      .+++.+..+.+...+.++++..+.+.......   ...+......... ...+.  .........+..+.|++.|+.+|+
T Consensus        76 ~~kr~l~~l~~~~~~~l~~~~~~~l~~l~~~l---~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~s~d~~~~~~~~~  151 (598)
T 2x96_A           76 DLKRQFKALTKLGYAALPEDDYAELLDTLSAM---ESNFAKVKVCDYK-DSTKCDLALDPEIEEVISKSRDHEELAYYWR  151 (598)
T ss_dssp             HHHHHHHHHHCCGGGGSCHHHHHHHHHHHHHH---HHHHHHCCBCCSS-CTTCCCBCTTTHHHHHHHHCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH---HHHHHCCEECCCC-CCCCCEEECCHHHHHHHHCCCCHHHHHHHHH
T ss_conf             99999999986043469977899999999999---9997571502246-8866400034677787641567999999999


Q ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC--HHHHHHHHHHHHHCCHHHHHHHHHHH-----
Q ss_conf             99998650542169999998666788654278999889762222589--89999999987630628999999999-----
Q gi|254780915|r  244 ALSHTFNKSSHIFSFITNTLAKDEEIQDRWRKYEKIADSRHLSNNVE--PYVIEALMQSVKNYYPKTSHRYYELK-----  316 (626)
Q Consensus       244 a~~~~~~~~~~~~a~il~~iv~~r~e~A~llGy~s~~~~~l~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~-----  316 (626)
                      ++.....   ..+..++..++++|++.|+++||++++++.+...+..  ..+++.+...+.....+ .+++.+.+     
T Consensus       152 ~~~~~~~---~~~~~~~~~lv~l~n~~A~~~Gy~~~~~~~~~~~~~~~~~~~~~~l~~~i~p~~~~-l~~~~~~~l~~~~  227 (598)
T 2x96_A          152 EFYDKAG---TAVRSQFERYVELNTKAAKLNNFTSGAEAWLDEYEDDTFEQQLEDIFADIRPLYQQ-IHGYVRFRLRKHY  227 (598)
T ss_dssp             HHHHHHT---GGGHHHHHHHHHHHHHHHHHTTCSSHHHHHHGGGCCTTHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred             HHHHHHH---HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
T ss_conf             9999867---88899999999999999998699877888865346345999999999999999999-9999999999981


Q ss_pred             ------------HHHCCCCCCCHHHHHHCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHC
Q ss_conf             ------------98708875312344402565547--779989999999986666328999999986----------424
Q gi|254780915|r  317 ------------KKWLKLDTMYFWDRLAPLPGTSQ--DIIPFEVARDLVLQSYAKFSPQMSIIAEKF----------FTH  372 (626)
Q Consensus       317 ------------~~~lg~~~l~~wD~~~~~~~~~~--~~~~~ee~~~~v~~~~~~~~~e~~~~~~~~----------~~~  372 (626)
                                  ++++|.+.+++||..++......  +.++...........+..+.+...+++..+          ...
T Consensus       228 g~~~~~~~~~~~a~~lg~~~~~~wd~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  307 (598)
T 2x96_A          228 GDAVVSETGPIPMHLLGNMWAQQWSEIADIVSPFPEKPLVDVSAEMEKQGYTPLKMFQMGDDFFTSMNLTKLPQDFWDKS  307 (598)
T ss_dssp             CTTTSCSSSCEEGGGSSSTTCSCCGGGHHHHCSCTTSCCCCCHHHHHHTTCCHHHHHHHHHHHHHHTTCCCCCHHHHHHC
T ss_pred             CCCCCCCCCHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHC
T ss_conf             73326742014687732055236422365446776778776779999852029999899999999855321343677614


Q ss_pred             CCCCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             85020103799874354766677751010365332467999999845899999612568776578005999886888999
Q gi|254780915|r  373 NWIDAPQYDGKGSGAFAHGTIPSVHPYILLNYLGKPQDVMTLAHELGHGIHFVLSSETQGILTNNSSLTLAETASIFGET  452 (626)
Q Consensus       373 ~~iD~~~r~gKr~GA~~~~~~~~~~~~I~~N~~~~~~dv~TL~HE~GHa~H~~ls~~~~~~~~~~~~~~~aE~~S~~~E~  452 (626)
                      .|+|+++|+||++||||+++++.++|+|++|++++++||.|||||||||+|+++++ +||+...+.+++.+|.||++++.
T Consensus       308 ~~~d~~~~~gK~~ga~~~~~~~~~~p~i~~~~~~~~~dv~Tl~HE~GHa~h~~~~~-~qp~~~~~~~~~~~e~a~~~~~~  386 (598)
T 2x96_A          308 IIEKPTDGRDLVCHASAWDFYLTDDVRIKQCTRVTQDQLFTVHHELGHIQYFLQYQ-HQPFVYRTGANPGFHEAVGDVLS  386 (598)
T ss_dssp             BCSCCSSSCCCCCSCEEEECSSSSCEEEECCCCSSHHHHHHHHHHHHHHHHHHHHT-TSCGGGCSCSSHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCCHHHCCCCCCHHHHHHHHHHH
T ss_conf             50004123688888743236777876550577776999999999999999999971-69704306888217888888999


Q ss_pred             HHH---HHH------HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             999---998------41389989999999998620699999999999999999721201689998999999999999860
Q gi|254780915|r  453 LTF---DSL------LQAASSKEERKILLANKIEDMLNSIVRQISFYDFELKLHTERRSTGDIPTHRINEIWLETQKESL  523 (626)
Q Consensus       453 ~~~---~~~------~~~~~~~~~~~~ll~~~~~~~~~~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~~~~~~~~~  523 (626)
                      ++.   .++      .+...+++.....+..++.+...++..++++..|++.+|+     +.++++++++.|.++.+++.
T Consensus       387 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~v~~-----~~~~~~~~~~~w~~l~~~~~  461 (598)
T 2x96_A          387 LSVSTPKHLEKIGLLKDYVRDDEARINQLFLTALDKIVFLPFAFTMDKYRWSLFR-----GEVDKANWNCAFWKLRDEYS  461 (598)
T ss_dssp             HHHTSHHHHHHTTCSCSCCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-----TCSCGGGHHHHHHHHHHHHH
T ss_pred             HHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHHHHHC
T ss_conf             9985799997530011025776888999999999899988999999999988744-----79998999999999999856


Q ss_pred             CCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-------------------CHHHHHHHHHHH
Q ss_conf             7763458878885001525410667525899999999999999999567-------------------332899999998
Q gi|254780915|r  524 GPAFDLSDLEYGSFWMMVPHFIESSFYVYAYAFGNCLVNSLYDIYKSNT-------------------VDCFKEKYLNIL  584 (626)
Q Consensus       524 g~~~~~~~~~~~~~w~~~~H~y~~~fY~y~Y~~~~~~a~~l~~~~~~~~-------------------~~~~~~~y~~~L  584 (626)
                      |...+.+.....+.|.+|+||| +|+|||+|+||+++++++|..++++|                   ++.++++|++||
T Consensus       462 g~~~~~~~~~~~~~~~~~~Hi~-~~~yy~~Y~~~~vl~~q~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ag~~~r~~L  540 (598)
T 2x96_A          462 GIEPPVVRSEKDFDAPAKYHIS-ADVEYLRYLVSFIIQFQFYKSACIKAGQYDPDNVELPLDNCDIYGSAAAGAAFHNML  540 (598)
T ss_dssp             CEECSSCEETTCCCGGGSHHHH-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCTTSCGGGCCCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             8889988875553454352018-998579999999999999999998636555433346641033327799999999998


Q ss_pred             HCCCCCCHHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             326999979999970-889899889999999999999998
Q gi|254780915|r  585 RAGNSKHYSELLLPL-NINLSDPNFWERGLQTVEKMIDDV  623 (626)
Q Consensus       585 ~~Ggs~~~~el~k~~-G~d~~~~~~~~~~~~~~~~~i~~~  623 (626)
                      +.|||++|.|+++.| |.+..+++++.+=++.+..||++-
T Consensus       541 ~~G~S~~~~e~l~~~~G~~~~s~~~ll~yf~pl~~~l~~~  580 (598)
T 2x96_A          541 SMGASKPWPDALEAFNGERIMSGKAIAEYFEPLRVWLEAE  580 (598)
T ss_dssp             TTTTSSCHHHHHHHHHSCCSCCSHHHHHHHHHHHHHHHHH
T ss_pred             HCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             4769999999999972977898599999999999999999


No 9  
>1r42_A Angiotensin I converting enzyme 2; zinc metallopeptidase domain, native or open conformation, chloride ION binding site; HET: NAG; 2.20A {Homo sapiens} SCOP: d.92.1.5 PDB: 1r4l_A* 2ajf_A* 3kbh_A* 3d0g_A* 3d0h_A* 3d0i_A*
Probab=100.00  E-value=0  Score=416.59  Aligned_cols=508  Identities=13%  Similarity=0.049  Sum_probs=367.4

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
Q ss_conf             98999999999999999999999999864205799189999999999999999998874169887199899999984690
Q gi|254780915|r   83 NCHSLGAAIAEYERICELIGRIASYAMLSYNCNLSSPTIRKFYTDINAKLADFEKVLIFFALEINTLDEALLEQSYAQDP  162 (626)
Q Consensus        83 ~~~~l~~~l~~~e~i~~~l~rv~~ya~l~~s~dt~d~~~~~~~~~~~~~~s~~~~~l~~~~~e~~~l~e~~l~~~~~~~~  162 (626)
                      +.++...+|..+|+..+.+.+..++|++.+++|++|+.. +...++...++++....+.   +..+.+        ....
T Consensus        21 ~~e~a~~fl~~~~~~~~~l~~~~~~A~~~~~tn~td~~~-~~~~e~~~~~~~~~~e~~~---~~~~f~--------~~~~   88 (615)
T 1r42_A           21 IEEQAKTFLDKFNHEAEDLFYQSSLASWNYNTNITEENV-QNMNNAGDKWSAFLKEQST---LAQMYP--------LQEI   88 (615)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCHHHH-HHHHHHHHHHHHHHHHHHT---TTTTSC--------STTC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH-HHHHHHHHHHHHHHHHHHH---HHHHCC--------CCCC
T ss_conf             899999999999999999989999999999802885999-9999999999999999999---998385--------3335


Q ss_pred             CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC-----CCCHHHHHHHHHCCCHHH
Q ss_conf             011117999999974233171679987663001000367777776444433221003-----475233213541888767
Q gi|254780915|r  163 LTLKYSAWIKNIRKIKKHLLSNDMECLLSDTSQVGREALKRFFCENIESLRFKINDQ-----KIPLTKAYKSFFDSDREV  237 (626)
Q Consensus       163 ~l~~y~~~~~~l~~~~~~~l~~~~E~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~dr~~  237 (626)
                      ....+++.+..+.+..+|.++++..+.++.+........        +..+....+.     .........+..+.|++.
T Consensus        89 ~~~~~kr~l~~l~~~~~~~l~~~~~~~l~~l~~~~~~~~--------~~~~v~~~~~~~~~~~l~p~~~~~~~~srd~~~  160 (615)
T 1r42_A           89 QNLTVKLQLQALQQNGSSVLSEDKSKRLNTILNTMSTIY--------STGKVCNPDNPQECLLLEPGLNEIMANSLDYNE  160 (615)
T ss_dssp             CCHHHHHHHHHHTCCGGGGSCHHHHHHHHHHHHHHHHHH--------HHCEEEETTEEEEEEETTTBHHHHHHHCCCHHH
T ss_pred             CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH--------CCEEECCCCCCCCCHHCCHHHHHHHHHCCCHHH
T ss_conf             889999999998852744799899999999999999975--------342335688875312024465567651578999


Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH--------CCCCHHHHHHHHHHHHHCCHHHH
Q ss_conf             9999999999865054216999999866678865427899988976222--------25898999999998763062899
Q gi|254780915|r  238 RKSAAKALSHTFNKSSHIFSFITNTLAKDEEIQDRWRKYEKIADSRHLS--------NNVEPYVIEALMQSVKNYYPKTS  309 (626)
Q Consensus       238 Rk~a~~a~~~~~~~~~~~~a~il~~iv~~r~e~A~llGy~s~~~~~l~~--------~~~~~~~~~~l~~~~~~~~~~~~  309 (626)
                      |+.+|.++.+...   ..+..++..++++|.+.|+++||+|++++.+..        ..++++.+...++.+.....|..
T Consensus       161 ~~~~w~~~~~~~~---~~~~~~~~~lv~lrn~~A~~lG~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~i~pl~  237 (615)
T 1r42_A          161 RLWAWESWRSEVG---KQLRPLYEEYVVLKNEMARANHYEDYGDYWRGDYEVNGVDGYDYSRGQLIEDVEHTFEEIKPLY  237 (615)
T ss_dssp             HHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHTTTCBCSCTTTCBCSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999875---7548999999999999999859998999998860132010123799999999999999988779


Q ss_pred             HHHHHHH-------------------HHHCCCCCCCHHHHHHCCCCCCC-------------CCCCHHHHHHHHHHHHHH
Q ss_conf             9999999-------------------98708875312344402565547-------------779989999999986666
Q gi|254780915|r  310 HRYYELK-------------------KKWLKLDTMYFWDRLAPLPGTSQ-------------DIIPFEVARDLVLQSYAK  357 (626)
Q Consensus       310 ~~~~~~~-------------------~~~lg~~~l~~wD~~~~~~~~~~-------------~~~~~ee~~~~v~~~~~~  357 (626)
                      ..+....                   +.++|.+.+++||..++......             ..+.+.++...+.+-+..
T Consensus       238 ~~l~~~~r~~L~~~y~~~~~~~~~l~~~llG~~~l~~wd~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ff~s  317 (615)
T 1r42_A          238 EHLHAYVRAKLMNAYPSYISPIGCLPAHLLGDMWGRFWTNLYSLTVPFGQKPNIDVTDAMVDQAWDAQRIFKEAEKFFVS  317 (615)
T ss_dssp             HHHHHHHHHHHHHHSTTTSCTTBCEEGGGSSSSSCSCCGGGHHHHCTTTTSCCCCCTTTTGGGTCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHCHHHHCCCCCCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf             99999999999874324413456632553160988777633876778878898888999998502099999999999987


Q ss_pred             HHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC---
Q ss_conf             32899999998642485020103799874354766677751010365332467999999845899999612568776---
Q gi|254780915|r  358 FSPQMSIIAEKFFTHNWIDAPQYDGKGSGAFAHGTIPSVHPYILLNYLGKPQDVMTLAHELGHGIHFVLSSETQGIL---  434 (626)
Q Consensus       358 ~~~e~~~~~~~~~~~~~iD~~~r~gKr~GA~~~~~~~~~~~~I~~N~~~~~~dv~TL~HE~GHa~H~~ls~~~~~~~---  434 (626)
                      ++.  ....+.++.+.|+|...++||++|++|...++..+|+|+||+.++++||.||+||+||++|++++++ ||+.   
T Consensus       318 ~~~--~~~~~~~w~~~~~~~~~~~gk~~~~~~~~~~~~~~p~i~~~~~~~~~dv~TlhHE~GH~~h~~~~~~-qp~~~~~  394 (615)
T 1r42_A          318 VGL--PNMTQGFWENSMLTDPGNVQKAVCHPTAWDLGKGDFRILMCTKVTMDDFLTAHHEMGHIQYDMAYAA-QPFLLRN  394 (615)
T ss_dssp             TTC--CCCCTTHHHHCBCSCCCTTCCCCCSCEEEEEETTEEEEECCCCSSHHHHHHHHHHHHHHHHHHHTTT-SCGGGCS
T ss_pred             CCC--HHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC-CCCCCCC
T ss_conf             042--1006677762563556667988877400576677861220677648899999999999999999716-9830026


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             578005999886888999999998413-------8998999999999862069999999999999999972120168999
Q gi|254780915|r  435 TNNSSLTLAETASIFGETLTFDSLLQA-------ASSKEERKILLANKIEDMLNSIVRQISFYDFELKLHTERRSTGDIP  507 (626)
Q Consensus       435 ~~~~~~~~aE~~S~~~E~~~~~~~~~~-------~~~~~~~~~ll~~~~~~~~~~~~~q~~~~~fe~~~h~~~~~~~~~t  507 (626)
                      +..+++++||++||+||.|+++|+...       ..+++.....+.....+...++..+.+++.|++.+|+     +.++
T Consensus       395 ~~~~~~e~ae~~s~~le~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~~l~~i~~lp~~~~~D~~~h~v~~-----~~~~  469 (615)
T 1r42_A          395 GANEGFHEAVGEIMSLSAATPKHLKSIGLLSPDFQEDNETEINFLLKQALTIVGTLPFTYMLEKWRWMVFK-----GEIP  469 (615)
T ss_dssp             CSSTTHHHHHHHHHHHHHHSHHHHHHTTSSCTTSCCCHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH-----TCSC
T ss_pred             CCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCCC
T ss_conf             89943999989999998507899998568753334677999999999999999999999999999999707-----9999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-------------CH
Q ss_conf             89999999999998607763458878885001525410667525899999999999999999567-------------33
Q gi|254780915|r  508 THRINEIWLETQKESLGPAFDLSDLEYGSFWMMVPHFIESSFYVYAYAFGNCLVNSLYDIYKSNT-------------VD  574 (626)
Q Consensus       508 ~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~w~~~~H~y~~~fY~y~Y~~~~~~a~~l~~~~~~~~-------------~~  574 (626)
                      ++++++.|+++..++.|...+.+.....+.|..+.||+ +|+|||+|.||+|++.++|..+++.+             .+
T Consensus       470 ~~~~~~~w~~l~~~~~~~~~p~~~~~~~~~~~~~~Hi~-~~~yY~~Y~~a~vl~~q~~~~~~~~~~~~~~l~~c~~~~~~  548 (615)
T 1r42_A          470 KDQWMKKWWEMKREIVGVVEPVPHDETYCDPASLFHVS-NDYSFIRYYTRTLYQFQFQEALCQAAKHEGPLHKCDISNST  548 (615)
T ss_dssp             GGGHHHHHHHHHHHHTCEECSSCCCTTCCGGGGSHHHH-TTCCCTHHHHHHHHHHHHHHHHHHTTTCCSCGGGCCCTTCH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEC-CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCH
T ss_conf             89999999998646457789987885546767401036-89758999999999999999999871766763021244889


Q ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             2899999998326999979999970-88989988999999999999999
Q gi|254780915|r  575 CFKEKYLNILRAGNSKHYSELLLPL-NINLSDPNFWERGLQTVEKMIDD  622 (626)
Q Consensus       575 ~~~~~y~~~L~~Ggs~~~~el~k~~-G~d~~~~~~~~~~~~~~~~~i~~  622 (626)
                      .++++|+++|+.|||+++.|++|.| |.+-.+++++.+-++.+.+|+++
T Consensus       549 ~ag~~~~~~L~~G~S~~~~e~l~~~~G~~~~s~~all~yf~pl~~wl~~  597 (615)
T 1r42_A          549 EAGQKLFNMLRLGKSEPWTLALENVVGAKNMNVRPLLNYFEPLFTWLKD  597 (615)
T ss_dssp             HHHHHHHHHHTTTTSSCHHHHHHHHHSSSSCCSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             9999999998575998989999997198889859999999999999999


No 10 
>3nxq_A Angiotensin-converting enzyme; dicarboxy zinc metallopeptidase, hydrolase, hydrolase-hydrol inhibitor complex; HET: RX4 NAG FUC BMA P6G PG4; 1.99A {Homo sapiens} PDB: 2c6n_A* 2c6f_A*
Probab=100.00  E-value=0  Score=389.63  Aligned_cols=514  Identities=11%  Similarity=-0.008  Sum_probs=366.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
Q ss_conf             49989999999999999999999999998642057991899999999999999999988741698871998999999846
Q gi|254780915|r   81 QKNCHSLGAAIAEYERICELIGRIASYAMLSYNCNLSSPTIRKFYTDINAKLADFEKVLIFFALEINTLDEALLEQSYAQ  160 (626)
Q Consensus        81 ~~~~~~l~~~l~~~e~i~~~l~rv~~ya~l~~s~dt~d~~~~~~~~~~~~~~s~~~~~l~~~~~e~~~l~e~~l~~~~~~  160 (626)
                      ..+......++..+++..+.+....++|++.+++|++|+. +....+++...+++...+.....++....-        .
T Consensus        11 ~~~e~~A~~fl~~~~~~~~~~~~~~~~Asw~y~tnitde~-~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~--------~   81 (629)
T 3nxq_A           11 SADEAGAQLFAQSYQSSAEQVLFQSVAASWAHDTNITAEN-ARRQEEAALLSQEFAEAWGQKAKELYEPIW--------Q   81 (629)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTTG--------G
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------H
T ss_conf             9899999999999999999999998897899871698889-999999999999999999999999865554--------2


