PSIBLAST alignment of GI: 254780915 and protein with PDB id: 1s4b
>gi|51247327|pdb|1S4B|P Chain P, Crystal Structure Of Human Thimet Oligopeptidase Length = 674
Score = 166 bits (420), Expect = 1e-38, Method: Composition-based stats.
Identities = 85/675 (12%), Positives = 176/675 (26%), Gaps = 130/675 (19%)
Query: 38 RWNLEDLYPSHDSQEISNDMECIEHESLAFKTRWEGNLAHATNQKNCHSLGAAIAEYERI 97
RW+L +Q+I E K ++ + S A+A+ E
Sbjct: 10 RWDLS-------AQQIE---ERTRELIEQTKRVYDQVGTQEFEDVSYESTLKALADVEVT 59
Query: 98 CELIGRIASY---AMLSYNCNLSSPTIRKFYTDINAKLA---DFEKVLIFFALEINTLD- 150
+ I + S + +S K ++ + +++ D + +++ ++
Sbjct: 60 YTVQRNILDFPQHVSPSKDIRTASTEADKKLSEFDVEMSMREDVYQRIVWLQEKVQKDSL 119
Query: 151 ----EALLEQSY------------AQDPLTLKYSAWIKNIRKIKKHLLSNDMECLLSDTS 194
LE+ + + + L+ D L
Sbjct: 120 RPEAARYLERLIKLGRRNGLHLPRETQENIKRIKKKLSLLCIDFNKNLNEDTTFLPFTLQ 179
Query: 195 QVGREALKRFFCENIESLRFKINDQKIPLTKAYKSFFDSDREVRKSAAKALSHTFNKSSH 254
++G K P E R+ +A + +
Sbjct: 180 ELGGLPEDFLNSLEKMEDGKLKVTLKYPH-YFPLLKKCHVPETRRKVEEAFNSRCKE--- 235
Query: 255 IFSFITNTLAKDEEIQDRWRKYEKIADSRHLSNNVEP-YVIEALMQSVKNYYPKTSHRYY 313
S I L + R + AD N + + + + +
Sbjct: 236 ENSAILKELVTLRAQKSRLLGFHTHADYVLEMNMAKTSQTVATFLDELAQKLKPLGEQER 295
Query: 314 ELKKKWLKLD----------TMYFWDRLAPL--PGTSQDIIPFEVARDL-----VLQSYA 356
+ + + + + WD + ++ + + ++ V
Sbjct: 296 AVILELKRAECERRGLPFDGRIRAWDMRYYMNQVEETRYCVDQNLLKEYFPVQVVTHGLL 355
Query: 357 KFSPQMSIIA------------------------EKFFTHNWIDAPQYDGKGSGAFAHGT 392
++ +A + ++D +GK A G
Sbjct: 356 GIYQELLGLAFHHEEGASAWHEDVRLYTARDAASGEVVGKFYLDLYPREGKYGHAACFGL 415
Query: 393 IPS-------------------VHPYILLNYLGKPQDVMTLAHELGHGIHFVLSS-ETQG 432
P P L + +V T HE GH +H + S E
Sbjct: 416 QPGCLRQDGSRQIAIAAMVANFTKPTADAPSLLQHDEVETYFHEFGHVMHQLCSQAEFAM 475
Query: 433 ILTNNSSLTLAETASIFGETLTF----------DSLLQAASSKEERKILLANKIEDMLNS 482
+ E S E + +A +E + L+ ++ +
Sbjct: 476 FSGTHVERDFVEAPSQMLENWVWEQEPLLRMSRHYRTGSAVPRELLEKLIESRQANTGLF 535
Query: 483 IVRQISFYDFELKLHTERRSTGDIPTHRINEIWLETQKESLGPAFDLSDLEYGSFWMMVP 542
+RQI + LHT+ + E + +E LG + +
Sbjct: 536 NLRQIVLAKVDQALHTQTDADPA-------EEYARLCQEILG----VPATPGTNMPATFG 584
Query: 543 HFIESSFY---VYAYAFGNCLVNSLYD-IYKSNT--VDCFKEKYLN-ILRAGNSKHYSEL 595
H + Y Y Y + ++ +K Y + ILR G S+ S +
Sbjct: 585 HL--AGGYDAQYYGYLWSEVYSMDMFHTRFKQEGVLNSKVGMDYRSCILRPGGSEDASAM 642
Query: 596 LLPL-NINLSDPNFW 609
L + F
Sbjct: 643 LRRFLGRDPKQDAFL 657