HHSEARCH alignment of GI: 254780915 and SCOP domain: d1i1ip_

Alignment
>d1i1ip_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet oligopeptidase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=0  Score=540.07  Aligned_cols=544  Identities=15%  Similarity=0.124  Sum_probs=382.5

Q ss_pred             CCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             24776793572788892789999999999999999997423310233-49989999999999999999999999998642
Q gi|254780915|r   34 GNLPRWNLEDLYPSHDSQEISNDMECIEHESLAFKTRWEGNLAHATN-QKNCHSLGAAIAEYERICELIGRIASYAMLSY  112 (626)
Q Consensus        34 ~~~~~WdL~~ly~~~~~~e~~~dl~~~~~~i~~~~~~~~~~l~~~~~-~~~~~~l~~~l~~~e~i~~~l~rv~~ya~l~~  112 (626)
                      ...+|||+++=       ++.+..+.       ...+.+..+..|.. ..+.++|+|+|.++++++..++++...+.+..
T Consensus         9 ~~~~~w~~tPe-------~i~~~~~~-------~i~~~~~~id~I~~~~~~~~Tfen~i~~ld~~~~~l~~~~~~~~~l~   74 (665)
T d1i1ip_           9 RNVLRWDLSPE-------QIKTRTEQ-------LIAQTKQVYDTVGTIALKEVTYENCLQVLADIEVTYIVERTMLDFPQ   74 (665)
T ss_dssp             TCCCCSCCCHH-------HHHHHHHH-------HHHHHHHHHHHHTTSCGGGCCTTTTHHHHHHHHHHHHHHHHHHHSHH
T ss_pred             CCCCCCCCCHH-------HHHHHHHH-------HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             88687768889-------99999999-------99999999999974898999999999999997779999999999987


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH---HHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf             057991899999999999999999988741698871998999999---84690011117999999974233171679987
Q gi|254780915|r  113 NCNLSSPTIRKFYTDINAKLADFEKVLIFFALEINTLDEALLEQS---YAQDPLTLKYSAWIKNIRKIKKHLLSNDMECL  189 (626)
Q Consensus       113 s~dt~d~~~~~~~~~~~~~~s~~~~~l~~~~~e~~~l~e~~l~~~---~~~~~~l~~y~~~~~~l~~~~~~~l~~~~E~~  189 (626)
                      +++ +|+++++...++.++++++.+.+........++.. ..+.-   -..++..+-....+.+..+...+.-.+..+++
T Consensus        75 ~v~-~d~~~r~a~~~~~~~l~~~~~~i~~n~~Ly~~l~~-l~~~~~~~~L~~E~~rlle~~l~df~~sG~~L~~~~r~r~  152 (665)
T d1i1ip_          75 HVS-SDREVRAASTEADKKLSRFDIEMSMREDVFQRIVH-LQETCDLEKIKPEARRYLEKSIKMGKRNGLHLSEHIRNEI  152 (665)
T ss_dssp             HHC-SCHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHH-HHHHSCTTSSCHHHHHHHHHHHHHHHHTTTTSCHHHHHHH
T ss_pred             HCC-CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH-HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf             059-99999999999999999999986368999999999-9738664469999999999999999975888996788999


Q ss_pred             HHHHHHH-------------------------CCCHHHHHHHHHHHHHHHHHHCCCCC---HHHHHHHHHCCCHHHHHHH
Q ss_conf             6630010-------------------------00367777776444433221003475---2332135418887679999
Q gi|254780915|r  190 LSDTSQV-------------------------GREALKRFFCENIESLRFKINDQKIP---LTKAYKSFFDSDREVRKSA  241 (626)
Q Consensus       190 l~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~dr~~Rk~a  241 (626)
                      .......                         .+.+......    ..+....+...+   ....+.+.+++||++|+++
T Consensus       153 ~~l~~els~l~~~F~~nl~~~~~~~~~~~~~L~Glp~~~~~~----~~~~~~~~~~itl~~p~~~~~l~~~~~~~lR~~~  228 (665)
T d1i1ip_         153 KSMKKRMSELCIDFNKNLNEDDTSLVFSKAELGALPDDFIDS----LEKTDEDKYKVTLKYPHYFPVMKKCCVPETRRKM  228 (665)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCCEEEECTGGGTTCCHHHHHT----SCBCSSSCEEEESSHHHHHHHHHHCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHH----HHHHCCCCCEEECCCCCCCHHHHHCCCHHHHHHH
T ss_conf             999999998899999975120145205676633798799999----9871688716644666642155426757899999