Q ss_pred             CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHCCCH
Q ss_conf             900111179999999742331716799876630010003677777764444332210034-----752332135418887
Q gi|254780915|r  161 DPLTLKYSAWIKNIRKIKKHLLSNDMECLLSDTSQVGREALKRFFCENIESLRFKINDQK-----IPLTKAYKSFFDSDR  235 (626)
Q Consensus       161 ~~~l~~y~~~~~~l~~~~~~~l~~~~E~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~dr  235 (626)
                      ...-..+++.+..+....++.++++.++.++.+......        ..+..+....+..     ........+..+.|+
T Consensus        82 ~~~d~~~kr~l~~l~~~~~~~l~~~~~~el~~l~~~m~~--------iy~~~~v~~~~~~~~~~~l~p~~~~i~~~srd~  153 (629)
T 3nxq_A           82 QFTDPQLRRIIGAVRTLGSANLPLAKRQQYNALLSQMSR--------IYSTAKVCLPQKTATCWSLDPDLTNILASSRSY  153 (629)
T ss_dssp             GCSCHHHHHHHHHHTCCGGGGSCHHHHHHHHHHHHHHHH--------HHHHCEEEC---CCCEEETTTHHHHHHHHCCCH
T ss_pred             CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH--------HHHCEEEECCCCCCCHHHCCCCHHHHHHHCCCH
T ss_conf             115899999999998735125998999999999999999--------986426402899851540464012266548899


Q ss_pred             HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC--HHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf             6799999999998650542169999998666788654278999889762222589--89999999987630628999999
Q gi|254780915|r  236 EVRKSAAKALSHTFNKSSHIFSFITNTLAKDEEIQDRWRKYEKIADSRHLSNNVE--PYVIEALMQSVKNYYPKTSHRYY  313 (626)
Q Consensus       236 ~~Rk~a~~a~~~~~~~~~~~~a~il~~iv~~r~e~A~llGy~s~~~~~l~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~  313 (626)
                      +.|+.+|.++.....   ..+..++.++|++|++.|+++||+|++++.+...+.+  ...++.+...+..... ..+.+.
T Consensus       154 ~e~~~aw~~w~~~~~---~~~~~~~~~lv~Lrne~A~~lGf~n~~d~~r~~y~~~~~~~~~e~l~~~v~Pl~~-~l~~~~  229 (629)
T 3nxq_A          154 AMLLFAWEGWHNAAG---IPLKPLYEDFTALSNEAYKQDGFTDTGAYWRSWYNSPTFEDDLEHLYQQLEPLYL-NLHAFV  229 (629)
T ss_dssp             HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHTTTCSSHHHHHHHTTCCTTHHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred             HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_conf             999999999999875---7778899999999999999859875889876023467799999999999999999-999999


Q ss_pred             HHH-----------------HHHCCCCCCCHHHHHHCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHH--------
Q ss_conf             999-----------------987088753123444025655--47779989999999986666328999999--------
Q gi|254780915|r  314 ELK-----------------KKWLKLDTMYFWDRLAPLPGT--SQDIIPFEVARDLVLQSYAKFSPQMSIIA--------  366 (626)
Q Consensus       314 ~~~-----------------~~~lg~~~l~~wD~~~~~~~~--~~~~~~~ee~~~~v~~~~~~~~~e~~~~~--------  366 (626)
                      +.+                 +.++|...+++||..++....  ..+.++..............+..+..+++        
T Consensus       230 r~~L~~~yg~~~~~~~~~i~a~llG~~~~~~w~~~~~l~~p~p~~~~~d~~~~~~~~~~~~~~m~~~a~~ff~sl~~~~~  309 (629)
T 3nxq_A          230 RRALHRRYGDRYINLRGPIPAHLLGDMWAQSWENIYDMVVPFPDKPNLDVTSTMLQQGWQATHMFRVAEEFFTSLELSPM  309 (629)
T ss_dssp             HHHHHHHHCTTTCCTTSCEETTSSSSTTSCCCGGGHHHHCSCTTSCCCCCHHHHHHHTCCHHHHHHHHHHHHHHTTCCCC
T ss_pred             HHHHHHHHCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             99999872601025545331555102764000000344578888887667999987055699999999999998642213


Q ss_pred             HHHHHCCCCCHHCCCCCCCCCCCCCC--CCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf             98642485020103799874354766--6777510103653324679999998458999996125687765780059998
Q gi|254780915|r  367 EKFFTHNWIDAPQYDGKGSGAFAHGT--IPSVHPYILLNYLGKPQDVMTLAHELGHGIHFVLSSETQGILTNNSSLTLAE  444 (626)
Q Consensus       367 ~~~~~~~~iD~~~r~gKr~GA~~~~~--~~~~~~~I~~N~~~~~~dv~TL~HE~GHa~H~~ls~~~~~~~~~~~~~~~aE  444 (626)
                      ...+..+|+|..||+||++|++|+++  +..++|+|+||+.++++||.|||||||||+|++++++ +|+...+.+.+.+|
T Consensus       310 ~~~f~~~~~d~~p~dgk~~~~~~sa~~~~~~~~~rI~~~~~~t~~dv~Tl~HE~GHa~h~~~~~~-qp~~~r~~a~~~~e  388 (629)
T 3nxq_A          310 PPEFWEGSMLEKPADGREVVCHASAWDFYNRKDFRIKQCTRVTMDQLSTVHHEMGHIQYYLQYKD-LPVSLRRGANPGFH  388 (629)
T ss_dssp             CHHHHHHCBCSCCSSSCCCCCSCEEEECSSSSCEEEECCCCSSHHHHHHHHHHHHHHHHHHHSTT-SCGGGCSCSSHHHH
T ss_pred             CHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCHHHCCCCCCHHH
T ss_conf             17899998870343478988763201466788763104777748899999999999999999705-86564078983088


Q ss_pred             HHHHHHHHHH---HHHHHC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf             8688899999---999841------3899899999999986206999999999999999997212016899989999999
Q gi|254780915|r  445 TASIFGETLT---FDSLLQ------AASSKEERKILLANKIEDMLNSIVRQISFYDFELKLHTERRSTGDIPTHRINEIW  515 (626)
Q Consensus       445 ~~S~~~E~~~---~~~~~~------~~~~~~~~~~ll~~~~~~~~~~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~  515 (626)
                      .|+..++.|.   ++|+..      ...+.+.....+..+..+.+.++..+++++.|++.+|+     +.++++++++.|
T Consensus       389 ea~~~~~~l~~~t~~~l~~~~l~~~~~~~~e~~~~~l~~~al~~i~~lp~~~~~d~f~~~v~~-----g~~t~~d~n~~w  463 (629)
T 3nxq_A          389 EAIGDVLALSVSTPEHLHKIGLLDRVTNDTESDINYLLKMALEKIAFLPFGYLVDQWRWGVFS-----GRTPPSRYNFDW  463 (629)
T ss_dssp             HHHHHHHHHHHTSHHHHHHTTSSCCCCCSHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-----TSSCGGGHHHHH
T ss_pred             HHHHHHHHHHHHCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCHHHHHHHH
T ss_conf             899999999852889997458843446788899999999999889997999999999999867-----999868899999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-------------CHHHHHHHHH
Q ss_conf             999998607763458878885001525410667525899999999999999999567-------------3328999999
Q gi|254780915|r  516 LETQKESLGPAFDLSDLEYGSFWMMVPHFIESSFYVYAYAFGNCLVNSLYDIYKSNT-------------VDCFKEKYLN  582 (626)
Q Consensus       516 ~~~~~~~~g~~~~~~~~~~~~~w~~~~H~y~~~fY~y~Y~~~~~~a~~l~~~~~~~~-------------~~~~~~~y~~  582 (626)
                      +++.++|.|...+++..+..+.|..|.||++ ++|||.|.||+|++.++|..+.+.+             .+.+++++++
T Consensus       464 w~l~~~yqgi~pp~~r~~~~fd~~a~~Hi~~-~~~Y~~Y~~s~vl~fq~~~~~~~~~~~~~pl~~cd~~~s~~aG~~l~~  542 (629)
T 3nxq_A          464 WYLRTKYQGICPPVTRNETHFDAGAKFHVPN-VTPYIRYFVSFVLQFQFHEALCKEAGYEGPLHQCDIYRSTKAGAKLRK  542 (629)
T ss_dssp             HHHHHHHHCEECSSCCCTTCCGGGGSTTTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCSCGGGCCCTTCHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCCCCCHHHCCCCHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             9987571787899888822358340011379-954799999999999999999987276687400465488999999999


Q ss_pred             HHHCCCCCCHHHHHHHC-CC-CCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             98326999979999970-88-9899889999999999999998
Q gi|254780915|r  583 ILRAGNSKHYSELLLPL-NI-NLSDPNFWERGLQTVEKMIDDV  623 (626)
Q Consensus       583 ~L~~Ggs~~~~el~k~~-G~-d~~~~~~~~~~~~~~~~~i~~~  623 (626)
                      +|+.|||+++.|+++.| |. +|+ ++++.+=++.+..|+++-
T Consensus       543 ~L~~G~S~~w~e~l~~~~G~~~~~-~~all~yf~pl~~wl~~~  584 (629)
T 3nxq_A          543 VLRAGSSRPWQEVLKDMVGLDALD-AQPLLKYFQLVTQWLQEQ  584 (629)
T ss_dssp             HHHHTTSSCHHHHHHHHHSCSSCC-SHHHHHHHHHHHHHHHHH
T ss_pred             HHHCCCCCCHHHHHHHHHCCCCCC-HHHHHHHHHHHHHHHHHH
T ss_conf             983769989899999980987898-699999999999999999


No 11 
>3dwc_A TCMCP-1, metallocarboxypeptidase; cowrin family of metallocarboxypeptidases, hydrolase; 2.10A {Trypanosoma cruzi}
Probab=99.95  E-value=3.7e-23  Score=181.62  Aligned_cols=337  Identities=16%  Similarity=0.124  Sum_probs=211.3

Q ss_pred             HHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHCCCCC---HHHHHHHH--CCCCHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             9999999999865054-2169999998666788654278999---88976222--2589899999999876306289999
Q gi|254780915|r  238 RKSAAKALSHTFNKSS-HIFSFITNTLAKDEEIQDRWRKYEK---IADSRHLS--NNVEPYVIEALMQSVKNYYPKTSHR  311 (626)
Q Consensus       238 Rk~a~~a~~~~~~~~~-~~~a~il~~iv~~r~e~A~llGy~s---~~~~~l~~--~~~~~~~~~~l~~~~~~~~~~~~~~  311 (626)
                      +-.+..++.+..+++. ..+.+.+.+++.++.+.|+.+|+++   ..+..+..  ...+.+.++.++..+.....++..+
T Consensus       109 ~~~~~~~W~~Ar~~~df~~f~p~L~~~v~l~~e~A~~~g~~~~~~~Yd~lld~yepg~~~~~ld~lF~~lk~~~~~l~~~  188 (505)
T 3dwc_A          109 TTKAHQVWKTCREKNDFAGFLPTLKELIALFREEGKLRAGNSGKHPYEALVDIYEPGMTLQRLDEIFGNVRSWLPELLKE  188 (505)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             76689999999983478889999999999999999985010478777776641589986899999999999989999999


Q ss_pred             HHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCC
Q ss_conf             99999987088753123444025655477799899999999866663289999999864248502010379987435476
Q gi|254780915|r  312 YYELKKKWLKLDTMYFWDRLAPLPGTSQDIIPFEVARDLVLQSYAKFSPQMSIIAEKFFTHNWIDAPQYDGKGSGAFAHG  391 (626)
Q Consensus       312 ~~~~~~~~lg~~~l~~wD~~~~~~~~~~~~~~~ee~~~~v~~~~~~~~~e~~~~~~~~~~~~~iD~~~r~gKr~GA~~~~  391 (626)
                      ........        ++    ........++.+....+.......+|.        .+..      .|.++..+.+|.+
T Consensus       189 i~~~~~~~--------~~----~~~~~~g~~~~~~q~~l~~~~~~~~G~--------d~~~------grld~s~hpf~~~  242 (505)
T 3dwc_A          189 VQEKQKAL--------GE----TVLEPKGPFPVSKQEALCRFFMDVWKF--------DFDG------GRLDVSAHPFCGN  242 (505)
T ss_dssp             HHHHHHHH--------TC----CCCCCCCCCCHHHHHHHHHHHHHHTTC--------CTTS------EEEEECSSCCEEE
T ss_pred             HHHHCCCC--------CC----CCCCCCCCCCHHHHHHHHHHHHHHCCC--------CCCC------CCCCCCCCCCCCC
T ss_conf             98704577--------74----335767999999999999999997398--------8667------8777888874467


Q ss_pred             CCCCCCCEEECCCCC--CHHHHHHHHHHHHHHHHHHHH--CCC-CCCCCCCCHHHHHHHHHHHHHHHHH------HH---
Q ss_conf             667775101036533--246799999984589999961--256-8776578005999886888999999------99---
Q gi|254780915|r  392 TIPSVHPYILLNYLG--KPQDVMTLAHELGHGIHFVLS--SET-QGILTNNSSLTLAETASIFGETLTF------DS---  457 (626)
Q Consensus       392 ~~~~~~~~I~~N~~~--~~~dv~TL~HE~GHa~H~~ls--~~~-~~~~~~~~~~~~aE~~S~~~E~~~~------~~---  457 (626)
                      . + ...+|.+++..  ....+.|++||+|||+|....  +.. ..+.+..++|+++|.+|+|+|+|+.      .+   
T Consensus       243 ~-~-~DvRitt~~~e~~~~~~l~~~lHE~GHalYe~~l~~~~~~~~~~g~~~s~~~hEsqS~~~En~i~~s~~f~~~~~~  320 (505)
T 3dwc_A          243 S-K-EDVRITTKYTETEFVTSLLGVIHETGHAKYEQNCGPKGFETQPVCMARSLGVHEGQSLFAEMQIGRSGAFMEFLAP  320 (505)
T ss_dssp             E-T-TEEEEEECCBTTBCHHHHHHHHHHHHHHHHHHTCSCTTCTTSTTSSCSCHHHHHHHHHHHHTTTTTSHHHHHHHHH
T ss_pred             C-C-CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH
T ss_conf             7-5-5564304652565422656403120088997278875556771436766341157999999981688999998899


Q ss_pred             -HHCCC-----CCHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             -84138-----998999999999-------86206999999999999999997212016899989999999999998607
Q gi|254780915|r  458 -LLQAA-----SSKEERKILLAN-------KIEDMLNSIVRQISFYDFELKLHTERRSTGDIPTHRINEIWLETQKESLG  524 (626)
Q Consensus       458 -~~~~~-----~~~~~~~~ll~~-------~~~~~~~~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~~~~~~~~~g  524 (626)
                       +.+.+     .+.+...+....       .-.+.+......+....+|..+.     ++.++++++.+.|.+..++|.|
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~n~v~~~lir~~adev~y~~hi~lr~~~e~~~~-----~g~~~~~dl~~~w~~~~~~ylG  395 (505)
T 3dwc_A          321 RLVEYFGDQPAFTSSNMKRVIQRVSPGLIRIDADELCYPLHVMLRYEIERDLM-----DGNIEAEEVPRVWNEKMKSYLG  395 (505)
T ss_dssp             HHHHHHCCCTTCSHHHHHHHHTCCCCCSCGGGCCTTTHHHHHHHHHHHHHHHH-----HTSSCGGGHHHHHHHHHHHHHS
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHHHHHHCC
T ss_conf             99832643111589999998643042499899999999999978988888750-----6887666699999999986089


Q ss_pred             CCCCCCCCCCCCEEECCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHCCC-------------HHHHHHHH-HHHHCCCC
Q ss_conf             7634588788850015254106675-258999999999999999995673-------------32899999-99832699
Q gi|254780915|r  525 PAFDLSDLEYGSFWMMVPHFIESSF-YVYAYAFGNCLVNSLYDIYKSNTV-------------DCFKEKYL-NILRAGNS  589 (626)
Q Consensus       525 ~~~~~~~~~~~~~w~~~~H~y~~~f-Y~y~Y~~~~~~a~~l~~~~~~~~~-------------~~~~~~y~-~~L~~Ggs  589 (626)
                      -..+..+   .-.+.++.|++.+.| ||++|+||.++|+++|..++++.+             ...++.++ +|++.|||
T Consensus       396 i~~p~~~---~~g~lqd~Hw~~g~~gYfpsY~lg~v~aaq~~~~~~~~~~~~~~~~~~~~g~~~~~~~wl~e~i~~~G~s  472 (505)
T 3dwc_A          396 LETLGND---KEGCLQDVHWSGGMFGYFPTYSLGAMVAAQLMSCVRRELGEEVVDDCIRKGDLGKILAKQNEKIWQHGSS  472 (505)
T ss_dssp             CCCTTCC---TTTTTSCSTTTTTCCSCTHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCHHHHHHHHHHTGGGTTS
T ss_pred             CCCCCCC---CCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCC
T ss_conf             8999988---7788851020188540468899999999999999998678877057775166599999999999737189


Q ss_pred             CCHHHHHHHC-CCCCCCHHHHH
Q ss_conf             9979999970-88989988999
Q gi|254780915|r  590 KHYSELLLPL-NINLSDPNFWE  610 (626)
Q Consensus       590 ~~~~el~k~~-G~d~~~~~~~~  610 (626)
                      .+|.|+++.+ |..++...|++
T Consensus       473 ~~~~ell~~~tG~~~~~~~~l~  494 (505)
T 3dwc_A          473 LTTDELLRQATGETLNPEHYRR  494 (505)
T ss_dssp             SCHHHHHHHHHSSSCCTHHHHH
T ss_pred             CCHHHHHHHHHCCCCCHHHHHH
T ss_conf             9989999997599998699999


No 12 
>1ka2_A M32 carboxypeptidase; hexxh motif, M32 family, metallopeptidase; 2.20A {Pyrococcus furiosus} SCOP: d.92.1.5 PDB: 1k9x_A 1ka4_A
Probab=99.90  E-value=2.9e-18  Score=146.78  Aligned_cols=336  Identities=17%  Similarity=0.186  Sum_probs=227.6

Q ss_pred             HHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHCCCCCHH-HHHHH--HCCCCHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             7999999999986505-4216999999866678865427899988-97622--225898999999998763062899999
Q gi|254780915|r  237 VRKSAAKALSHTFNKS-SHIFSFITNTLAKDEEIQDRWRKYEKIA-DSRHL--SNNVEPYVIEALMQSVKNYYPKTSHRY  312 (626)
Q Consensus       237 ~Rk~a~~a~~~~~~~~-~~~~a~il~~iv~~r~e~A~llGy~s~~-~~~l~--~~~~~~~~~~~l~~~~~~~~~~~~~~~  312 (626)
                      .+-.+..++.++-.++ -..+++.|.+++.++.+.|+.+|++... +.-|.  ...++.+.++.++..++...+|+..+.
T Consensus       111 ~~s~~~~~W~~Ar~~nDf~~f~p~Lekli~L~re~A~~~~~~~~pYDaLLd~yE~g~t~~~ld~~F~~Lk~~L~pll~~i  190 (499)
T 1ka2_A          111 TTSLATKAWEEAKAKDDFSKFEPWLDKIISLAKRAAEYLGYEEEPYDALLDLYEEGLRTRDVEKMFEVLEKKLKPLLDKI  190 (499)
T ss_dssp             HHHHHHHHHHHHHHTTCGGGTHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             86268999999731035999999999999999999998277788555556632899989999999999898899999999


