RPSBLAST alignment for GI: 254780915 and conserved domain: TIGR02290
>gnl|CDD|162797 TIGR02290, M3_fam_3, oligoendopeptidase, pepF/M3 family. The M3 family of metallopeptidases contains several distinct clades. Oligoendopeptidase F as characterized in Lactococcus, the functionally equivalent oligoendopeptidase B of group B Streptococcus, and closely related sequences are described by TIGR00181. The present family is quite similar but forms a distinct clade, and a number of species have one member of each. A greater sequence difference separates members of TIGR02289, probable oligoendopeptidases of the M3 family that probably should not be designated PepF. Length = 587
Score = 509 bits (1314), Expect = e-145
Identities = 213/598 (35%), Positives = 324/598 (54%), Gaps = 20/598 (3%)
Query: 38 RWNLEDLYPSHDSQEISNDMECIEHESLAFKTRWEGNLAHATNQKNCHSLGAAIAEYERI 97
W+L DLYP S E D++ I+ + F++ ++ L + K L A+ YE +
Sbjct: 1 EWDLSDLYPGGSSPEFEEDLKKIKALADEFESLYQEKLT-PLDAKGKEKLQNALKRYEAL 59
Query: 98 CELIGRIASYAMLSYNCNLSSPTIRKFYTDINAKLADFEKVLIFFALEINTLDE----AL 153
EL+ ++ +YA L Y+ + S P + ++ A ++ ++ L+FF LE+ L + AL
Sbjct: 60 GELLSKVGAYASLLYSADTSDPEAKALLGELEALSSEIQQALLFFTLELMRLSDEVWAAL 119
Query: 154 LEQSYAQDPLTLKYSAWIKNIRKIKKHLLSNDMECLLSDTSQVGREALKRFFCENIESLR 213
L Y ++K +RK H LS + E L++ S GR A R + E +LR
Sbjct: 120 LSDPDLAP-----YRFYLKELRKEAPHTLSEEEEKLINALSLTGRAAWSRLYDELTGTLR 174
Query: 214 FKIN-----DQKIPLTKAYKSFFDSDREVRKSAAKALSHTFNKSSHIFSFITNTLAKDEE 268
++ ++ + L +A D D EVRK A KAL + K++ + I N LA D
Sbjct: 175 IPVDGKDGEEETLSLEQALNLLRDPDAEVRKKAFKALLKAWEKNAPTLAAILNALAGDRL 234
Query: 269 IQDRWRKYEKIADSRHLSNNVEPYVIEALMQSVKNYYPKTSHRYYELKKKWLKLDTMYFW 328
+ R R Y+ + R L N ++ ++A+++++K YP RYY+LK K L + + F+
Sbjct: 235 TEYRLRGYDHPLEPRLLYNRIDQETLDAMLEAIKENYP-LFRRYYKLKAKLLGKEKLDFY 293
Query: 329 DRLAPLPGTSQDIIPFEVARDLVLQSYAKFSPQMSIIAEKFFTHNWIDAPQYDGKGSGAF 388
D APL +S F+ A++LVL+++ KFSP+M+ AEK F WIDA GK GAF
Sbjct: 294 DLYAPLGDSSAKTYTFDEAKELVLEAFGKFSPEMADFAEKAFEEGWIDAEPRPGKRGGAF 353
Query: 389 AHGTIPSVHPYILLNYLGKPQDVMTLAHELGHGIHFVLSSETQGILTNNSSLTLAETASI 448
G PS P +L+NY G +DV TLAHELGH H L+ + Q +L +TLAETASI
Sbjct: 354 CTGFPPSKEPRVLMNYDGSRRDVSTLAHELGHAYHSELAKD-QPLLNARYPMTLAETASI 412
Query: 449 FGETLTFDSLLQAASSKEERKILLANKIEDMLNSIVRQISFYDFELKLHTERRSTGDIPT 508
F E L FD+LL+ A + EE+ LLA K+ED + ++VR + + FE + H E R G++
Sbjct: 413 FAEMLLFDALLKEAKTDEEKLSLLAEKLEDAIATLVRIHARFLFERRFH-EARKEGELSA 471
Query: 509 HRINEIWLETQKESLGPAFDLSDLEYGSFWMMVPHFIESSFYVYAYAFGNCLVNSLYDIY 568
I ++ LE QKES G A D S+L + W PHF + FY Y Y FG V LY Y
Sbjct: 472 DDICDLMLEAQKESYGDALDESEL-HPYMWAYKPHFYHAPFYNYPYTFGYLFVLGLYAKY 530
Query: 569 KSNTVDCFKEKYLNILRAGNSKHYSELLLPLNINLSDPNFWERGLQTVEKMIDDVEKM 626
+ F KY+ +LR S EL+ +L+ P+FW++G+ +E+ ID+ E++
Sbjct: 531 REEGES-FVPKYIALLRDTGSMTPEELVKKFGFDLTSPDFWQKGIDVIEEKIDEFEEL 587