Q ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC-CHHHHHHHHHHHHHCCHHHHHHHHHHHH---
Q ss_conf             999999865054216999999866678865427899988976222258-9899999999876306289999999999---
Q gi|254780915|r  242 AKALSHTFNKSSHIFSFITNTLAKDEEIQDRWRKYEKIADSRHLSNNV-EPYVIEALMQSVKNYYPKTSHRYYELKK---  317 (626)
Q Consensus       242 ~~a~~~~~~~~~~~~a~il~~iv~~r~e~A~llGy~s~~~~~l~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~---  317 (626)
                      |.|+.+++.   ..|..++.+|+++|.+.|+++||+||++++|..+|+ +++.+..++..+.....|.+.+......   
T Consensus       229 ~~a~~~r~~---~~N~~~l~~il~lR~e~A~LLGf~s~A~~~L~~kMA~spe~V~~FL~~L~~~~~p~a~~E~~~L~~~~  305 (665)
T d1i1ip_         229 EMAFHTRCK---QENTAILQQLLPLRAQVAKLLGYNTHADFVLELNTAKSTSRVAAFLDDLSQKLKPLGEAEREFILSLK  305 (665)
T ss_dssp             HHHHTTTTH---HHHHHHHHHHHHHHHHHHHHHTCSSHHHHHHTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCC---CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             998732242---02679999999999989986388979999887650376788999999999971444699999999998


Q ss_pred             -HHC------CCCCCCHHHHHHCCC-----------CCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHH------------
Q ss_conf             -870------887531234440256-----------5547779989999999986666-328999999------------
Q gi|254780915|r  318 -KWL------KLDTMYFWDRLAPLP-----------GTSQDIIPFEVARDLVLQSYAK-FSPQMSIIA------------  366 (626)
Q Consensus       318 -~~l------g~~~l~~wD~~~~~~-----------~~~~~~~~~ee~~~~v~~~~~~-~~~e~~~~~------------  366 (626)
                       +..      +.++|.|||+.++..           .+..++||.+.+.+++...+.. ||..+.+..            
T Consensus       306 ~~~~~~~~~~~~~~l~pWD~~Yy~~k~r~~~~~~d~~~l~~YFpl~~vl~gl~~l~~~Lfgi~~~~~~~~~~wh~dV~~~  385 (665)
T d1i1ip_         306 KKECEERGFEYDGKINAWDLHYYMTQTEELKYSVDQESLKEYFPIEVVTEGLLSIYQELLGLSFEQVPDAHVWNKSVSLY  385 (665)
T ss_dssp             HHHHHTTTCCCCSSCCHHHHHHHHHHHHHHHSCCCHHHHGGGCBHHHHHHHHHHHHHHHHTEEEEECTTCCCSSTTCEEE
T ss_pred             HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEE
T ss_conf             77655337776566673317888888776421233101245563788999999999998500345555677760402699


Q ss_pred             -------HHHHHCCCCCHHCCCCCCCCCCCCCCCCC----------CCCEEECCCCC---------CHHHHHHHHHHHHH
Q ss_conf             -------98642485020103799874354766677----------75101036533---------24679999998458
Q gi|254780915|r  367 -------EKFFTHNWIDAPQYDGKGSGAFAHGTIPS----------VHPYILLNYLG---------KPQDVMTLAHELGH  420 (626)
Q Consensus       367 -------~~~~~~~~iD~~~r~gKr~GA~~~~~~~~----------~~~~I~~N~~~---------~~~dv~TL~HE~GH  420 (626)
                             ...++..|+|+|+|+||++||||++++++          +.+.++|||+.         ++++|+||||||||
T Consensus       386 ~v~d~~~~~~lG~~YlDl~~R~~K~~~a~~~~~~~~~~~~~~~~q~P~~~lv~Nf~~p~~~~p~lls~~ev~TLFHEfGH  465 (665)
T d1i1ip_         386 TVKDKATGEVLGQFYLDLYPREGKYNHAACFGLQPGCLLPDGSRMMSVAALVVNFSQPVAGRPSLLRHDEVRTYFHEFGH  465 (665)
T ss_dssp             EEEETTTCCEEEEEEEECSCCTTSCCSCEEEEEECCCBCTTSCBCCEEEEEECCCCCCCTTSCCBCCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             99842564404568776266854467786764025732356565531677752036898999774445668646988899