Q ss_pred             HHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCC
Q ss_conf             99999870887531234440256554777998999999998666632899999998642485020103799874354766
Q gi|254780915|r  313 YELKKKWLKLDTMYFWDRLAPLPGTSQDIIPFEVARDLVLQSYAKFSPQMSIIAEKFFTHNWIDAPQYDGKGSGAFAHGT  392 (626)
Q Consensus       313 ~~~~~~~lg~~~l~~wD~~~~~~~~~~~~~~~ee~~~~v~~~~~~~~~e~~~~~~~~~~~~~iD~~~r~gKr~GA~~~~~  392 (626)
                      ....+    ...         ........|+.+....+....+..+|.++.       ..+      |-....+.||.++
T Consensus       191 ~~~~~----~~~---------~~~~~~~~f~~~~Q~~~~~~~~~~~Gfd~~-------~~G------Rld~s~HPF~~~~  244 (499)
T 1ka2_A          191 LEEGK----VPR---------EHPLEKEKYEREWMERVNLWILQKFGFPLG-------TRA------RLDVSAHPFTTEF  244 (499)
T ss_dssp             HHTTC----SCS---------CCGGGTCBCCHHHHHHHHHHHHHHHTCCBT-------TTE------EEEECSSCCEEEE
T ss_pred             HHCCC----CCC---------CCCCCCCCCCHHHHHHHHHHHHHHCCCCCH-------HCC------EEEECCCCCCCCC
T ss_conf             85457----898---------772003578899999987999974487701-------133------1441366211368


Q ss_pred             CCCCCCEEECCCCCC--HHHHHHHHHHHHHHHHHHHHC---CCCCCCCCCCHHHHHHHHHHHHHHHHH------HHH---
Q ss_conf             677751010365332--467999999845899999612---568776578005999886888999999------998---
Q gi|254780915|r  393 IPSVHPYILLNYLGK--PQDVMTLAHELGHGIHFVLSS---ETQGILTNNSSLTLAETASIFGETLTF------DSL---  458 (626)
Q Consensus       393 ~~~~~~~I~~N~~~~--~~dv~TL~HE~GHa~H~~ls~---~~~~~~~~~~~~~~aE~~S~~~E~~~~------~~~---  458 (626)
                      .+ ...+|..++..+  ...+....||.|||++-..-.   ..+| .+...++-+.|.-|-|+|+.+.      .+.   
T Consensus       245 ~~-~DvRittr~~~~~~~~~l~s~iHE~GHalYeqgl~~~~~~~p-l~~~~s~giHESQs~~~En~vgrs~~f~~~~~p~  322 (499)
T 1ka2_A          245 GI-RDVRITTRYEGYDFRRTILSTVHEFGHALYELQQDERFMFTP-IAGGVSLGIHESQSRFWENIIGRSKEFVELIYPV  322 (499)
T ss_dssp             ET-TEEEEEECCCSBCTHHHHHHHHHHHHHHHHHHTCCGGGTTST-TSSCCCHHHHHHHHHHHHTTTTTSHHHHHHHHHH
T ss_pred             CC-CCEEEEEEECCCCHHHHHHHHHHCCCHHHHHCCCCHHHCCCC-CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
T ss_conf             87-752465100454168899999850005676438987757776-6678775513314589988884689899987167


Q ss_pred             -------HCCCCCHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             -------41389989999999------99862069999999999999999972120168999899999999999986077
Q gi|254780915|r  459 -------LQAASSKEERKILL------ANKIEDMLNSIVRQISFYDFELKLHTERRSTGDIPTHRINEIWLETQKESLGP  525 (626)
Q Consensus       459 -------~~~~~~~~~~~~ll------~~~~~~~~~~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~~~~~~~~~g~  525 (626)
                             ++....++....+-      -....+-.......+.+.++|+++.+     ++++++++.+.|++..++|.|.
T Consensus       323 ~~~~f~~~~~~~~~~~y~~~n~v~~~~ir~~ADEvty~lHi~lR~eiEk~l~~-----g~l~v~dlp~~W~~~~~~ylgi  397 (499)
T 1ka2_A          323 LKENLPFMSNYTPEDVYLYFNIVRPDFIRTEADVVTYNFHILLRFKLERLMVS-----EEIKAKDLPEMWNDEMERLLGI  397 (499)
T ss_dssp             HHHHCGGGGGCCHHHHHHHHTCCCCCSCGGGCCTTTHHHHHHHHHHHHHHHHH-----SCCCGGGHHHHHHHHHHHHHSC
T ss_pred             HHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHEECCHHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHHHHHCCC
T ss_conf             89757876888899999876550610454430131221379999999999975-----9998678999999999997599


Q ss_pred             CCCCCCCCCCCEEECCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHCCC-----------HHHHHHHH--HHHHCCCCCC
Q ss_conf             634588788850015254106675-258999999999999999995673-----------32899999--9983269999
Q gi|254780915|r  526 AFDLSDLEYGSFWMMVPHFIESSF-YVYAYAFGNCLVNSLYDIYKSNTV-----------DCFKEKYL--NILRAGNSKH  591 (626)
Q Consensus       526 ~~~~~~~~~~~~w~~~~H~y~~~f-Y~y~Y~~~~~~a~~l~~~~~~~~~-----------~~~~~~y~--~~L~~Ggs~~  591 (626)
                      .++-    ..-+|.+-.|.+.++| |+-+|++|.+.|+++|.+.+++-+           ....+ |+  +|.+.|++.+
T Consensus       398 ~p~~----d~~G~lQDiHw~~g~fGYfptY~LG~i~aaQ~~~~~~~~~~~~~~~~~~g~~~~~~~-wL~~~i~~~G~~~~  472 (499)
T 1ka2_A          398 RPRK----YSEGILQDIHWAHGSIGYFPTYTIGTLLSAQLYYHIKKDIPDFEEKVAKAEFDPIKA-WLREKIHRWGSIYP  472 (499)
T ss_dssp             CCSS----GGGTTTSCSHHHHTCTTCTHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHTCCHHHHH-HHHHHTGGGTTSSC
T ss_pred             CCCC----CCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHH-HHHHHHHHCCCCCC
T ss_conf             9998----767677556561687677368999999999999999986758888887289699999-99999985506899


Q ss_pred             HHHHHHHC-CCCCCCHHHHHH
Q ss_conf             79999970-889899889999
Q gi|254780915|r  592 YSELLLPL-NINLSDPNFWER  611 (626)
Q Consensus       592 ~~el~k~~-G~d~~~~~~~~~  611 (626)
                      |.|+++.+ |-.++ |+++-+
T Consensus       473 ~~ell~~~TGe~l~-~~~~~~  492 (499)
T 1ka2_A          473 PKELLKKAIGEDMD-AEYFVR  492 (499)
T ss_dssp             HHHHHHHHHSSCCC-THHHHH
T ss_pred             HHHHHHHHHCCCCC-HHHHHH
T ss_conf             89999998689999-899999


No 13 
>3hq2_A Bacillus subtilis M32 carboxypeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc; 2.90A {Bacillus subtilis}
Probab=99.88  E-value=9.1e-19  Score=150.33  Aligned_cols=334  Identities=17%  Similarity=0.162  Sum_probs=221.9

Q ss_pred             HHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHCCCCC-HHHHHHH--HCCCCHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf             9999999999865054-2169999998666788654278999-8897622--2258989999999987630628999999
Q gi|254780915|r  238 RKSAAKALSHTFNKSS-HIFSFITNTLAKDEEIQDRWRKYEK-IADSRHL--SNNVEPYVIEALMQSVKNYYPKTSHRYY  313 (626)
Q Consensus       238 Rk~a~~a~~~~~~~~~-~~~a~il~~iv~~r~e~A~llGy~s-~~~~~l~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~  313 (626)
                      +-.+..++.++-+++. ..+.+.|.+++.+..+.|+.+|+.. ..|.-+.  .-.++.+.++.++..+....+|+..+..
T Consensus       110 ~s~a~~~W~~AR~~nDf~~f~p~L~~lv~L~re~A~~~~~~~~pYDaLLd~yEpG~t~~~id~~F~~Lk~~l~~Ll~~i~  189 (501)
T 3hq2_A          110 CSKAETAWEEAKGKSDFSLFSPYLEQLIEFNKRFITYWGYQEHPYDALLDLFEPGVTVKVLDQLFAELKEAIIPLVKQVT  189 (501)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHCCSSCTTHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             61109999998611678989999999999999999974468988999998517999899999889998888999999998


Q ss_pred             HHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCC
Q ss_conf             99998708875312344402565547779989999999986666328999999986424850201037998743547666
Q gi|254780915|r  314 ELKKKWLKLDTMYFWDRLAPLPGTSQDIIPFEVARDLVLQSYAKFSPQMSIIAEKFFTHNWIDAPQYDGKGSGAFAHGTI  393 (626)
Q Consensus       314 ~~~~~~lg~~~l~~wD~~~~~~~~~~~~~~~ee~~~~v~~~~~~~~~e~~~~~~~~~~~~~iD~~~r~gKr~GA~~~~~~  393 (626)
                      ....              .+........||.+.-..+...        +.+.+...+..+++|      +..+.||.++.
T Consensus       190 ~~~~--------------~~~~~~~~~~f~~~~Q~~l~~~--------~~~~~Gfd~~~GRlD------~S~HPF~~~~~  241 (501)
T 3hq2_A          190 ASGN--------------KPDTSFITKAFPKEKQKELSLY--------FLQELGYDFDGGRLD------ETVHPFATTLN  241 (501)
T ss_dssp             SSTT--------------CCCCTTTSSCCCHHHHHHHHHH--------HHHHTTCCTTSCCEE------ECSSCCEEEEE
T ss_pred             HCCC--------------CCCCCCCCCCCCHHHHHHHHHH--------HHHHHCCCCCCCCCC------CCCCCCCCCCC
T ss_conf             6357--------------9985424689999999999999--------999819781247666------66665434788


Q ss_pred             CCCCCEEECCCCCC--HHHHHHHHHHHHHHHHHHHHC-C--CCCCCCCCCHHHHHHHHHHHHHHHHHH------------
Q ss_conf             77751010365332--467999999845899999612-5--687765780059998868889999999------------
Q gi|254780915|r  394 PSVHPYILLNYLGK--PQDVMTLAHELGHGIHFVLSS-E--TQGILTNNSSLTLAETASIFGETLTFD------------  456 (626)
Q Consensus       394 ~~~~~~I~~N~~~~--~~dv~TL~HE~GHa~H~~ls~-~--~~~~~~~~~~~~~aE~~S~~~E~~~~~------------  456 (626)
                      + ...+|.+++..+  .......+||+|||+|..--. +  .+| .+...++-+.|.-|-|.|+.+..            
T Consensus       242 ~-~DvRiTtry~e~d~~~~l~~~~HE~GHalYeqg~~~~~~~~p-~~~~~s~giHEsqs~~~E~~igrs~~F~~~~~~~~  319 (501)
T 3hq2_A          242 R-GDVRVTTRYDEKDFRTAIFGTIHECGHAIYEQNIDEALSGTN-LSDGASMGIHESQSLFYENFIGRNKHFWTPYYKKI  319 (501)
T ss_dssp             T-TEEEEEECCCTTCTHHHHHHHHHHHHHHHHHTTSCGGGTTSS-SSSCSCHHHHHHHHHHHHTTTTTSGGGGTTTHHHH
T ss_pred             C-CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCC-CCCCCCCEEECCHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf             7-740345653344326779999877669999827856545584-56776110306508899988716877899989999


Q ss_pred             --HH---HCCCCCHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             --98---41389989999999998------62069999999999999999972120168999899999999999986077
Q gi|254780915|r  457 --SL---LQAASSKEERKILLANK------IEDMLNSIVRQISFYDFELKLHTERRSTGDIPTHRINEIWLETQKESLGP  525 (626)
Q Consensus       457 --~~---~~~~~~~~~~~~ll~~~------~~~~~~~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~~~~~~~~~g~  525 (626)
                        ..   .+....++....+...+      -.+-.......+.+.++|..+.+     +.++++++.+.|.+..++|.|-
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~n~v~p~~irv~aDelty~~hi~lr~elE~~l~~-----g~l~v~Dlp~~W~~~~~~ylgi  394 (501)
T 3hq2_A          320 QEASPVQFKDISLDDFVRAINESKPSFIRVEADELTYPLHIIIRYEIEKAIFS-----NEVSVEDLPSLWNQKYQDYLGI  394 (501)
T ss_dssp             HHHSTTTTTTCCHHHHHHHHTCCCCCSCGGGCCTTTHHHHHHHHHHHHHHHHT-----TCSCGGGHHHHHHHHHHHHHSC
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHHHHHCCC
T ss_conf             97544234679999999998762613333122587788899999999999975-----9998677899999999996798


Q ss_pred             CCCCCCCCCCCEEECCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHCCC-----------HHHHHHHH-HHHHCCCCCCH
Q ss_conf             634588788850015254106675-258999999999999999995673-----------32899999-99832699997
Q gi|254780915|r  526 AFDLSDLEYGSFWMMVPHFIESSF-YVYAYAFGNCLVNSLYDIYKSNTV-----------DCFKEKYL-NILRAGNSKHY  592 (626)
Q Consensus       526 ~~~~~~~~~~~~w~~~~H~y~~~f-Y~y~Y~~~~~~a~~l~~~~~~~~~-----------~~~~~~y~-~~L~~Ggs~~~  592 (626)
                      ..    +....+|.+..|.+.++| |+.+|++|.+.|+++|..++++.+           ...+...+ +|.+.|++.+|
T Consensus       395 ~p----~~d~~g~lqdiHw~~g~~GYfpsY~lg~i~aaQ~~~a~~~~~~~~~~~~~~g~~~~~~~wL~e~i~~~G~~~~~  470 (501)
T 3hq2_A          395 TP----QTDAEGILQDVHWAGGDFGYFPSYALGYMYAAQLKQKMLEDLPEFDALLERGEFHPIKQWLTEKVHIHGKRKKP  470 (501)
T ss_dssp             CC----SSTTTTTTSCSTTTTTCTTCTHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHTCCHHHHHHHHHHTTTTTTSSCH
T ss_pred             CC----CCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH
T ss_conf             99----98778766401352786354388999999999999999985787778887068899999999999860468998


Q ss_pred             HHHHHHC-CCCCCCHHHHHH
Q ss_conf             9999970-889899889999
Q gi|254780915|r  593 SELLLPL-NINLSDPNFWER  611 (626)
Q Consensus       593 ~el~k~~-G~d~~~~~~~~~  611 (626)
                      .|+++.+ |-.++ |+++-+
T Consensus       471 ~el~~~~tGe~l~-~~~~~~  489 (501)
T 3hq2_A          471 LDIIKDATGEELN-VRYLID  489 (501)
T ss_dssp             HHHHHHHHSSSCC-HHHHHH
T ss_pred             HHHHHHHHCCCCC-HHHHHH
T ss_conf             9999998599999-899999


No 14 
>3hoa_A Thermostable carboxypeptidase 1; proline-rich loop, hydrolase; 2.10A {Thermus thermophilus HB27} PDB: 1wgz_A
Probab=99.79  E-value=1.5e-14  Score=120.24  Aligned_cols=336  Identities=15%  Similarity=0.132  Sum_probs=219.7

Q ss_pred             HHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHCCCC----------CHHHHHHH--HCCCCHHHHHHHHHHHH
Q ss_conf             679999999999865054-216999999866678865427899----------98897622--22589899999999876
Q gi|254780915|r  236 EVRKSAAKALSHTFNKSS-HIFSFITNTLAKDEEIQDRWRKYE----------KIADSRHL--SNNVEPYVIEALMQSVK  302 (626)
Q Consensus       236 ~~Rk~a~~a~~~~~~~~~-~~~a~il~~iv~~r~e~A~llGy~----------s~~~~~l~--~~~~~~~~~~~l~~~~~  302 (626)
                      ..+-++..+|.++-+++. ..+++.|.+++.+..+.|..+||.          +..|.-|.  ...++...++.++..++
T Consensus       110 ~~~s~a~~~W~~AR~~nDf~~F~P~Leklv~L~rE~A~~lg~~~~~~~~~~~~~pYDaLLd~YEpG~t~~~id~iF~~Lk  189 (509)
T 3hoa_A          110 QAESEAESFWEEARPRDDWRGFLPYLKRVYALTKEKAEVLFALPPAPGDPPYGELYDALLDGYEPGMRARELLPLFAELK  189 (509)
T ss_dssp             HHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHHHTSCCCTTSCCCCSHHHHHHHHHSTTCCHHHHHHHHHHHH
T ss_pred             HHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf             98601289999988558888888789999999999999975312334467789828899874189998899999999999


Q ss_pred             HCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCC
Q ss_conf             30628999999999987088753123444025655477799899999999866663289999999864248502010379
Q gi|254780915|r  303 NYYPKTSHRYYELKKKWLKLDTMYFWDRLAPLPGTSQDIIPFEVARDLVLQSYAKFSPQMSIIAEKFFTHNWIDAPQYDG  382 (626)
Q Consensus       303 ~~~~~~~~~~~~~~~~~lg~~~l~~wD~~~~~~~~~~~~~~~ee~~~~v~~~~~~~~~e~~~~~~~~~~~~~iD~~~r~g  382 (626)
                      ...+|+..+.....       .-       +........++.+.-..+        +.++.+.++--+..+.+|.     
T Consensus       190 ~~L~pLl~~I~~~~-------~~-------~~~~~l~~~~~~~~Q~~l--------~~~l~~~~GfD~~~GrlD~-----  242 (509)
T 3hoa_A          190 EGLKGLLDRILGSG-------KR-------PDTSILHRPYPVEAQRRF--------ALELLSACGYDLEAGRLDP-----  242 (509)
T ss_dssp             HHHHHHHHHHHTCS-------CC-------CCGGGGGSCCCHHHHHHH--------HHHHHHHHTCCGGGEEEEE-----
T ss_pred             HHHHHHHHHHHHCC-------CC-------CCCCCCCCCCCHHHHHHH--------HHHHHHHHCCCCCCCEEEE-----
T ss_conf             99999999998567-------89-------986545799999999999--------9999998196855652662-----


Q ss_pred             CCCCCCCCCCCCCCCCEEECCCCC--CHHHHHHHHHHHHHHHHHHHHCC-CC-CCCCCCCHHHHHHHHHHHHHHHH----
Q ss_conf             987435476667775101036533--24679999998458999996125-68-77657800599988688899999----
Q gi|254780915|r  383 KGSGAFAHGTIPSVHPYILLNYLG--KPQDVMTLAHELGHGIHFVLSSE-TQ-GILTNNSSLTLAETASIFGETLT----  454 (626)
Q Consensus       383 Kr~GA~~~~~~~~~~~~I~~N~~~--~~~dv~TL~HE~GHa~H~~ls~~-~~-~~~~~~~~~~~aE~~S~~~E~~~----  454 (626)
                       ..+.||.++.+ ...+|...|..  -...+....||.|||+.-.--.. .. .+.+..+++-+.|-.|-|+|+.+    
T Consensus       243 -S~HPF~~g~~~-~DvRITTry~e~d~~~~l~s~iHE~GHalYEqgl~~~~~~~plg~~~smgiHESQSr~~En~igrS~  320 (509)
T 3hoa_A          243 -TAHPFEIAIGP-GDVRITTRYYEDFFNAGIFGTLHEMGHALYEQGLPKEHWGTPRGDAVSLGVHESQSRTWENLVGRSL  320 (509)
T ss_dssp             -CSSCCEEEEET-TEEEEEECCBTTBHHHHHHHHHHHHHHHHHHHHSCGGGTTSGGGSCCCHHHHHHHHHHHHTTTTTSH
T ss_pred             -ECCCCCCCCCC-CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEECHHHHHHHHHHHHCCH
T ss_conf             -05886568998-8614552135645587899999987499998389987816955466620010287999999975689


Q ss_pred             --HHHHH----------CCCCCHHHHHHHHHH------HH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf             --99984----------138998999999999------86-206999999999999999997212016899989999999
Q gi|254780915|r  455 --FDSLL----------QAASSKEERKILLAN------KI-EDMLNSIVRQISFYDFELKLHTERRSTGDIPTHRINEIW  515 (626)
Q Consensus       455 --~~~~~----------~~~~~~~~~~~ll~~------~~-~~~~~~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~  515 (626)
                        |.++.          +.. +.+.....+..      +. .+-...-+..+.+.+.|.++-     +|.+++++|.++|
T Consensus       321 ~F~~~~~p~l~~~f~~~~~~-~~e~~y~~~n~V~ps~IRveADEvTY~lHI~lRyeiEk~li-----~g~l~v~dLp~~W  394 (509)
T 3hoa_A          321 GFWERFFPRAREVFASLGDV-SLEDFHFAVNAVEPSLIRVEADEVTYNLHILVRLELELALF-----RGELSPEDLPEAW  394 (509)
T ss_dssp             HHHHHHHHHHHHHCGGGTTC-CHHHHHHHTTCCCCCSCGGGCCTTTHHHHHHHHHHHHHHHH-----TTSCCGGGHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCC-CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCCHHHHHHHH
T ss_conf             99999879898757777889-99999999843387730012488989999999999999998-----5999857779999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHCCCH----------HHHHHHH--H
Q ss_conf             9999986077634588788850015254106675258-9999999999999999956733----------2899999--9
Q gi|254780915|r  516 LETQKESLGPAFDLSDLEYGSFWMMVPHFIESSFYVY-AYAFGNCLVNSLYDIYKSNTVD----------CFKEKYL--N  582 (626)
Q Consensus       516 ~~~~~~~~g~~~~~~~~~~~~~w~~~~H~y~~~fY~y-~Y~~~~~~a~~l~~~~~~~~~~----------~~~~~y~--~  582 (626)
                      .+..++|.|-.++  ....|+  .+=.|-..+.|=|+ +|+.|.+.|+++|...+++-++          +-.-.++  +
T Consensus       395 n~~~~~yLGi~p~--~d~~G~--LQDvHWs~G~fGYFPtY~lG~~~aaQl~~~~~~~~p~~~~~i~~G~~~~l~~WL~e~  470 (509)
T 3hoa_A          395 AEKYRDHLGVAPK--DYKDGV--MQDVHWAGGLFGYFPTYTLGNLYAAQFFQKAEAELGPLEPRFARGEFQPFLDWTRAR  470 (509)
T ss_dssp             HHHHHHHHSCCCS--SSTTTT--TSCSTTTTTCCSCTHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTCCHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCC--CCCCCC--CHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHH
T ss_conf             9999997499999--986654--453110278627525579999999999999998676788898758949999999998


Q ss_pred             HHHCCCCCCHHHHHHH-CCCCCCCHHHHHH
Q ss_conf             9832699997999997-0889899889999
Q gi|254780915|r  583 ILRAGNSKHYSELLLP-LNINLSDPNFWER  611 (626)
Q Consensus       583 ~L~~Ggs~~~~el~k~-~G~d~~~~~~~~~  611 (626)
                      |-+.|++.+|.||++. .|-.++ |+++-+
T Consensus       471 Ih~~G~~~~~~eLi~~~tGe~l~-~~~~~~  499 (509)
T 3hoa_A          471 IHAEGSRFRPRVLVERVTGEAPS-ARPFLA  499 (509)
T ss_dssp             TGGGTTSSCHHHHHHHHHSSCCC-SHHHHH
T ss_pred             HHHCCCCCCHHHHHHHHHCCCCC-HHHHHH
T ss_conf             86334689999999998499998-799999


No 15 
>3iuk_A Uncharacterized protein; PF05960.1, DUF885, M32 carboxypeptidase-like fold, PSI, MCSG, structural genomics; 1.85A {Arthrobacter aurescens TC1}
Probab=96.85  E-value=0.025  Score=33.09  Aligned_cols=168  Identities=15%  Similarity=0.089  Sum_probs=94.7

Q ss_pred             CHHHHHHHHHHH--HHHHHHHHHCCCCCC---C--CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf             246799999984--589999961256877---6--578005999886888999999998413899899999999986206
Q gi|254780915|r  407 KPQDVMTLAHEL--GHGIHFVLSSETQGI---L--TNNSSLTLAETASIFGETLTFDSLLQAASSKEERKILLANKIEDM  479 (626)
Q Consensus       407 ~~~dv~TL~HE~--GHa~H~~ls~~~~~~---~--~~~~~~~~aE~~S~~~E~~~~~~~~~~~~~~~~~~~ll~~~~~~~  479 (626)
                      .+.-..|++||.  ||-+|...+..+.+.   .  ..-....|+|==....|.++.+.-.  ..++..+...+...+.. 
T Consensus       379 ~~~~~~l~~HEa~PGHh~Q~~~~~~~~~~~~~~~~~~~~~~~~~EGWa~Y~E~l~~e~g~--~~dp~~~~~~l~~~l~r-  455 (562)
T 3iuk_A          379 TWSETTTVFHEGVPGHHLQVATATYRRELLNNWRRNVCWVSGHGEGWALYAEQLMLELGY--LKDPGDHMGMLDGQRMR-  455 (562)
T ss_dssp             CTTTHHHHHHHSTTTHHHHHHHHHHTGGGSCHHHHHTCCCHHHHHHHHHHHHHHHHHTTT--TCSHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHHH-
T ss_conf             541345542025670999999998720256088887604541565899972524875677--79989999999999999-


Q ss_pred             HHHHHHHHHHHHHHHHHHHH-----HHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHH
Q ss_conf             99999999999999999721-----2016899989999999999998607763458878885001525410667525899
Q gi|254780915|r  480 LNSIVRQISFYDFELKLHTE-----RRSTGDIPTHRINEIWLETQKESLGPAFDLSDLEYGSFWMMVPHFIESSFYVYAY  554 (626)
Q Consensus       480 ~~~~~~q~~~~~fe~~~h~~-----~~~~~~~t~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~w~~~~H~y~~~fY~y~Y  554 (626)
                             ......|..+|-.     ..+.+.+|.++-.++|.+    ..|.    .+......|.+.   ...|-|.-+|
T Consensus       456 -------a~r~vvD~glh~~~~~~~~~~~~~ws~~~a~~~~~~----~~~~----~~~~a~~e~~r~---~~~Pgq~~sY  517 (562)
T 3iuk_A          456 -------AARVVFDIGVHLELPVPERWGTGTWTPEKGFDFLKA----NLDI----SEGQLQFEFTRY---LGWPGQAPSY  517 (562)
T ss_dssp             -------HHHHHHHHHHHHTCBCCTTTCSSBCCHHHHHHHHHH----HCCC----CHHHHHHHHHHH---HHSTTSTTHH
T ss_pred             -------HHHHHHEHHHCCCCCCCCCCCCCCCCHHHHHHHHHH----HCCC----CHHHHHHHHHHH---HCCCHHHHHH
T ss_conf             -------999982200033555554334589999999999998----2599----879999999999---7096478889


Q ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf             9999999999999995673328999999983269999799999
Q gi|254780915|r  555 AFGNCLVNSLYDIYKSNTVDCFKEKYLNILRAGNSKHYSELLL  597 (626)
Q Consensus       555 ~~~~~~a~~l~~~~~~~~~~~~~~~y~~~L~~Ggs~~~~el~k  597 (626)
                      .+|.+--.++-..+++...-...++...+|+.|. . |..+++
T Consensus       518 ~~G~~~i~~lr~~~~~~~gf~~k~FHd~iL~~G~-~-P~~~l~  558 (562)
T 3iuk_A          518 KVGQRLWEQIRAELESREGFDLKSFHSKALNIGS-V-GLDVLR  558 (562)
T ss_dssp             HHHHHHHHHHHHHHHTSTTCCHHHHHHHHHTTCS-C-CHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC-C-CHHHHH
T ss_conf             9999999999999997569999999999996799-9-899999


No 16 
>3o0y_A Lipoprotein; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, lipid protein; 1.70A {Colwellia psychrerythraea}
Probab=95.39  E-value=0.13  Score=28.04  Aligned_cols=164  Identities=15%  Similarity=0.061  Sum_probs=94.0

Q ss_pred             CHHHHHHHHHHH--HHHHHHHHHCCCC--CCC-CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             246799999984--5899999612568--776-57800599988688899999999841389989999999998620699
Q gi|254780915|r  407 KPQDVMTLAHEL--GHGIHFVLSSETQ--GIL-TNNSSLTLAETASIFGETLTFDSLLQAASSKEERKILLANKIEDMLN  481 (626)
Q Consensus       407 ~~~dv~TL~HE~--GHa~H~~ls~~~~--~~~-~~~~~~~~aE~~S~~~E~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~  481 (626)
                      .+....|.+||.  ||-++..++..+.  |.. .......++|==....|.+..++-.-. .++..+...|...+...  
T Consensus       429 ~~~~~~l~~HE~~PGHh~Q~~~~~e~~~~~~~r~~~~~~~~~EGWAlYaE~l~~e~g~~~-~dp~~~lg~l~~~l~ra--  505 (609)
T 3o0y_A          429 KFGLKTLTYHEANPGHHWQIALNLDQAELPFLRRIAPYNAYTEGWALYSEQVAYELGMYE-NDPFGDLGRLQAELFRA--  505 (609)
T ss_dssp             GGGHHHHHHHHSTTTHHHHHHHHHTCTTSCHHHHTCCCHHHHHHHHHHHHHHHHHTTTTT-TCHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHH--
T ss_conf             577778899850378899999998615883898871674577559999998898736567-98899999999999999--


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH
Q ss_conf             99999999999999972120168999899999999999986077634588788850015254106675258999999999
Q gi|254780915|r  482 SIVRQISFYDFELKLHTERRSTGDIPTHRINEIWLETQKESLGPAFDLSDLEYGSFWMMVPHFIESSFYVYAYAFGNCLV  561 (626)
Q Consensus       482 ~~~~q~~~~~fe~~~h~~~~~~~~~t~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~w~~~~H~y~~~fY~y~Y~~~~~~a  561 (626)
                            .....|..+|..     ..|.++-.+.|.+    ..|.    .+......|.+.   ...|.++-+|.+|++.=
T Consensus       506 ------~RlvvD~glH~~-----gws~e~A~~~~~~----~~~~----~~~~a~~ev~Ry---~~~Pgqa~sY~~G~l~i  563 (609)
T 3o0y_A          506 ------VRLVVDTGLHDK-----RWTREQAISYMSE----QTGT----AESDVVAEIERY---MAWPGQALGYKLGMLKI  563 (609)
T ss_dssp             ------HHHHHHHHHHTS-----CCCHHHHHHHHHH----HHCC----CHHHHHHHHHHH---HHSTTGGGHHHHHHHHH
T ss_pred             ------HHHHHHHHHCCC-----CCCHHHHHHHHHH----HCCC----CHHHHHHHHHHH---HHCCHHHHHHHHHHHHH
T ss_conf             ------999953524037-----9999999999998----1699----859999999999---83928799999999999


Q ss_pred             HHHHHHHHHCCCHHH--HHHHHHHHHCCCCCCHHHHHH
Q ss_conf             999999995673328--999999983269999799999
Q gi|254780915|r  562 NSLYDIYKSNTVDCF--KEKYLNILRAGNSKHYSELLL  597 (626)
Q Consensus       562 ~~l~~~~~~~~~~~~--~~~y~~~L~~Ggs~~~~el~k  597 (626)
                      .+|-...++.-.+.|  .++-..+|+.|..  |..+++
T Consensus       564 ~~LR~~a~~~lG~~Fdlk~FHd~vL~~G~~--Pl~~l~  599 (609)
T 3o0y_A          564 LSLREQAKARLGDKFDLAEFHDVVLLNGAV--PMAVLS  599 (609)
T ss_dssp             HHHHHHHHHHHGGGCCHHHHHHHHHTTCSC--CHHHHH
T ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHHCCCC--CHHHHH
T ss_conf             999999999858889999999999967999--899999


No 17 
>1j7n_A Lethal factor precursor; anthrax, lethal toxin, zinc metalloprotease, mapkk, MEK; 2.30A {Bacillus anthracis} SCOP: d.92.1.14 d.92.1.14 d.166.1.1 PDB: 1jky_A 1pwp_A* 1pwq_A* 1pwv_A 1zxv_A* 1pwu_A* 1pww_A 1yqy_A*
Probab=94.31  E-value=0.053  Score=30.72  Aligned_cols=18  Identities=28%  Similarity=0.444  Sum_probs=14.4

Q ss_pred             HHHHHHHHHHHHHHHHHH
Q ss_conf             679999998458999996
Q gi|254780915|r  409 QDVMTLAHELGHGIHFVL  426 (626)
Q Consensus       409 ~dv~TL~HE~GHa~H~~l  426 (626)
                      .+..||+||||||+--+.
T Consensus       679 ~ds~tLIHEFGHAVDdli  696 (776)
T 1j7n_A          679 NDSEGFIHEFGHAVDDYA  696 (776)
T ss_dssp             SHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHH
T ss_conf             663028998637889999


No 18 
>3lqb_A Hatching enzyme, LOC792177 protein; hydrolase, metalloprotease, astacin, metal- protease; 1.10A {Danio rerio}
Probab=93.27  E-value=0.083  Score=29.30  Aligned_cols=17  Identities=24%  Similarity=0.147  Sum_probs=13.6

Q ss_pred             HHHHHHHHHHHHHHHHHH
Q ss_conf             679999998458999996
Q gi|254780915|r  409 QDVMTLAHELGHGIHFVL  426 (626)
Q Consensus       409 ~dv~TL~HE~GHa~H~~l  426 (626)
                      ..+.|..||+|||| |++
T Consensus        92 ~~~gti~HEl~HAl-Gf~  108 (199)
T 3lqb_A           92 VYSGIAQHELNHAL-GFY  108 (199)
T ss_dssp             CSHHHHHHHHHHHH-TCC
T ss_pred             CCCCHHHHHHHHHH-CCC
T ss_conf             87544899999985-688


No 19 
>1atl_A Atrolysin C; metalloendopeptidase; HET: MTJ; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 2aig_P* 3aig_A* 4aig_A* 1iag_A
Probab=93.05  E-value=0.18  Score=26.95  Aligned_cols=41  Identities=22%  Similarity=0.110  Sum_probs=22.9

Q ss_pred             CCCCC-CCCCCCCCCCCCEEECCC--CCCHHHHHHHHHHHHHHH
Q ss_conf             99874-354766677751010365--332467999999845899
Q gi|254780915|r  382 GKGSG-AFAHGTIPSVHPYILLNY--LGKPQDVMTLAHELGHGI  422 (626)
Q Consensus       382 gKr~G-A~~~~~~~~~~~~I~~N~--~~~~~dv~TL~HE~GHa~  422 (626)
                      +...| ||-.+++.......+...  ..++....|++||+||.+
T Consensus       105 ~~~~G~A~~ggiC~~~~~~~~~~~~~~~~~~~a~v~AHElGH~l  148 (202)
T 1atl_A          105 EETLGLAPLGTMCDPKLSIGIVQDHSPINLLMGVTMAHELGHNL  148 (202)
T ss_dssp             SSCCEECCTTCTTCTTTSEEEEECCCSCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHC
T ss_conf             98556640588778674763786069841789999999987653


No 20 
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=92.99  E-value=0.066  Score=30.04  Aligned_cols=40  Identities=25%  Similarity=0.158  Sum_probs=24.4

Q ss_pred             CCCCCCCCCCCCCCCCEEECCCC--CCHHHHHHHHHHHHHHH
Q ss_conf             98743547666777510103653--32467999999845899
Q gi|254780915|r  383 KGSGAFAHGTIPSVHPYILLNYL--GKPQDVMTLAHELGHGI  422 (626)
Q Consensus       383 Kr~GA~~~~~~~~~~~~I~~N~~--~~~~dv~TL~HE~GHa~  422 (626)
                      ..|-||..+++.......+..+.  .+...+.|++||+||.+
T Consensus       106 ~~G~A~~g~~C~~~~~~~v~~~~~~~~~~~~~viAHElGH~l  147 (197)
T 1qua_A          106 TVGLAYLKTMCNSKYSVGLIQDHSAIPLLMAVTMAHELGHNL  147 (197)
T ss_dssp             CSEEECTTCTTCTTTCEEEEECCCSCHHHHHHHHHHHHHHHT
T ss_pred             EEEEECCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHC
T ss_conf             368760477377887634675078851578999999988653


No 21 
>3edh_A Bone morphogenetic protein 1; vicinal disulfide, alternative splicing, calcium, chondrogenesis, cleavage on PAIR of basic residues, cytokine; 1.25A {Homo sapiens} PDB: 3edg_A 3edi_A
Probab=92.79  E-value=0.17  Score=27.13  Aligned_cols=39  Identities=13%  Similarity=-0.016  Sum_probs=21.1

Q ss_pred             CCCCCCCCCC-CCEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             3547666777-510103653324679999998458999996
Q gi|254780915|r  387 AFAHGTIPSV-HPYILLNYLGKPQDVMTLAHELGHGIHFVL  426 (626)
Q Consensus       387 A~~~~~~~~~-~~~I~~N~~~~~~dv~TL~HE~GHa~H~~l  426 (626)
                      ..|++.+... ...-.++....-..+.|..||+|||| |+.
T Consensus        63 ~GC~S~vG~~~g~~q~~sl~~~c~~~g~i~HEl~HaL-Gf~  102 (201)
T 3edh_A           63 CGCCSYVGRRGGGPQAISIGKNCDKFGIVVHELGHVV-GFW  102 (201)
T ss_dssp             SCSCCCSSCCCSSEEEEEECGGGCSHHHHHHHHHHHH-TBC
T ss_pred             CCEEEECCEECCCEEEEECCCCCCCCCCHHHHHHHHH-CCC
T ss_conf             9647763076684478726888576660388888875-463


No 22 
>3lq0_A Proastacin; metallopeptidase, zymogen activation, proenzyme, protease, Z disulfide bond, hydrolase, metal-binding, metalloprotease,; 1.45A {Astacus astacus} PDB: 1iab_A 1iaa_A 1ast_A 1iac_A 1iad_A 1iae_A 1qji_A* 1qjj_A
Probab=91.86  E-value=0.069  Score=29.91  Aligned_cols=39  Identities=18%  Similarity=0.044  Sum_probs=20.3

Q ss_pred             CCCCCCCCCCC--CCEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             43547666777--510103653324679999998458999996
Q gi|254780915|r  386 GAFAHGTIPSV--HPYILLNYLGKPQDVMTLAHELGHGIHFVL  426 (626)
Q Consensus       386 GA~~~~~~~~~--~~~I~~N~~~~~~dv~TL~HE~GHa~H~~l  426 (626)
                      |..|++.+...  ...|.+.-. .-..+.|..||+|||+ |+.
T Consensus        95 ~~GC~S~VG~~gg~Q~vsl~~~-gC~~~g~i~HEl~HaL-Gf~  135 (235)
T 3lq0_A           95 GSGCWSYVGRISGAQQVSLQAN-GCVYHGTILHALMHAI-GFY  135 (235)
T ss_dssp             SSSEEEESSCCSSEEEEEECTT-TTCSHHHHHHHHHHHH-HBC
T ss_pred             CCCCCEECCCCCCCEEEEECCC-CCCCCCHHHHHHHHHH-CCC
T ss_conf             9975762550188145882799-8677557999999985-685


No 23 
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, alternative splicing, cell adhesion, cleavage on PAIR of basic residues, EGF-like domain; HET: NAG; 2.36A {Homo sapiens}
Probab=91.64  E-value=0.13  Score=27.91  Aligned_cols=38  Identities=21%  Similarity=0.201  Sum_probs=24.0