Q ss_pred             HHHHHHHC-CCCCCCCCCCHHHHHHHHHHHHHHHHH----------HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999612-568776578005999886888999999----------9984138998999999999862069999999999
Q gi|254780915|r  421 GIHFVLSS-ETQGILTNNSSLTLAETASIFGETLTF----------DSLLQAASSKEERKILLANKIEDMLNSIVRQISF  489 (626)
Q Consensus       421 a~H~~ls~-~~~~~~~~~~~~~~aE~~S~~~E~~~~----------~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~q~~~  489 (626)
                      |+|+++++ +++.++|+++++||||+|||+||+|||          ||.+++++|+++..+++..+.++.+..+.+|+.+
T Consensus       466 alH~lls~~~y~~lsGt~v~~DfvE~pSql~E~~~~~~~vL~~~a~h~~tge~lp~~l~~~~~~~~~~~~~~~~~~ql~~  545 (665)
T d1i1ip_         466 VMHQICAQTDFARFSGTNVETDFVEVPSQMLENWVWDVDSLRKLSKHYKDGHPITDELLEKLVASRLVNTGLLTLRQIVL  545 (665)
T ss_dssp             HHHHHHCCCSSGGGSTTCSCTTTTHHHHHHHHGGGGCHHHHHHHCCCTTTCCCCCHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred             HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99886415565645566652565555689998720788999854136667766889999989877558789999999999


Q ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCC-CCCCCHHHHHHHHHHHHHHHHH-
Q ss_conf             99999997212016899989999999999998607763458878885001525410-6675258999999999999999-
Q gi|254780915|r  490 YDFELKLHTERRSTGDIPTHRINEIWLETQKESLGPAFDLSDLEYGSFWMMVPHFI-ESSFYVYAYAFGNCLVNSLYDI-  567 (626)
Q Consensus       490 ~~fe~~~h~~~~~~~~~t~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~w~~~~H~y-~~~fY~y~Y~~~~~~a~~l~~~-  567 (626)
                      +.||+.+|+..    +..   ..+.|.++.+++.|.    +......++++|+|++ +++--||+|.|++++|+++|.. 
T Consensus       546 a~~D~~lH~~~----~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~F~Hl~~gY~A~YYsYlws~vlaad~~~~~  614 (665)
T d1i1ip_         546 SKVDQSLHTNA----TLD---AASEYAKYCTEILGV----AATPGTNMPATFGHLAGGYDGQYYGYLWSEVFSMDMFHSC  614 (665)
T ss_dssp             HHHHHHTTTCS----SCC---HHHHHHHHHHHHTSS----CCCTTCCGGGGCTTTSSSCTTCTTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHCCC----CCC---HHHHHHHHHHHHCCC----CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             99899984789----864---689999999985289----9999988888583012795415299999999999999999


Q ss_pred             HHHCC--CHHHHHHHHH-HHHCCCCCCHHHHHHHC-CCCCCCHHHHHH
Q ss_conf             99567--3328999999-98326999979999970-889899889999
Q gi|254780915|r  568 YKSNT--VDCFKEKYLN-ILRAGNSKHYSELLLPL-NINLSDPNFWER  611 (626)
Q Consensus       568 ~~~~~--~~~~~~~y~~-~L~~Ggs~~~~el~k~~-G~d~~~~~~~~~  611 (626)
                      |+++|  +++.+++|++ ||+.|||++|.++++.| |.+++...|++.
T Consensus       615 f~~~~~~n~~~G~~~r~~iL~~Ggs~~~~~~~~~f~GR~p~~~a~l~~  662 (665)
T d1i1ip_         615 FKKEGIMNPEVGMKYRNLILKPGGSLDGMDMLQNFLQREPNQKAFLMS  662 (665)
T ss_dssp             HHHHCTTCHHHHHHHHHHTTTTTTSSCHHHHHHHHHSSCCCSHHHHHH
T ss_pred             HHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHH
T ss_conf             976799999999999998610669846999999854999983799986


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Neurolysin-like
domain: Neurolysin (endopeptidase 24.16, thimet oligopeptidase)
species: Rat (Rattus norvegicus) [TaxId: 10116]