Q ss_pred             CCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             74354766677751010365332467999999845899
Q gi|254780915|r  385 SGAFAHGTIPSVHPYILLNYLGKPQDVMTLAHELGHGI  422 (626)
Q Consensus       385 ~GA~~~~~~~~~~~~I~~N~~~~~~dv~TL~HE~GHa~  422 (626)
                      |=||.-++........+..+.+..-.+.|++||+||.+
T Consensus       109 G~A~~g~~C~~~~~~~i~~~~~~~~~~~~~AHElgH~l  146 (510)
T 3g5c_A          109 GAAYIGGICSLLKGGGVNEFGKTDLMAVTLAQSLAHNI  146 (510)
T ss_dssp             EEECTTCTTCTTTSEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCCEEEEECCCCCEEEEEEEEECCEEE
T ss_conf             51103665667788799974886256788764033351


No 24 
>1c7k_A NCNP, zinc endoprotease; alpha and beta protein, metalloproteinase, hydrolase; 1.00A {Streptomyces caespitosus} SCOP: d.92.1.1 PDB: 1kuh_A
Probab=91.60  E-value=0.066  Score=30.01  Aligned_cols=29  Identities=31%  Similarity=0.438  Sum_probs=19.5

Q ss_pred             CCCCCEEECCCCCC--HHHHHHHHHHHHHHH
Q ss_conf             77751010365332--467999999845899
Q gi|254780915|r  394 PSVHPYILLNYLGK--PQDVMTLAHELGHGI  422 (626)
Q Consensus       394 ~~~~~~I~~N~~~~--~~dv~TL~HE~GHa~  422 (626)
                      ......|..|....  .+-..|..||+||||
T Consensus        59 ~~~~~~i~ln~~~~~~~~~~~va~HElGHAL   89 (132)
T 1c7k_A           59 GHGRGYIFLDYQQNQQYDSTRVTAHETGHVL   89 (132)
T ss_dssp             SSSCEEEEEEHHHHHHSCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCCCCCEEEEEEEECCCC
T ss_conf             8875069967634446560035434301011


No 25 
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=91.31  E-value=0.12  Score=28.29  Aligned_cols=36  Identities=19%  Similarity=0.229  Sum_probs=21.3

Q ss_pred             CCCCCCCCCCCCEEECC--CCCCHHHHHHHHHHHHHHH
Q ss_conf             35476667775101036--5332467999999845899
Q gi|254780915|r  387 AFAHGTIPSVHPYILLN--YLGKPQDVMTLAHELGHGI  422 (626)
Q Consensus       387 A~~~~~~~~~~~~I~~N--~~~~~~dv~TL~HE~GHa~  422 (626)
                      ||-.+.+.......+..  ....+..+.|++||+||.+
T Consensus       113 A~~g~iC~~~~~~~v~~~~~~~~~~~~~~~AHElGH~l  150 (203)
T 1kuf_A          113 AYVGRMCDEKYSVAVVKDHSSKVFMVAVTMTHELGHNL  150 (203)
T ss_dssp             ECTTCTTCTTTSEEEEECCCSCHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHC
T ss_conf             25688788877502783278624799999999987534


No 26 
>3k7l_A Atragin; SVMP, metalloprotease, hydrolase; HET: NAG; 2.50A {Naja atra}
Probab=90.76  E-value=0.19  Score=26.71  Aligned_cols=39  Identities=21%  Similarity=0.331  Sum_probs=22.0

Q ss_pred             CCC-CCCCCCCCCCCCEEECCCCC--CHHHHHHHHHHHHHHH
Q ss_conf             874-35476667775101036533--2467999999845899
Q gi|254780915|r  384 GSG-AFAHGTIPSVHPYILLNYLG--KPQDVMTLAHELGHGI  422 (626)
Q Consensus       384 r~G-A~~~~~~~~~~~~I~~N~~~--~~~dv~TL~HE~GHa~  422 (626)
                      ..| ||-.+.........+....+  ++-...|++||+||.+
T Consensus       115 ~~GlA~~g~~C~~~~~~~i~~~~~~~~~~~~~v~AHElGH~l  156 (422)
T 3k7l_A          115 PVGLAYIGSICNPKTSAAVVQDYSSRTRMVAITMAHEMGHNL  156 (422)
T ss_dssp             CSEEECSSCTTCTTTCCEEEECCCSCHHHHHHHHHHHHHHHT
T ss_pred             CEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf             055134467657887779984178763025999999875013


No 27 
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=90.09  E-value=0.17  Score=27.09  Aligned_cols=36  Identities=28%  Similarity=0.385  Sum_probs=20.8

Q ss_pred             CCCCCCCCCCCCEEECCCC--CCHHHHHHHHHHHHHHH
Q ss_conf             3547666777510103653--32467999999845899
Q gi|254780915|r  387 AFAHGTIPSVHPYILLNYL--GKPQDVMTLAHELGHGI  422 (626)
Q Consensus       387 A~~~~~~~~~~~~I~~N~~--~~~~dv~TL~HE~GHa~  422 (626)
                      ||-.+++.......+....  .....+.|++||+||.+
T Consensus       111 A~~ggiC~~~~~~~v~~~~~~~~~~~a~~iAHElGH~l  148 (202)
T 2w15_A          111 AYTGGMCDPRHSVGVVRDHSKNNLWVAVTMAHELGHNL  148 (202)
T ss_dssp             ECTTCTTCTTTSEEEEECCCSSHHHHHHHHHHHHHHHT
T ss_pred             ECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHC
T ss_conf             43466456887624774368760488999999999873


No 28 
>3b8z_A Protein adamts-5; alpha/beta, hydrolase; HET: 294; 1.40A {Homo sapiens} PDB: 3hyg_A* 3hy9_A* 3hy7_A* 3ljt_A*
Probab=90.08  E-value=0.15  Score=27.58  Aligned_cols=39  Identities=18%  Similarity=0.020  Sum_probs=22.6

Q ss_pred             CCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             9874354766677751010365332467999999845899
Q gi|254780915|r  383 KGSGAFAHGTIPSVHPYILLNYLGKPQDVMTLAHELGHGI  422 (626)
Q Consensus       383 Kr~GA~~~~~~~~~~~~I~~N~~~~~~dv~TL~HE~GHa~  422 (626)
                      ..|-||-.+++. ...-+..+.......+.|++||+||.+
T Consensus       115 ~~G~A~~g~iC~-~~~~~~~~~~~~~~~~~v~AHElGH~l  153 (217)
T 3b8z_A          115 TLGMADVGTICS-PERSCAVIEDDGLHAAFTVAHEIGHLL  153 (217)
T ss_dssp             CCEEECSSCTTC-GGGCEEEEECCSSSHHHHHHHHHHHHT
T ss_pred             CCEEEECCCCCC-CCCCEEEEECCCCHHHHHHHHHHHHHC
T ss_conf             514760575445-887468982477124788999876112


No 29 
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrolase; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 1ciz_A* 1caq_A* ...
Probab=89.72  E-value=0.11  Score=28.44  Aligned_cols=15  Identities=33%  Similarity=0.647  Sum_probs=12.1

Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             467999999845899
Q gi|254780915|r  408 PQDVMTLAHELGHGI  422 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~  422 (626)
                      .+-..|+.||+||||
T Consensus       111 ~~~~~v~~HEiGHAL  125 (173)
T 1hy7_A          111 TNLFLVAAHEIGHSL  125 (173)
T ss_dssp             EEHHHHHHHHHHHHH
T ss_pred             CCHHHEEHHHHCCCC
T ss_conf             213210023323213


No 30 
>1qib_A Protein (gelatinase A); inhibitor, matrixin, matrix metalloproteinase-2 (MMP-2), metzincin, hydrolase; 2.80A {Homo sapiens} SCOP: d.92.1.11 PDB: 1hov_A*
Probab=89.50  E-value=0.13  Score=28.01  Aligned_cols=16  Identities=31%  Similarity=0.480  Sum_probs=12.6

Q ss_pred             HHHHHHHHHHHHHHHH
Q ss_conf             4679999998458999
Q gi|254780915|r  408 PQDVMTLAHELGHGIH  423 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~H  423 (626)
                      .+-..|+.||+||||=
T Consensus       107 ~~~~~~~~HEiGHaLG  122 (161)
T 1qib_A          107 YSLFLVAAHEFGHAMG  122 (161)
T ss_dssp             EEHHHHHHHHHHHHHT
T ss_pred             CCEEEEEEEECCCCCC
T ss_conf             3213553121042347


No 31 
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=89.33  E-value=0.22  Score=26.28  Aligned_cols=36  Identities=22%  Similarity=0.194  Sum_probs=21.1

Q ss_pred             CCCCCCCCCCCCEEECCCCC--CHHHHHHHHHHHHHHH
Q ss_conf             35476667775101036533--2467999999845899
Q gi|254780915|r  387 AFAHGTIPSVHPYILLNYLG--KPQDVMTLAHELGHGI  422 (626)
Q Consensus       387 A~~~~~~~~~~~~I~~N~~~--~~~dv~TL~HE~GHa~  422 (626)
                      ||-.+++.......+..+.+  .+..+.|++||+||.+
T Consensus       111 A~~ggiC~~~~~~~v~~~~~~~~~~~a~v~AHElGH~l  148 (214)
T 1r55_A          111 APVEGMCRAESSGGVSTDHSELPIGAAATMAHEIGHSL  148 (214)
T ss_dssp             CCTTCTTCTTTCEEEEECCSSSHHHHHHHHHHHHHHHT
T ss_pred             EECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHC
T ss_conf             71277578887458995488743688999999988763


No 32 
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=89.21  E-value=0.14  Score=27.77  Aligned_cols=13  Identities=38%  Similarity=0.593  Sum_probs=11.5

Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             7999999845899
Q gi|254780915|r  410 DVMTLAHELGHGI  422 (626)
Q Consensus       410 dv~TL~HE~GHa~  422 (626)
                      -..|+.||+||||
T Consensus       115 ~~~~~~HEiGHaL  127 (167)
T 2xs4_A          115 LITVAAHEIGHLL  127 (167)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
T ss_conf             6677787765551


No 33 
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=89.07  E-value=0.1  Score=28.62  Aligned_cols=13  Identities=38%  Similarity=0.557  Sum_probs=11.1

Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             7999999845899
Q gi|254780915|r  410 DVMTLAHELGHGI  422 (626)
Q Consensus       410 dv~TL~HE~GHa~  422 (626)
                      =..|+.||+||||
T Consensus       113 ~~~~~~HEiGHaL  125 (165)
T 1hv5_A          113 LLQVAAHEFGHVL  125 (165)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHC
T ss_conf             6332234420120


No 34 
>2v4b_A Adamts-1; zinc, zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, polymorphism, glycoprotein; 2.00A {Homo sapiens} PDB: 2jih_A
Probab=89.07  E-value=0.26  Score=25.78  Aligned_cols=40  Identities=23%  Similarity=0.095  Sum_probs=24.5

Q ss_pred             CCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             743547666777510103653324679999998458999996
Q gi|254780915|r  385 SGAFAHGTIPSVHPYILLNYLGKPQDVMTLAHELGHGIHFVL  426 (626)
Q Consensus       385 ~GA~~~~~~~~~~~~I~~N~~~~~~dv~TL~HE~GHa~H~~l  426 (626)
                      |-||..++........+. -..++..+.|++||+||.+ ++-
T Consensus       119 G~A~~ggiCs~~~s~~i~-~~~~~~~~~~~AHElGH~l-G~~  158 (300)
T 2v4b_A          119 GMADVGTVCDPSRSCSVI-EDDGLQAAFTTAHELGHVF-NMP  158 (300)
T ss_dssp             EEECTTCTTCTTTCEEEE-ECSSTTHHHHHHHHHHHHT-TCC
T ss_pred             EEECCCCCCCCCCCEEEE-CCCCCHHHHHHHHHHHHHC-CCC
T ss_conf             050536788788788786-5788118888887763017-873


No 35 
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=89.01  E-value=0.28  Score=25.50  Aligned_cols=37  Identities=19%  Similarity=0.221  Sum_probs=20.7

Q ss_pred             CCCCCCCCCCCCCEEECCCCC--CHHHHHHHHHHHHHHH
Q ss_conf             435476667775101036533--2467999999845899
Q gi|254780915|r  386 GAFAHGTIPSVHPYILLNYLG--KPQDVMTLAHELGHGI  422 (626)
Q Consensus       386 GA~~~~~~~~~~~~I~~N~~~--~~~dv~TL~HE~GHa~  422 (626)
                      -||-.+++.......+....+  ....+.|++||+||.+
T Consensus       107 ~A~~g~iC~~~~~~~~~~~~~~~~~~~a~~~AHElGH~l  145 (197)
T 1bud_A          107 LAYVASMCNPKRSVGVIQDHSSVNRLVAITLAHEMAHNL  145 (197)
T ss_dssp             EECSSCTTCTTTSEEEEECCCSSHHHHHHHHHHHHHHHT
T ss_pred             EEEECCCCCCCCCCCEEECCCCCCHHEEHHHHHHHHHHC
T ss_conf             220256247877652564378861001001678878654


No 36 
>1i76_A MMP-8;, neutrophil collagenase; hydrolase, complex (metalloprotease/inhibitor); HET: BSI; 1.20A {Homo sapiens} SCOP: d.92.1.11 PDB: 1i73_A* 1jao_A* 1jap_A 1jaq_A* 1jj9_A* 1mmb_A* 1zp5_A* 1zs0_A* 1zvx_A* 3dng_A* 3dpe_A* 3dpf_A* 1kbc_A* 1jan_A* 1bzs_A* 1mnc_A* 2oy2_A 1a86_A* 1jh1_A* 1a85_A ...
Probab=88.98  E-value=0.16  Score=27.26  Aligned_cols=15  Identities=33%  Similarity=0.558  Sum_probs=12.4

Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             467999999845899
Q gi|254780915|r  408 PQDVMTLAHELGHGI  422 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~  422 (626)
                      .+-..|+.||+||||
T Consensus       110 ~~~~~v~~HEIGHaL  124 (163)
T 1i76_A          110 YNLFLVAAHEFGHSL  124 (163)
T ss_dssp             CBHHHHHHHHHHHHH
T ss_pred             CEEEEEEEEECCCEE
T ss_conf             325788632001100


No 37 
>2e3x_A Coagulation factor X-activating enzyme heavy chain; disintegrin, metalloproteinase, C-type lectin, hydrolase, blood clotting; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=88.92  E-value=0.48  Score=23.87  Aligned_cols=41  Identities=20%  Similarity=0.275  Sum_probs=22.4

Q ss_pred             CCCCCCCCCCCCCCEEECCCCC--CHHHHHHHHHHHHHHHHHHH
Q ss_conf             7435476667775101036533--24679999998458999996
Q gi|254780915|r  385 SGAFAHGTIPSVHPYILLNYLG--KPQDVMTLAHELGHGIHFVL  426 (626)
Q Consensus       385 ~GA~~~~~~~~~~~~I~~N~~~--~~~dv~TL~HE~GHa~H~~l  426 (626)
                      |=||-.++........+..+.+  .+.-..|++||+||.+ +|-
T Consensus       112 GlA~vggiC~~~~s~~v~~~~~~~~l~~a~~iAHElGHnl-G~~  154 (427)
T 2e3x_A          112 GITFLAGMCQAYRSVGIVQEQGNRNFKTAVIMAHELSHNL-GMY  154 (427)
T ss_dssp             EEECTTCTTCTTTSEEEEECCTTCHHHHHHHHHHHHHHTT-TCC
T ss_pred             EEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHC-CCC
T ss_conf             6630577667787457883267515788999999988745-985


No 38 
>3bon_A Neurotoxin A; metalloprotease; 1.20A {Clostridium botulinum} SCOP: d.92.1.7 PDB: 3bok_A 3boo_A 2ilp_A* 2ima_A* 2imb_A* 2imc_A 2w2d_A 3c8b_A 3bwi_A 3c88_A 3c89_A 3c8a_A 3dda_A 3ddb_A 3nf3_A 2isg_A 2ise_A 2ish_A 1xtg_A 1xtf_A ...
Probab=88.80  E-value=0.91  Score=21.90  Aligned_cols=61  Identities=21%  Similarity=0.176  Sum_probs=40.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
Q ss_conf             4679999998458999996125687----765780059998868889999999984138998999
Q gi|254780915|r  408 PQDVMTLAHELGHGIHFVLSSETQG----ILTNNSSLTLAETASIFGETLTFDSLLQAASSKEER  468 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~H~~ls~~~~~----~~~~~~~~~~aE~~S~~~E~~~~~~~~~~~~~~~~~  468 (626)
                      .|=+.+|.||+=|++|+++.-+..+    ...++....+++.+=++-|.+.+--..-+.++....
T Consensus       215 ~DPAl~LmheLIhsLh~LYGik~~~~~~~~~~~~~~~~~~~~~i~~eEl~tFGG~D~~~I~~~~~  279 (425)
T 3bon_A          215 TDPAVTLAHELIHAGHRLYGIAINPNRVFKVNTNAYYEMSGLEVSFEELRTFGGHDAKFIDSLQE  279 (425)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCCCCTTCEEECCSCHHHHHTTCEEEHHHHHHHCHHHHTTSCHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHH
T ss_conf             28899999999999887506115887644433211344325775577775407978100480377


No 39 
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=88.80  E-value=0.14  Score=27.68  Aligned_cols=15  Identities=33%  Similarity=0.607  Sum_probs=12.6

Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             467999999845899
Q gi|254780915|r  408 PQDVMTLAHELGHGI  422 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~  422 (626)
                      .+-..|+.||+||||
T Consensus       115 ~~~~~v~~HEiGHaL  129 (169)
T 1rm8_A          115 NDLFLVAVHELGHAL  129 (169)
T ss_dssp             EEHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHH
T ss_conf             217677777777651


No 40 
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=88.78  E-value=0.14  Score=27.67  Aligned_cols=13  Identities=38%  Similarity=0.621  Sum_probs=11.1

Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             7999999845899
Q gi|254780915|r  410 DVMTLAHELGHGI  422 (626)
Q Consensus       410 dv~TL~HE~GHa~  422 (626)
                      -..|+.||+||||
T Consensus       108 ~~~v~~HEiGHaL  120 (160)
T 2jsd_A          108 LFTVAAHEFGHAL  120 (160)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             EEEEEEEECCCCC
T ss_conf             4677611001100


No 41 
>3dte_A IRRE protein; radiotolerance, gene regulation, metallopeptidase; 2.60A {Deinococcus deserti} PDB: 3dti_A 3dtk_A
Probab=88.76  E-value=0.35  Score=24.87  Aligned_cols=37  Identities=38%  Similarity=0.619  Sum_probs=24.4

Q ss_pred             CCCCCCCCCCCCCCCCCEEECCCCC-CHHHHHHHHHHHHHHHH
Q ss_conf             9987435476667775101036533-24679999998458999
Q gi|254780915|r  382 GKGSGAFAHGTIPSVHPYILLNYLG-KPQDVMTLAHELGHGIH  423 (626)
Q Consensus       382 gKr~GA~~~~~~~~~~~~I~~N~~~-~~~dv~TL~HE~GHa~H  423 (626)
                      |...|+|-    + ..+.|+.|-+. ..+--+|++||+||.+-
T Consensus        72 ~~~~g~~d----~-~~~~IlIN~~~~~~R~rFTlAHELgH~~L  109 (301)
T 3dte_A           72 GQRDGAYD----P-EHHVILINSQVRPERQRFTLAHEISHALL  109 (301)
T ss_dssp             TTCCEEEE----T-TTTEEEEETTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEC----C-CCCEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf             65453265----8-99989984899978859999999999996


No 42 
>3ma2_D Matrix metalloproteinase-14; protein - protein complex, cleavage on PAIR of basic residue disulfide bond, membrane, metal-binding; 2.05A {Homo sapiens} PDB: 1bqq_M 1buv_M
Probab=88.65  E-value=0.12  Score=28.29  Aligned_cols=15  Identities=33%  Similarity=0.612  Sum_probs=12.4

Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             467999999845899
Q gi|254780915|r  408 PQDVMTLAHELGHGI  422 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~  422 (626)
                      .+-..|+.||+||||
T Consensus       120 ~~~~~v~~HEiGHaL  134 (181)
T 3ma2_D          120 NDIFLVAVHELGHAL  134 (181)
T ss_dssp             EEHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHC
T ss_conf             218888887766541


No 43 
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra}
Probab=88.57  E-value=0.3  Score=25.38  Aligned_cols=39  Identities=18%  Similarity=0.279  Sum_probs=21.9

Q ss_pred             CCCCCCCCCCCCEEECCCCC-C-HHHHHHHHHHHHHHHHHHH
Q ss_conf             35476667775101036533-2-4679999998458999996
Q gi|254780915|r  387 AFAHGTIPSVHPYILLNYLG-K-PQDVMTLAHELGHGIHFVL  426 (626)
Q Consensus       387 A~~~~~~~~~~~~I~~N~~~-~-~~dv~TL~HE~GHa~H~~l  426 (626)
                      ||-.++.......++....+ . ...+.|++||+||.+ ++.
T Consensus       114 A~vg~iCs~~~s~~~~~d~g~~~~~~a~~iAHElGH~l-G~~  154 (397)
T 3k7n_A          114 AYIGSLCKTNESVAIVQDYNRRISLVASTITHELGHNL-GIH  154 (397)
T ss_dssp             ECSSCTTCTTTCEEEEECCCSCHHHHHHHHHHHHHHHT-TCC
T ss_pred             EECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHC-CCC
T ss_conf             52376245887523663068633489999999976331-787


No 44 
>1mmq_A Matrilysin; metalloprotease; HET: RRS; 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 1mmp_A* 1mmr_A* 2ddy_A*
Probab=88.18  E-value=0.16  Score=27.21  Aligned_cols=15  Identities=33%  Similarity=0.547  Sum_probs=12.0

Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             467999999845899
Q gi|254780915|r  408 PQDVMTLAHELGHGI  422 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~  422 (626)
                      .+-..|+.||+||||
T Consensus       112 ~~~~~v~~HEiGHaL  126 (170)
T 1mmq_A          112 INFLYAATHELGHSL  126 (170)
T ss_dssp             EEHHHHHHHHHHHHH
T ss_pred             CCHHHEEEHHCCCCC
T ss_conf             114111201112334


No 45 
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=88.04  E-value=0.31  Score=25.21  Aligned_cols=39  Identities=23%  Similarity=0.192  Sum_probs=21.7

Q ss_pred             CCCCCCCCCCCCEEECCC--CCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             354766677751010365--3324679999998458999996
Q gi|254780915|r  387 AFAHGTIPSVHPYILLNY--LGKPQDVMTLAHELGHGIHFVL  426 (626)
Q Consensus       387 A~~~~~~~~~~~~I~~N~--~~~~~dv~TL~HE~GHa~H~~l  426 (626)
                      ||..+++...-...+..+  ...+.-+.|++||+||.+ |+-
T Consensus       110 A~~g~iC~~~~~~~v~~~~~~~~~~~a~viAHElGH~l-G~~  150 (202)
T 1yp1_A          110 AFVGTMCNAKYSAGIIQDFSAIPLLMAVVMAHELGHNL-GML  150 (202)
T ss_dssp             ECTTCTTCTTTCEEEEECCCSCHHHHHHHHHHHHHHHT-TCC
T ss_pred             ECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHC-CCC
T ss_conf             22588636686632577258861356788899877217-987


No 46 
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A*
Probab=88.02  E-value=0.16  Score=27.26  Aligned_cols=15  Identities=40%  Similarity=0.457  Sum_probs=12.3

Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             467999999845899
Q gi|254780915|r  408 PQDVMTLAHELGHGI  422 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~  422 (626)
                      .+-..|+.||+||||
T Consensus       109 ~~~~~v~~HEiGHaL  123 (168)
T 1cge_A          109 YNLHRVAAHELGHSL  123 (168)
T ss_dssp             CBHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHC
T ss_conf             257888987651111


No 47 
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase-inhibitor), acetohydroxamic acid, hydrolase; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* 3f1a_A* 3lka_A* 2wo9_A* 2wo8_A* ...
Probab=87.99  E-value=0.15  Score=27.56  Aligned_cols=14  Identities=36%  Similarity=0.695  Sum_probs=11.7

Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             67999999845899
Q gi|254780915|r  409 QDVMTLAHELGHGI  422 (626)
Q Consensus       409 ~dv~TL~HE~GHa~  422 (626)
                      +-..|+.||+||||
T Consensus       107 ~~~~v~~HEiGHaL  120 (159)
T 1y93_A          107 NLFLTAVHEIGHSL  120 (159)
T ss_dssp             EHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHH
T ss_conf             26555477665540


No 48 
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP- 9) (92 kDa type IV collagenase) (92...; hydrolase, S1-prime pocket; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=87.91  E-value=0.15  Score=27.51  Aligned_cols=14  Identities=29%  Similarity=0.617  Sum_probs=11.7

Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             67999999845899
Q gi|254780915|r  409 QDVMTLAHELGHGI  422 (626)
Q Consensus       409 ~dv~TL~HE~GHa~  422 (626)
                      +-..|+.||+||||
T Consensus       110 ~~~~v~~HEiGHaL  123 (159)
T 2ovx_A          110 SLFLVAAHQFGHAL  123 (159)
T ss_dssp             EHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHCCCCC
T ss_conf             13344545504200


No 49 
>2a97_A BONT/F, botulinum neurotoxin type F, bontoxilysin F; clostridium botulinum neurotoxin serotype F, light chain, catalytic domain, X-RAY,; 1.80A {Clostridium botulinum} PDB: 2a8a_A 3fie_A 3fii_A
Probab=87.88  E-value=1.1  Score=21.43  Aligned_cols=70  Identities=21%  Similarity=0.254  Sum_probs=40.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             467999999845899999612568776----5780059998868889999999984138998999999999862
Q gi|254780915|r  408 PQDVMTLAHELGHGIHFVLSSETQGIL----TNNSSLTLAETASIFGETLTFDSLLQAASSKEERKILLANKIE  477 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~H~~ls~~~~~~~----~~~~~~~~aE~~S~~~E~~~~~~~~~~~~~~~~~~~ll~~~~~  477 (626)
                      .|=+.+|.||+=||+|+++.-+.-|.-    ....+...++-+=++-|.+.+--..-+.++...+..+....+.
T Consensus       219 ~DPAl~LmheLIh~Lh~LYGik~i~~~~~~~~~~~~~~~~~~~i~~eE~ltfGG~D~~~I~~~~~~~~~~k~l~  292 (439)
T 2a97_A          219 ADPAISLAHELIHALHGLYGARGVTYEETIEVKQAPLMIAEKPIRLEEFLTFGGQDLNIITSAMKEKIYNNLLA  292 (439)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCCTTTTTCBC------------CCBHHHHHHHCGGGGGGSCHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             28899999999999887517213685310033420110035776623345327878210580357899999999


No 50 
>1zb7_A Neurotoxin; hexxh metalloprotease; HET: FLC; 2.35A {Clostridium botulinum}
Probab=87.77  E-value=0.36  Score=24.76  Aligned_cols=64  Identities=17%  Similarity=0.115  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf             4679999998458999996125687---765780059998868889999999984138998999999
Q gi|254780915|r  408 PQDVMTLAHELGHGIHFVLSSETQG---ILTNNSSLTLAETASIFGETLTFDSLLQAASSKEERKIL  471 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~H~~ls~~~~~---~~~~~~~~~~aE~~S~~~E~~~~~~~~~~~~~~~~~~~l  471 (626)
                      .|=+.+|.||+=|++|+++.-+...   ..+..-+-..++.++++.|.+.+--..-+.++......+
T Consensus       222 ~DPAl~LmheLIhsLh~LYGiki~~~~~ip~~~~~~~~~~~~i~~eE~ltfGG~D~~~I~~~~~~~~  288 (455)
T 1zb7_A          222 ADPALTLMHELIHVLHGLYGIKISNLPITPNTKEFFMQHSDPVQAEELYTFGGHDPSVISPSTDMNI  288 (455)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCCCCCCCBCC-----CCCBCCSSCHHHHHHHHSCCTTTSCHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf             3889999999999988650515688534320004766445655588998616978100685778899


No 51 
>1g9k_A Serralysin; beta jelly roll, hydrolase; 1.96A {Pseudomonas} SCOP: b.80.7.1 d.92.1.6 PDB: 1o0q_A 1o0t_A 1om6_A 1om7_A 1om8_A 1omj_A 1h71_P
Probab=87.40  E-value=0.42  Score=24.31  Aligned_cols=13  Identities=46%  Similarity=0.792  Sum_probs=11.5

Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             7999999845899
Q gi|254780915|r  410 DVMTLAHELGHGI  422 (626)
Q Consensus       410 dv~TL~HE~GHa~  422 (626)
                      ...|+.||+|||+
T Consensus       163 ~~~t~lHEIGHAL  175 (463)
T 1g9k_A          163 GRQTLTHEIGHTL  175 (463)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             CEEEEEEHHHHHH
T ss_conf             1245200111120


No 52 
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, MDC protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=87.33  E-value=0.36  Score=24.78  Aligned_cols=37  Identities=16%  Similarity=0.297  Sum_probs=20.6

Q ss_pred             CCCCCCCCCCCCEEECCCCC--CHHHHHHHHHHHHHHHH
Q ss_conf             35476667775101036533--24679999998458999
Q gi|254780915|r  387 AFAHGTIPSVHPYILLNYLG--KPQDVMTLAHELGHGIH  423 (626)
Q Consensus       387 A~~~~~~~~~~~~I~~N~~~--~~~dv~TL~HE~GHa~H  423 (626)
                      ||-.++........+....+  .+.-..|++||+||.+-
T Consensus       121 A~~ggiC~~~~s~~v~~~~~~~~~~~a~~~AHElGHnlG  159 (427)
T 2ero_A          121 GYLGGICNTMYSAGIVQDHSKIHHLVAIAMAHEMGHNLG  159 (427)
T ss_dssp             ECTTCTTCTTTCEEEEECCBSSHHHHHHHHHHHHHHHTT
T ss_pred             EEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC
T ss_conf             013432257763446643787306999999999998648


No 53 
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A*
Probab=86.85  E-value=0.46  Score=23.99  Aligned_cols=42  Identities=19%  Similarity=0.202  Sum_probs=23.9

Q ss_pred             CCCCCCCCCCCCCCCE-EECCCC-CCHHHHHHHHHHHHHHHHHHH
Q ss_conf             8743547666777510-103653-324679999998458999996
Q gi|254780915|r  384 GSGAFAHGTIPSVHPY-ILLNYL-GKPQDVMTLAHELGHGIHFVL  426 (626)
Q Consensus       384 r~GA~~~~~~~~~~~~-I~~N~~-~~~~dv~TL~HE~GHa~H~~l  426 (626)
                      .|=||..++....... |...+. ..+....|++||+||.+ +|-
T Consensus       109 ~GlA~~g~~C~~~~s~~v~~~~~~~~~~~a~v~AHElGHnl-G~~  152 (419)
T 2dw0_A          109 IGLAYVGSMCHPKRSTGIIQDYSEINLVVAVIMAHEMGHNL-GIN  152 (419)
T ss_dssp             SEEECSSCTTCTTTSEEEEECCCSCHHHHHHHHHHHHHHHT-TCC
T ss_pred             CEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHC-CCC
T ss_conf             36760276457876510584035552366899999888652-874


No 54 
>830c_A MMP-13, MMP-13; matrix metalloprotease; HET: RS1; 1.60A {Homo sapiens} SCOP: d.92.1.11 PDB: 456c_A* 1you_A* 1eub_A* 1xuc_A* 1xud_A* 1xur_A* 3elm_A* 3i7g_A* 3i7i_A* 2ow9_A* 2ozr_A* 2d1n_A* 1fls_A* 1fm1_A* 1ztq_A* 2e2d_A 2pjt_A* 1cxv_A*
Probab=86.64  E-value=0.2  Score=26.59  Aligned_cols=17  Identities=29%  Similarity=0.444  Sum_probs=13.3

Q ss_pred             CHHHHHHHHHHHHHHHH
Q ss_conf             24679999998458999
Q gi|254780915|r  407 KPQDVMTLAHELGHGIH  423 (626)
Q Consensus       407 ~~~dv~TL~HE~GHa~H  423 (626)
                      ..+-..|+.||+|||+-
T Consensus       110 ~~~~~~v~~HEiGHaLG  126 (168)
T 830c_A          110 GYNLFLVAAHEFGHSLG  126 (168)
T ss_dssp             SEEHHHHHHHHHHHHTT
T ss_pred             CCEEEEEEEEECCCCCC
T ss_conf             85578886431144558


No 55 
>2rjp_A Adamts-4; metalloprotease domain, aggrecanase, cleavage on PAIR of basic residues, extracellular matrix, glycoprotein, hydrolase, metal-binding; HET: 886; 2.80A {Homo sapiens} PDB: 3b2z_A
Probab=86.37  E-value=0.46  Score=23.98  Aligned_cols=34  Identities=26%  Similarity=0.158  Sum_probs=20.5

Q ss_pred             CCCCCCCCCCC-CEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             35476667775-1010365332467999999845899
Q gi|254780915|r  387 AFAHGTIPSVH-PYILLNYLGKPQDVMTLAHELGHGI  422 (626)
Q Consensus       387 A~~~~~~~~~~-~~I~~N~~~~~~dv~TL~HE~GHa~  422 (626)
                      ||..++..... .-|.  -...+..+.|++||+||.+
T Consensus       121 A~~gg~C~~~~s~~v~--~d~~~~~a~v~AHElGH~l  155 (316)
T 2rjp_A          121 ADVGTVCDPARSCAIV--EDDGLQSAFTAAHQLGHVF  155 (316)
T ss_dssp             ECSSCTTCTTTCEEEE--ECSSTTHHHHHHHHHHHHT
T ss_pred             ECCCCCCCCCCCEEEE--CCCCCCHHHHHHHHHHHCC
T ss_conf             4247646677755587--3688307888898763014


No 56 
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=85.81  E-value=0.27  Score=25.71  Aligned_cols=14  Identities=36%  Similarity=0.695  Sum_probs=11.9

Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             67999999845899
Q gi|254780915|r  409 QDVMTLAHELGHGI  422 (626)
Q Consensus       409 ~dv~TL~HE~GHa~  422 (626)
                      +-..|+.||+||||
T Consensus       106 ~~~~v~~HEiGHaL  119 (365)
T 3ba0_A          106 NLFLTAVHEIGHSL  119 (365)
T ss_dssp             ESSHHHHHHHHHHH
T ss_pred             EEEEEEEEHHHHHC
T ss_conf             57877510132220


No 57 
>1kap_P Alkaline protease; calcium binding protein, zinc metalloprotease; 1.64A {Pseudomonas aeruginosa PAO1} SCOP: b.80.7.1 d.92.1.6 PDB: 1jiw_P 1akl_A
Probab=85.75  E-value=0.27  Score=25.68  Aligned_cols=13  Identities=46%  Similarity=0.792  Sum_probs=11.4

Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             7999999845899
Q gi|254780915|r  410 DVMTLAHELGHGI  422 (626)
Q Consensus       410 dv~TL~HE~GHa~  422 (626)
                      ...||.||+||||
T Consensus       179 ~~~tllHEIGHAL  191 (479)
T 1kap_P          179 GRQTLTHEIGHTL  191 (479)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             CHHEEHHHHHHHH
T ss_conf             2100010132440


No 58 
>3p1v_A Metallo-endopeptidase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 1.93A {Bacteroides ovatus atcc 8483}
Probab=85.69  E-value=0.45  Score=24.09  Aligned_cols=50  Identities=18%  Similarity=0.066  Sum_probs=25.7

Q ss_pred             CCCHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             5020103799874354766677751010365332467999999845899999612568
Q gi|254780915|r  374 WIDAPQYDGKGSGAFAHGTIPSVHPYILLNYLGKPQDVMTLAHELGHGIHFVLSSETQ  431 (626)
Q Consensus       374 ~iD~~~r~gKr~GA~~~~~~~~~~~~I~~N~~~~~~dv~TL~HE~GHa~H~~ls~~~~  431 (626)
                      .|=+-.+..|+||+-..+...     +..  ......-.++.|||||++ +-|++++.
T Consensus       258 ~IiVLvNs~~YGG~G~~~~~~-----~~~--a~~~~~~~V~vHElGHsf-g~LaDEY~  307 (407)
T 3p1v_A          258 HIIILANTDVYGGGGIYNSYT-----LTT--AHHPMFKPVVVHEFGHSF-GGLADEYF  307 (407)
T ss_dssp             EEEEEESCCSCCEEEETTTEE-----EEE--TTSTTHHHHHHHHHHHHT-TCCCCCCC
T ss_pred             EEEEEECCCCCCCCCCCCCCE-----EEE--CCCCCHHHHHHHHHCCCC-CCCCCEEE
T ss_conf             499998679857633258621-----761--378421457767601223-35563021


No 59 
>2ddf_A ADAM 17; hydrolase; HET: INN CIT; 1.70A {Homo sapiens} PDB: 2fv5_A* 3l0v_A* 3kme_A* 3l0t_A* 3kmc_A* 3lgp_A* 3ewj_A* 3edz_A* 3e8r_A* 2fv9_A* 1zxc_A* 2oi0_A* 3b92_A* 2a8h_A* 1bkc_A* 3cki_A 1bkc_I* 1bkc_E*
Probab=85.24  E-value=0.28  Score=25.60  Aligned_cols=19  Identities=26%  Similarity=0.349  Sum_probs=14.4

Q ss_pred             CHHHHHHHHHHHHHHHHHHH
Q ss_conf             24679999998458999996
Q gi|254780915|r  407 KPQDVMTLAHELGHGIHFVL  426 (626)
Q Consensus       407 ~~~dv~TL~HE~GHa~H~~l  426 (626)
                      ....+.|++||+||.+ ||-
T Consensus       179 ~~~~a~~~AHElGH~L-Gm~  197 (257)
T 2ddf_A          179 TKEADLVTTHELGHNF-GAE  197 (257)
T ss_dssp             HHHHHHHHHHHHHHHT-TCC
T ss_pred             HHHHHHHHHHHHHHHC-CCC
T ss_conf             5788999999988861-886


No 60 
>2rjq_A Adamts-5; metalloprotease domain, aggrecanase, cleavage on PAIR of basic residues, extracellular matrix, glycoprotein, hydrolase, metal-binding; HET: NAG BAT; 2.60A {Homo sapiens}
Probab=85.15  E-value=0.56  Score=23.41  Aligned_cols=36  Identities=19%  Similarity=0.100  Sum_probs=20.4

Q ss_pred             CCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf             4354766677751010365332467999999845899
Q gi|254780915|r  386 GAFAHGTIPSVHPYILLNYLGKPQDVMTLAHELGHGI  422 (626)
Q Consensus       386 GA~~~~~~~~~~~~I~~N~~~~~~dv~TL~HE~GHa~  422 (626)
                      -||..++......-. .+-...+..+.|++||+||.+
T Consensus       120 ~A~~gg~C~~~~s~~-i~ed~g~~~a~~~AHElGH~l  155 (378)
T 2rjq_A          120 MADVGTICSPERSCA-VIEDDGLHAAFTVAHEIGHLL  155 (378)
T ss_dssp             EECSSCTTCGGGCEE-EEECCSTTHHHHHHHHHHHHT
T ss_pred             EECCCCCCCCCCCEE-EECCCCCHHHHHHHHHHHCCC
T ss_conf             545667577887557-844788311201354450246


No 61 
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=85.06  E-value=0.26  Score=25.78  Aligned_cols=16  Identities=38%  Similarity=0.453  Sum_probs=12.8

Q ss_pred             CHHHHHHHHHHHHHHH
Q ss_conf             2467999999845899
Q gi|254780915|r  407 KPQDVMTLAHELGHGI  422 (626)
Q Consensus       407 ~~~dv~TL~HE~GHa~  422 (626)
                      ..+=..|.+||+||||
T Consensus       190 ~~~l~~Va~HEiGHaL  205 (450)
T 1su3_A          190 EYNLHRVAAHELGHSL  205 (450)
T ss_dssp             SCBHHHHHHHHHHHHT
T ss_pred             CCCEEEEEEEECCCCC
T ss_conf             7406789976224655


No 62 
>1slm_A Stromelysin-1; hydrolase, metalloprotease, fibroblast, collagen degradation; 1.90A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11
Probab=84.97  E-value=0.26  Score=25.74  Aligned_cols=21  Identities=10%  Similarity=0.151  Sum_probs=14.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHHH
Q ss_conf             777998999999998666632
Q gi|254780915|r  339 QDIIPFEVARDLVLQSYAKFS  359 (626)
Q Consensus       339 ~~~~~~ee~~~~v~~~~~~~~  359 (626)
                      .+..+.++++..|..|++.-.
T Consensus       105 ~~~l~~~~v~~~i~~Af~~Ws  125 (255)
T 1slm_A          105 TPDLPKDAVDSAVEKALKVWE  125 (255)
T ss_dssp             CTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHH
T ss_conf             999998999999999999986


No 63 
>1k7i_A PROC, secreted protease C; metalloprotease, hydrolase; 1.59A {Erwinia chrysanthemi} SCOP: b.80.7.1 d.92.1.6 PDB: 1k7g_A 1k7q_A 1go8_P 3hbv_P 3hda_P 3hbu_P 1go7_P 3hb2_P
Probab=84.09  E-value=0.36  Score=24.81  Aligned_cols=13  Identities=38%  Similarity=0.782  Sum_probs=11.3

Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             7999999845899
Q gi|254780915|r  410 DVMTLAHELGHGI  422 (626)
Q Consensus       410 dv~TL~HE~GHa~  422 (626)
                      ...|+.||+|||+
T Consensus       182 ~~~t~lHEIGHAL  194 (479)
T 1k7i_A          182 GRQTFTHEIGHAL  194 (479)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             CCEEEEEEHHHHC
T ss_conf             2103331023333


No 64 
>3c37_A Peptidase, M48 family; X-RAY, Q74D82, GSR143A, structural genomics, PSI-2, protein structure initiative; 1.70A {Geobacter sulfurreducens pca}
Probab=84.03  E-value=0.18  Score=26.90  Aligned_cols=50  Identities=20%  Similarity=0.188  Sum_probs=29.3

Q ss_pred             CHHCCCCCCCCCCCCCCCCCCCCEEE---CCCCCCHHHH-HHHHHHHHHHHHHHHHC
Q ss_conf             20103799874354766677751010---3653324679-99999845899999612
Q gi|254780915|r  376 DAPQYDGKGSGAFAHGTIPSVHPYIL---LNYLGKPQDV-MTLAHELGHGIHFVLSS  428 (626)
Q Consensus       376 D~~~r~gKr~GA~~~~~~~~~~~~I~---~N~~~~~~dv-~TL~HE~GHa~H~~ls~  428 (626)
                      .++--+.+...|||.+   +...+|.   +....+-+++ ..|+||+||..+.-...
T Consensus        65 ~~~vi~~~~~NAfa~p---gg~i~v~~gll~~~~~edELa~VlaHElgH~~~~H~~~  118 (253)
T 3c37_A           65 VFKVVKDDSVNAFAIP---GGRVYVHTGLLKAADNETELAGVLAHEINHAVARHGTR  118 (253)
T ss_dssp             EEEEECCCSCCEEEET---TTEEEEEHHHHHHCSSHHHHHHHHHHHHHHHHTTHHHH
T ss_pred             EEEEECCCCCCEEECC---CCEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHH
T ss_conf             8999758997847739---98177458899745677889999999999998752479


No 65 
>2cki_A Ulilysin; metalloprotease, hypothetical protein, hydrolase, IGF, cancer, metzincin, pappalysin, IGFBP protease; HET: ARG; 1.7A {Methanosarcina acetivorans} PDB: 2j83_A* 3lum_A* 3lun_A*
Probab=83.95  E-value=0.29  Score=25.47  Aligned_cols=15  Identities=33%  Similarity=0.408  Sum_probs=11.9

Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             467999999845899
Q gi|254780915|r  408 PQDVMTLAHELGHGI  422 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~  422 (626)
                      .+.-.||.||+||-+
T Consensus       160 ~~~g~Tl~HEvGH~L  174 (262)
T 2cki_A          160 FDKGRTATHEIGHWL  174 (262)
T ss_dssp             SCSSHHHHHHHHHHT
T ss_pred             CCCCCCCCEEHHHHC
T ss_conf             654432100000002


No 66 
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure initiative, structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=80.16  E-value=0.54  Score=23.49  Aligned_cols=48  Identities=23%  Similarity=0.256  Sum_probs=30.3

Q ss_pred             CHHCCCCCCCCCCCCCCCCCCCCEEECCCC----CCHHH-HHHHHHHHHHHHHH
Q ss_conf             201037998743547666777510103653----32467-99999984589999
Q gi|254780915|r  376 DAPQYDGKGSGAFAHGTIPSVHPYILLNYL----GKPQD-VMTLAHELGHGIHF  424 (626)
Q Consensus       376 D~~~r~gKr~GA~~~~~~~~~~~~I~~N~~----~~~~d-v~TL~HE~GHa~H~  424 (626)
                      .++--+...+-||+.+..+. ..+|+.+-.    -+-++ ...++||+||-.|+
T Consensus        45 ~v~v~~~~~~NAfa~G~~~~-~~~i~vt~gLl~~L~~~EL~aVlAHElgHi~~~   97 (107)
T 3cqb_A           45 TVAIYDSADINAFATGAKRD-DSLVAVSTGLLHNMTRDEAEAVLAHEVSHIANG   97 (107)
T ss_dssp             EEEEECCSSEEEEEECCC---CCEEEEEHHHHHHSCHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEEECCCCCEEEECCCCC-CEEEEECHHHHHHCCHHHHHHHHHHHHHHHHCC
T ss_conf             69998306861567414788-838997699997689999999999999999767


No 67 
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=79.29  E-value=1.1  Score=21.20  Aligned_cols=21  Identities=24%  Similarity=0.341  Sum_probs=16.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHC
Q ss_conf             467999999845899999612
Q gi|254780915|r  408 PQDVMTLAHELGHGIHFVLSS  428 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~H~~ls~  428 (626)
                      ..+.....||+||+++..++.
T Consensus       136 ~~~~DVv~HE~~HGvt~~~~g  156 (301)
T 1bqb_A          136 SGANDVVAHEITHGVTQQTAN  156 (301)
T ss_dssp             GGCHHHHHHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHHHCCCCCC
T ss_conf             210225888643121222368


No 68 
>2i47_A ADAM 17; TACE-inhibitor complex, hydrolase; HET: INN KGY; 1.90A {Homo sapiens} SCOP: d.92.1.10 PDB: 3g42_A*
Probab=78.69  E-value=0.65  Score=22.93  Aligned_cols=20  Identities=25%  Similarity=0.258  Sum_probs=14.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHH
Q ss_conf             324679999998458999996
Q gi|254780915|r  406 GKPQDVMTLAHELGHGIHFVL  426 (626)
Q Consensus       406 ~~~~dv~TL~HE~GHa~H~~l  426 (626)
                      .....+.+++||+||.+ |+-
T Consensus       184 ~~~~~~~~~aHElGH~L-G~~  203 (288)
T 2i47_A          184 LTKEADLVTTHELGHNF-GAE  203 (288)
T ss_dssp             CHHHHHHHHHHHHHHHT-TCC
T ss_pred             CHHHHHHHHHHHHHHHC-CCC
T ss_conf             13577889999868760-787


No 69 
>1z7h_A Tetanus toxin light chain; TENT, metalloprotease, snare, neurotransmission, hydrolase; 2.30A {Clostridium tetani} PDB: 1yvg_A
Probab=78.35  E-value=0.94  Score=21.80  Aligned_cols=22  Identities=27%  Similarity=0.347  Sum_probs=19.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             4679999998458999996125
Q gi|254780915|r  408 PQDVMTLAHELGHGIHFVLSSE  429 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~H~~ls~~  429 (626)
                      .|=+.+|.||+=|++|+++.-+
T Consensus       229 ~DPAl~LmheLIhsLh~LYGik  250 (447)
T 1z7h_A          229 QDPALLLMHELIHVLHGLYGMQ  250 (447)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHCCCC
T ss_conf             2889999999999988760746


No 70 
>3b4r_A Putative zinc metalloprotease MJ0392; intramembrane protease, CBS domain, hydrolase, metal-binding, transmembrane; 3.30A {Methanocaldococcus jannaschii}
Probab=78.30  E-value=0.81  Score=22.24  Aligned_cols=18  Identities=33%  Similarity=0.351  Sum_probs=13.0

Q ss_pred             HHHHHHHHHHHHHHHHHC
Q ss_conf             999999845899999612
Q gi|254780915|r  411 VMTLAHELGHGIHFVLSS  428 (626)
Q Consensus       411 v~TL~HE~GHa~H~~ls~  428 (626)
                      +..++||+||++=...-.
T Consensus        49 ~sv~~HE~gH~~~a~~~G   66 (224)
T 3b4r_A           49 VSVVLHELGHSYVAKKYG   66 (224)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCC
T ss_conf             999999999999999979


No 71 
>1t3c_A Neurotoxin type E; catalytic domain, E212Q mutant, light chain, hydrolase; 1.90A {Clostridium botulinum} SCOP: d.92.1.7 PDB: 3d3x_A 1t3a_A 1zl5_A 1zl6_A 1zn3_A 1zkw_A 1zkx_A
Probab=77.95  E-value=0.98  Score=21.67  Aligned_cols=22  Identities=27%  Similarity=0.462  Sum_probs=19.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             4679999998458999996125
Q gi|254780915|r  408 PQDVMTLAHELGHGIHFVLSSE  429 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~H~~ls~~  429 (626)
                      .|=+.+|.||+=|++|+++.-+
T Consensus       203 ~DPAl~L~heLIhsLh~LYGik  224 (421)
T 1t3c_A          203 QDPALTLMHQLIHSLHGLYGAK  224 (421)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHCCCC
T ss_conf             4889999999999988762766


No 72 
>1epw_A Bontoxilysin B, botulinum neurotoxin type B; zinc, metalloprotease, transmembrane, hydrolase; 1.90A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 1f31_A* 1g9a_A* 1g9b_A* 1g9c_A* 1g9d_A* 1i1e_A* 1s0b_A 1s0c_A 1s0d_A 1s0e_A 1s0f_A 1s0g_A 2np0_A 2etf_A 1z0h_A 2nm1_A 3g94_A 1f82_A
Probab=77.57  E-value=1.9  Score=19.65  Aligned_cols=18  Identities=11%  Similarity=-0.104  Sum_probs=13.5

Q ss_pred             CHHHHHHHHHHHHHHHHH
Q ss_conf             005999886888999999
Q gi|254780915|r  438 SSLTLAETASIFGETLTF  455 (626)
Q Consensus       438 ~~~~~aE~~S~~~E~~~~  455 (626)
                      +.-+..++-||++...|+
T Consensus       700 v~qW~t~~~TQf~~l~~~  717 (1290)
T 1epw_A          700 VAQWLSTVNTQFYTIKEG  717 (1290)
T ss_dssp             HHHHHHHTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999


No 73 
>2qn0_A Neurotoxin; botulism, snares, protease; 1.75A {Clostridium botulinum} PDB: 3deb_A
Probab=76.86  E-value=1.1  Score=21.31  Aligned_cols=22  Identities=27%  Similarity=0.496  Sum_probs=19.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             4679999998458999996125
Q gi|254780915|r  408 PQDVMTLAHELGHGIHFVLSSE  429 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~H~~ls~~  429 (626)
                      .|=+.+|.||+=|++|+++.-+
T Consensus       221 ~DPAl~LmheLIhsLh~LYGik  242 (430)
T 2qn0_A          221 MDPILILMHELNHAMHNLYGIA  242 (430)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHCCC
T ss_conf             2889999999999988760656


No 74 
>2fpq_A Botulinum neurotoxin D light chain; hexxh metalloprotease; 1.65A {Clostridium botulinum}
Probab=73.85  E-value=1.5  Score=20.42  Aligned_cols=22  Identities=32%  Similarity=0.516  Sum_probs=19.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             4679999998458999996125
Q gi|254780915|r  408 PQDVMTLAHELGHGIHFVLSSE  429 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~H~~ls~~  429 (626)
                      .|=+.+|.||+=|++|+++.-+
T Consensus       229 ~DPAl~LmheLIhsLh~LYGIk  250 (444)
T 2fpq_A          229 MDPVIALMHELTHSLHQLYGIN  250 (444)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHCCCC
T ss_conf             1889999999999988751656


No 75 
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=73.77  E-value=1.9  Score=19.63  Aligned_cols=22  Identities=23%  Similarity=0.276  Sum_probs=16.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             2467999999845899999612
Q gi|254780915|r  407 KPQDVMTLAHELGHGIHFVLSS  428 (626)
Q Consensus       407 ~~~dv~TL~HE~GHa~H~~ls~  428 (626)
                      ...+.....||+||++..-++.
T Consensus       133 ~~~~~DVv~HE~tHGvt~~~~g  154 (316)
T 3dnz_A          133 LSGGIDVVAHELTHAVTDYTAG  154 (316)
T ss_dssp             GGGCHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCHHHHHHHHHHHEEECCCC
T ss_conf             5443036756400012233668


No 76 
>1e1h_A BONT/A LC, botulinum neurotoxin type A light chain; Zn-endopeptidase, complex, substrate bound, inhibitor bound, hydrolase; 1.80A {Clostridium botulinum} SCOP: d.92.1.7
Probab=73.40  E-value=1.5  Score=20.30  Aligned_cols=22  Identities=36%  Similarity=0.410  Sum_probs=19.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             4679999998458999996125
Q gi|254780915|r  408 PQDVMTLAHELGHGIHFVLSSE  429 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~H~~ls~~  429 (626)
                      .|=+.+|.||+=|++|+++.-+
T Consensus       252 ~DPAl~LmheLIhsLh~LYGik  273 (287)
T 1e1h_A          252 TDPAVTLAHELIHAEHRLYGIA  273 (287)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHCCC
T ss_conf             2889999999999988750622


No 77 
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=73.01  E-value=1.2  Score=21.13  Aligned_cols=27  Identities=19%  Similarity=0.391  Sum_probs=15.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             679999998458999996125687765
Q gi|254780915|r  409 QDVMTLAHELGHGIHFVLSSETQGILT  435 (626)
Q Consensus       409 ~dv~TL~HE~GHa~H~~ls~~~~~~~~  435 (626)
                      +=..+.+||+||++=---|.....+++
T Consensus       367 ~l~~VAaHEiGHsLGL~HS~~~~siM~  393 (631)
T 1ck7_A          367 SLFLVAAHAFGHAMGLEHSQDPGALMA  393 (631)
T ss_dssp             EHHHHHHHHHHHHHTCCCCCCTTSTTS
T ss_pred             CCCEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf             011243176024447676888777436


No 78 
>1sat_A Serratia protease; parallel beta helix, parallel beta roll, hydrolase (serine protease); 1.75A {Serratia marcescens} SCOP: b.80.7.1 d.92.1.6 PDB: 1af0_A 1smp_A 1srp_A
Probab=70.22  E-value=1.6  Score=20.17  Aligned_cols=13  Identities=38%  Similarity=0.782  Sum_probs=11.1

Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             7999999845899
Q gi|254780915|r  410 DVMTLAHELGHGI  422 (626)
Q Consensus       410 dv~TL~HE~GHa~  422 (626)
                      .-.|+.||.|||+
T Consensus       170 g~~t~~HEIGHAL  182 (471)
T 1sat_A          170 GRQTFTHEIGHAL  182 (471)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCC
T ss_conf             5302033002334


No 79 
>1l6j_A Matrix metalloproteinase-9; twisted beta sheet flanked by helices, hydrolase; 2.50A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2
Probab=69.44  E-value=1.2  Score=20.94  Aligned_cols=16  Identities=31%  Similarity=0.486  Sum_probs=12.1

Q ss_pred             HHHHHHHHHHHHHHHH
Q ss_conf             4679999998458999
Q gi|254780915|r  408 PQDVMTLAHELGHGIH  423 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~H  423 (626)
                      +.=-.+-+|||||++=
T Consensus       374 ~~lf~vaahefGh~lG  389 (425)
T 1l6j_A          374 YSLFLVAAHEFGHALG  389 (425)
T ss_dssp             EEHHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHHHC
T ss_conf             3157888887775403


No 80 
>3ffz_A Botulinum neurotoxin type E; botulinum neurotoxin serotype E, botulism, domain organization, endopeptidase, translocation, hydrolase; 2.65A {Clostridium botulinum}
Probab=68.13  E-value=2.3  Score=18.97  Aligned_cols=18  Identities=11%  Similarity=0.032  Sum_probs=11.2

Q ss_pred             CHHHHHHHHHHHHHHHHH
Q ss_conf             005999886888999999
Q gi|254780915|r  438 SSLTLAETASIFGETLTF  455 (626)
Q Consensus       438 ~~~~~aE~~S~~~E~~~~  455 (626)
                      ++-+..++-||++...|+
T Consensus       686 v~qWlt~~~TQf~~i~~~  703 (1252)
T 3ffz_A          686 VSNWMTKINTQFNKRKEQ  703 (1252)
T ss_dssp             HHHHHHHTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999


No 81 
>3khi_A Putative metal-dependent hydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.95A {Klebsiella pneumoniae subsp} PDB: 3dl1_A
Probab=65.17  E-value=4.8  Score=16.71  Aligned_cols=49  Identities=6%  Similarity=0.007  Sum_probs=30.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHC--CCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             67999999845899999612--56877657800599988688899999999
Q gi|254780915|r  409 QDVMTLAHELGHGIHFVLSS--ETQGILTNNSSLTLAETASIFGETLTFDS  457 (626)
Q Consensus       409 ~dv~TL~HE~GHa~H~~ls~--~~~~~~~~~~~~~~aE~~S~~~E~~~~~~  457 (626)
                      |...+.+|||.|.+|..-..  ..+|+...........+-+..++.++.+-
T Consensus       143 dG~NvviHEFAH~LD~~~G~~~g~ppl~~~~~~~~W~~~~~~~~~~l~~~~  193 (267)
T 3khi_A          143 SGFNLVVHEVAHKLDTRNGDRASGVPLIPLREVAGWEHDLHAAMNNIQDEI  193 (267)
T ss_dssp             SSCCHHHHHHHHHHHTTTSCCCCSCCSCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             870269989999987625875799888855668999999999999999999


No 82 
>1eak_A 72 kDa type IV collagenase; hydrolyse, matrix metalloproteinase, gelatinase A; 2.66A {Homo sapiens} SCOP: a.20.1.2 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1ks0_A 1cxw_A
Probab=65.11  E-value=2  Score=19.47  Aligned_cols=14  Identities=29%  Similarity=0.610  Sum_probs=11.5

Q ss_pred             HHHHHHHHHHHHHH
Q ss_conf             67999999845899
Q gi|254780915|r  409 QDVMTLAHELGHGI  422 (626)
Q Consensus       409 ~dv~TL~HE~GHa~  422 (626)
                      +=..+-+|||||++
T Consensus       365 ~L~~Va~HE~GH~L  378 (421)
T 1eak_A          365 SLFLVAAHQFGHAM  378 (421)
T ss_dssp             EHHHHHHHHHHHHT
T ss_pred             CEEEEEHHHHCCCC
T ss_conf             41311032422203


No 83 
>2di4_A Zinc protease, cell division protein FTSH homolog; metalloproteinase, hexamer-ring, hydrolase; 2.79A {Aquifex aeolicus} SCOP: a.269.1.1
Probab=64.85  E-value=4.2  Score=17.12  Aligned_cols=22  Identities=23%  Similarity=0.315  Sum_probs=16.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             9999998458999996125687
Q gi|254780915|r  411 VMTLAHELGHGIHFVLSSETQG  432 (626)
Q Consensus       411 v~TL~HE~GHa~H~~ls~~~~~  432 (626)
                      -.|=.||.|||+=+++.....+
T Consensus        17 ~~iA~HEAGHAvva~~l~~~~~   38 (238)
T 2di4_A           17 EKIAIHEAGHALMGLVSDDDDK   38 (238)
T ss_dssp             HHHHHHHHHHHHHHHHCSSCCC
T ss_pred             HHHHHHHHHHHHHHHHCCCCCC
T ss_conf             9999999999999998178897


No 84 
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=63.04  E-value=2.7  Score=18.58  Aligned_cols=19  Identities=32%  Similarity=0.300  Sum_probs=14.8

Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q ss_conf             6799999984589999961
Q gi|254780915|r  409 QDVMTLAHELGHGIHFVLS  427 (626)
Q Consensus       409 ~dv~TL~HE~GHa~H~~ls  427 (626)
                      -+....+||+||++..-.+
T Consensus       134 ~s~DVv~HE~~HGvt~~~~  152 (306)
T 3nqx_A          134 VSLDVSAHEVSHGFTEQNS  152 (306)
T ss_dssp             CCHHHHHHHHHHHHHHTTT
T ss_pred             CCHHHHHHHHHCCCCCCCC
T ss_conf             3123787763021100357


No 85 
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=62.56  E-value=3.5  Score=17.72  Aligned_cols=13  Identities=38%  Similarity=0.511  Sum_probs=10.4

Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             9999998458999
Q gi|254780915|r  411 VMTLAHELGHGIH  423 (626)
Q Consensus       411 v~TL~HE~GHa~H  423 (626)
                      -.|+.||+||=+.
T Consensus        90 ~~TliHEigHHfe  102 (130)
T 2ejq_A           90 WETMLHELRHHLE  102 (130)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
T ss_conf             8999765146536


No 86 
>2nyy_A Botulinum neurotoxin type A; neurotoxin, FAB, protein antibody complex, toxin/immune system complex; 2.61A {Clostridium botulinum} PDB: 2nz9_A 3bta_A
Probab=61.90  E-value=3.6  Score=17.61  Aligned_cols=16  Identities=13%  Similarity=-0.049  Sum_probs=7.8

Q ss_pred             HHHHHHHHHHHHHHHH
Q ss_conf             0599988688899999
Q gi|254780915|r  439 SLTLAETASIFGETLT  454 (626)
Q Consensus       439 ~~~~aE~~S~~~E~~~  454 (626)
                      +-+..++-|||+..-|
T Consensus       714 ~qWlt~~~TQf~~i~~  729 (1295)
T 2nyy_A          714 TNWLAKVNTQIDLIRK  729 (1295)
T ss_dssp             HHHHHHTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
T ss_conf             9999999999999999


No 87 
>1lml_A Leishmanolysin; metalloprotease, glycoprotein; 1.86A {Leishmania major} SCOP: d.92.1.3
Probab=56.31  E-value=5.2  Score=16.52  Aligned_cols=13  Identities=23%  Similarity=0.514  Sum_probs=8.3

Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             7999999845899
Q gi|254780915|r  410 DVMTLAHELGHGI  422 (626)
Q Consensus       410 dv~TL~HE~GHa~  422 (626)
                      -+.|++||+.||+
T Consensus       159 ~~~~~~HEi~H~L  171 (478)
T 1lml_A          159 VTRVVTHEMAHAL  171 (478)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHH
T ss_conf             9999999998874


No 88 
>3csk_A Probable dipeptidyl-peptidase 3; Zn-hydrolase, aminodipeptidase, hexxgh-motif, aminopeptidase, cytoplasm, hydrolase, metal-binding; 1.95A {Saccharomyces cerevisiae}
Probab=54.63  E-value=2.6  Score=18.68  Aligned_cols=47  Identities=23%  Similarity=0.244  Sum_probs=26.2

Q ss_pred             CCHHHHHHHHHHH-HHHHHHHHHCC---------CCC--CC----------CCCCHHHHHHHHHHHHHH
Q ss_conf             3246799999984-58999996125---------687--76----------578005999886888999
Q gi|254780915|r  406 GKPQDVMTLAHEL-GHGIHFVLSSE---------TQG--IL----------TNNSSLTLAETASIFGET  452 (626)
Q Consensus       406 ~~~~dv~TL~HE~-GHa~H~~ls~~---------~~~--~~----------~~~~~~~~aE~~S~~~E~  452 (626)
                      ....++.|.+||+ ||+.=-++...         +++  ..          +..+.--|-+++|.+=|-
T Consensus       450 ~~af~~~v~lHEllGHGsGkll~~~~~g~nfd~~n~~~~~tg~~i~~~y~~geT~~s~f~~~ast~EEc  518 (711)
T 3csk_A          450 SDSFEVQVDIHELLGHGSGKLLTEFTDGFNFDKENPPLGLDGKPVSTYYKVGETWGSKFGQLAGPFEEC  518 (711)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCCBEETTEESSCSSSCCBCTTSSBCCCCBCTTCCHHHHHGGGHHHHHHH
T ss_pred             CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHCCCCHHHHH
T ss_conf             302888888988723777745301478655553467878788754011268875766653011219999


No 89 
>2kkm_A Translation machinery-associated protein 16; nucleus, structural genomics, PSI-2, protein structure initiative; NMR {Saccharomyces cerevisiae}
Probab=53.78  E-value=7.4  Score=15.38  Aligned_cols=66  Identities=15%  Similarity=0.165  Sum_probs=40.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCC--------------------CCCCCCCCCCCCCC
Q ss_conf             7779989999999986666328999999986424850201037998--------------------74354766677751
Q gi|254780915|r  339 QDIIPFEVARDLVLQSYAKFSPQMSIIAEKFFTHNWIDAPQYDGKG--------------------SGAFAHGTIPSVHP  398 (626)
Q Consensus       339 ~~~~~~ee~~~~v~~~~~~~~~e~~~~~~~~~~~~~iD~~~r~gKr--------------------~GA~~~~~~~~~~~  398 (626)
                      ...++.+++..+|..-+..+++|+.++-..          -|+|.+                    +|=||..+......
T Consensus        42 ~~~~t~ee~~~lI~~yl~R~d~Ele~ik~~----------rR~gRp~s~Re~~l~~~~~~E~~ey~tGf~iPDLtd~~nv  111 (144)
T 2kkm_A           42 QPIFDHAHTREFIQSFIERDDTELDELKKK----------RRSNRPPSNRQVLLQQRRDQELKEFKAGFLCPDLSDAKNM  111 (144)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHH----------GGGTCCCTTHHHHHHHHHHHHHHHHHTTEEEECSCCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHCCCHHHHHHHHH----------HCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
T ss_conf             677899999999999984687999999987----------1689998439999999999999998229237877998999


Q ss_pred             EEECCCCCCHHHHHHH
Q ss_conf             0103653324679999
Q gi|254780915|r  399 YILLNYLGKPQDVMTL  414 (626)
Q Consensus       399 ~I~~N~~~~~~dv~TL  414 (626)
                      -.+-+|+|++..+.+|
T Consensus       112 ~~Lr~WnG~~~~l~~l  127 (144)
T 2kkm_A          112 EFLRNWNGTFGLLNTL  127 (144)
T ss_dssp             HHHHTCSSCSTHHHHS
T ss_pred             HHHHHHCCCHHHCCCE
T ss_conf             9999828981107620


No 90 
>2x7m_A Archaemetzincin; metalloprotease, protease, hydrolase, metal-bindi; 1.50A {Methanopyrus kandleri}
Probab=48.33  E-value=5.6  Score=16.24  Aligned_cols=50  Identities=22%  Similarity=0.181  Sum_probs=26.7

Q ss_pred             HHHCCCCCHHCCCCCCCCCCCCCCCC-CCCCEEECCCC--C------CHHHHHHHHHHHHHHH
Q ss_conf             64248502010379987435476667-77510103653--3------2467999999845899
Q gi|254780915|r  369 FFTHNWIDAPQYDGKGSGAFAHGTIP-SVHPYILLNYL--G------KPQDVMTLAHELGHGI  422 (626)
Q Consensus       369 ~~~~~~iD~~~r~gKr~GA~~~~~~~-~~~~~I~~N~~--~------~~~dv~TL~HE~GHa~  422 (626)
                      .+.--..|+|+ ++   ..|.+|.-. +...-|+..+-  .      -.+-+.|..||+||.+
T Consensus        93 vlgvT~~DLY~-~~---~nFVFG~A~~~~~vaVVS~~RL~~~~~~l~l~Rv~Kea~HElGHlf  151 (195)
T 2x7m_A           93 VLGLTSEDLYA-PG---LNFVFGQARCPGREAVVSVARLLDPDPELYLERVVKELTHELGHTF  151 (195)
T ss_dssp             EEEEESSCEEC-TT---CSCBSEEECSSSSEEEEECTTTCCSSHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEEECCCCCC-CC---CCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             99996555677-88---8669897365998799980015897677999999999999989871


No 91 
>3fvy_A Dipeptidyl-peptidase 3; SGC, DPP3, alternative splicing, aminopeptidase, cytoplasm, hydrolase, metal-binding, metalloprotease, phosphoprotein; 1.90A {Homo sapiens}
Probab=45.57  E-value=5.7  Score=16.23  Aligned_cols=49  Identities=12%  Similarity=0.079  Sum_probs=29.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCHHHHHHHHHCCC
Q ss_conf             5799189999999999999999998874169-887199899999984690
Q gi|254780915|r  114 CNLSSPTIRKFYTDINAKLADFEKVLIFFAL-EINTLDEALLEQSYAQDP  162 (626)
Q Consensus       114 ~dt~d~~~~~~~~~~~~~~s~~~~~l~~~~~-e~~~l~e~~l~~~~~~~~  162 (626)
                      ...++++++.+..-+...++..++..+|-+. -+-+++.+.++.++...+
T Consensus        84 ~~~~~~e~~~fl~Ya~~f~~n~Gny~~fGd~KFiP~~s~e~f~~lv~~s~  133 (728)
T 3fvy_A           84 EGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPKEKLERVILGSE  133 (728)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHTSSBCTTTCBBCCCSSCHHHHHHHHHHSH
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf             69998999999999999986067756677877788999999999997170


No 92 
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=43.51  E-value=9.5  Score=14.62  Aligned_cols=21  Identities=29%  Similarity=0.468  Sum_probs=15.2

Q ss_pred             HHHHHHHHHHHHHHHHCCCCC
Q ss_conf             999998458999996125687
Q gi|254780915|r  412 MTLAHELGHGIHFVLSSETQG  432 (626)
Q Consensus       412 ~TL~HE~GHa~H~~ls~~~~~  432 (626)
                      .|-.||.|||+=+++.....+
T Consensus       289 ~iA~HEAGHAlVa~ll~~~~~  309 (499)
T 2dhr_A          289 ITAYHEAGHALAAHFLEHADG  309 (499)
T ss_dssp             HHHHHHHHHHHHHCCSSSCCC
T ss_pred             HHHHHHHHHHHHHHHCCCCCC
T ss_conf             999999999999986578997


No 93 
>1g12_A Peptidyl-Lys metalloendopeptidase; zinc cordinate,metalloprotease, hydrolase; HET: MAN; 1.60A {Grifola frondosa} SCOP: d.92.1.12 PDB: 1ge5_A* 1ge6_A* 1ge7_A*
Probab=42.83  E-value=11  Score=14.23  Aligned_cols=17  Identities=35%  Similarity=0.348  Sum_probs=13.1

Q ss_pred             CCCHHHHHHHHHHHHHH
Q ss_conf             33246799999984589
Q gi|254780915|r  405 LGKPQDVMTLAHELGHG  421 (626)
Q Consensus       405 ~~~~~dv~TL~HE~GHa  421 (626)
                      .+.-+-+.||.||+-|.
T Consensus       106 ~~~~~~a~tllHE~tH~  122 (167)
T 1g12_A          106 TGTDSQAGTLVHESSHF  122 (167)
T ss_dssp             SSTTCHHHHHHHHHHHS
T ss_pred             CCCCCCHHHHHHHHHCC
T ss_conf             89887416788887612


No 94 
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=41.35  E-value=11  Score=14.07  Aligned_cols=20  Identities=20%  Similarity=0.333  Sum_probs=15.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHC
Q ss_conf             67999999845899999612
Q gi|254780915|r  409 QDVMTLAHELGHGIHFVLSS  428 (626)
Q Consensus       409 ~dv~TL~HE~GHa~H~~ls~  428 (626)
                      .++...+||+||++-...+.
T Consensus       155 ~~lDVIaHEltHGVt~~~ag  174 (341)
T 2vqx_A          155 IAIDVVGHALAHGVTESEAG  174 (341)
T ss_dssp             SCHHHHHHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHHCCCCCC
T ss_conf             30478987634231214578


No 95 
>3lmc_A Peptidase, zinc-dependent; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Methanocorpusculum labreanum}
Probab=41.31  E-value=8.4  Score=15.00  Aligned_cols=15  Identities=40%  Similarity=0.397  Sum_probs=11.7

Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             679999998458999
Q gi|254780915|r  409 QDVMTLAHELGHGIH  423 (626)
Q Consensus       409 ~dv~TL~HE~GHa~H  423 (626)
                      +-+.+..||+||.+.
T Consensus       142 Rv~Kea~HElGHlfG  156 (210)
T 3lmc_A          142 RIVKEGAHEIGHLFG  156 (210)
T ss_dssp             HHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHCC
T ss_conf             999999998898728


No 96 
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=38.67  E-value=12  Score=13.79  Aligned_cols=22  Identities=18%  Similarity=0.265  Sum_probs=15.9

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             9999998458999996125687
Q gi|254780915|r  411 VMTLAHELGHGIHFVLSSETQG  432 (626)
Q Consensus       411 v~TL~HE~GHa~H~~ls~~~~~  432 (626)
                      =.+-.||.|||+=+++.....|
T Consensus       273 ~riA~HEAGHAvva~ll~~~~~  294 (476)
T 2ce7_A          273 RIIAYHEAGHAVVSTVVPNGEP  294 (476)
T ss_dssp             HHHHHHHHHHHHHHHHSTTCCC
T ss_pred             HHHHHHHHHHHHHHHHCCCCCC
T ss_conf             4331799999999997799997


No 97 
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=36.26  E-value=14  Score=13.53  Aligned_cols=21  Identities=29%  Similarity=0.256  Sum_probs=16.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHC
Q ss_conf             467999999845899999612
Q gi|254780915|r  408 PQDVMTLAHELGHGIHFVLSS  428 (626)
Q Consensus       408 ~~dv~TL~HE~GHa~H~~ls~  428 (626)
                      .-+....+||+||++....+.
T Consensus       132 ~~s~DVvaHE~tHGvt~~~ag  152 (301)
T 1u4g_A          132 LVSLDVAAHEVSHGFTEQNSG  152 (301)
T ss_dssp             SCCHHHHHHHHHHHHHHTTTC
T ss_pred             CCHHHHHHHHHHCCEEECCCC
T ss_conf             521568988630103332678


No 98 
>1mw5_A Hypothetical protein HI1480; structural genomics, structure 2 function project, S2F, unknown function; HET: MSE; 2.10A {Haemophilus influenzae} SCOP: d.259.1.1
Probab=32.95  E-value=15  Score=13.17  Aligned_cols=20  Identities=35%  Similarity=0.253  Sum_probs=15.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHH
Q ss_conf             24679999998458999996
Q gi|254780915|r  407 KPQDVMTLAHELGHGIHFVL  426 (626)
Q Consensus       407 ~~~dv~TL~HE~GHa~H~~l  426 (626)
                      ...+|-||||||...+--+-
T Consensus        19 klysvatlfhefsevitkle   38 (187)
T 1mw5_A           19 KLYSVATLFHEFSEVITKLE   38 (187)
T ss_dssp             EEECHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHH
T ss_conf             78889999999999999988


No 99 
>3e11_A Predicted zincin-like metalloprotease; YP_873820.1, structural genomics, joint center for structural genomics, JCSG; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=27.51  E-value=19  Score=12.55  Aligned_cols=20  Identities=25%  Similarity=0.373  Sum_probs=13.0

Q ss_pred             CCCCCCHHHH-----HHHHHHHHHH
Q ss_conf             3653324679-----9999984589
Q gi|254780915|r  402 LNYLGKPQDV-----MTLAHELGHG  421 (626)
Q Consensus       402 ~N~~~~~~dv-----~TL~HE~GHa  421 (626)
                      +.+..+.+++     .|+.||.||-
T Consensus        77 ~~~~~~~~eL~~~V~~tlvhEiah~  101 (114)
T 3e11_A           77 CALCETESEVIDEVRKTVVHEIAHH  101 (114)
T ss_dssp             HHTCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf             9987785789999999999999998


No 100
>3b73_A PHIH1 repressor-like protein; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 2.12A {Haloarcula marismortui atcc 43049}
Probab=25.80  E-value=20  Score=12.34  Aligned_cols=26  Identities=23%  Similarity=0.215  Sum_probs=11.6

Q ss_pred             HHHHHHHCCCCCCHHHHHHHCCCCCC
Q ss_conf             99999832699997999997088989
Q gi|254780915|r  579 KYLNILRAGNSKHYSELLLPLNINLS  604 (626)
Q Consensus       579 ~y~~~L~~Ggs~~~~el~k~~G~d~~  604 (626)
                      +.+.+|+.-|...|.++.+..|++.|
T Consensus        17 rILE~L~e~g~~t~~eIA~~lgi~~S   42 (111)
T 3b73_A           17 RILEIIHEEGNGSPKELEDRDEIRIS   42 (111)
T ss_dssp             HHHHHHHHHSCBCHHHHHTSTTCCSC
T ss_pred             HHHHHHHHCCCCCHHHHHHHHCCCCC
T ss_conf             99999998499999999998688847


No 101
>1bm4_A Protein (moloney murine leukemia virus capsid); moloney murine leukemia virus capsid protein, momlv, MU-MLV, MHR, major homology region; NMR {Synthetic} SCOP: j.47.1.1
Probab=21.98  E-value=23  Score=11.84  Aligned_cols=17  Identities=29%  Similarity=0.120  Sum_probs=11.5

Q ss_pred             HHHHHHHHHHHHHHHHH
Q ss_conf             99886888999999998
Q gi|254780915|r  442 LAETASIFGETLTFDSL  458 (626)
Q Consensus       442 ~aE~~S~~~E~~~~~~~  458 (626)
                      -.|.||+|+|.++--|.
T Consensus        11 ~~EsPs~FlERL~EayR   27 (32)
T 1bm4_A           11 PNESPSAFLERLKEAYR   27 (32)
T ss_dssp             GGGHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHH
T ss_conf             88885999999999987


No 102
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=21.55  E-value=24  Score=11.78  Aligned_cols=107  Identities=9%  Similarity=0.096  Sum_probs=49.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCCCCHHHHHHHH
Q ss_conf             889278999999999999999999742331023349989999999999999999999-9999986420579918999999
Q gi|254780915|r   47 SHDSQEISNDMECIEHESLAFKTRWEGNLAHATNQKNCHSLGAAIAEYERICELIGR-IASYAMLSYNCNLSSPTIRKFY  125 (626)
Q Consensus        47 ~~~~~e~~~dl~~~~~~i~~~~~~~~~~l~~~~~~~~~~~l~~~l~~~e~i~~~l~r-v~~ya~l~~s~dt~d~~~~~~~  125 (626)
                      ..++|.|=..+..++..+..+....++-+.      ....+..++..+......+.. +..+..-....-..|+......
T Consensus        13 ~~DSP~FR~~l~~~e~~~~~l~~~l~~l~k------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~dd~~~~~~L   86 (265)
T 2q12_A           13 LEDSPQTRSLLGVFEEDATAISNYMNQLYQ------AMHRIYDAQNELSAATHLTSKLLKEYEKQRFPLGGDDEVMSSTL   86 (265)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHGGGGSCCC-----CHHHHHH
T ss_pred             HHCCHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf             713988899999999989999999999999------99999999999999999999998873454125568808799999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf             9999999999998874169887199899999984
Q gi|254780915|r  126 TDINAKLADFEKVLIFFALEINTLDEALLEQSYA  159 (626)
Q Consensus       126 ~~~~~~~s~~~~~l~~~~~e~~~l~e~~l~~~~~  159 (626)
                      .++...+.++......+...+...--..+..++.
T Consensus        87 ~~f~~~l~ei~~~~~~l~~~~~~~~~~pL~~f~~  120 (265)
T 2q12_A           87 QQFSKVIDELSSCHAVLSTQLADAMMFPITQFKE  120 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999999899999989999987


Done!