HHsearch alignment for GI: 254780916 and conserved domain: CHL00195

>CHL00195 ycf46 Ycf46; Provisional.
Probab=99.07  E-value=4e-10  Score=91.15  Aligned_cols=184  Identities=14%  Similarity=0.207  Sum_probs=113.5

Q ss_pred             CCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC---CCCCCCEEE
Q ss_conf             32048873277743679999998426754332101234655421002433112555532211100123---446671475
Q gi|254780916|r  162 CAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFGDVDLQTKNSAQFLGKF---IEANGGTIV  238 (482)
Q Consensus       162 ~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~~~~~e~~lFG~~~~~~~~~~~~~g~~---~~a~~Gtl~  238 (482)
T Consensus       258 ~PkGvLL~GpPG~GKtl~AKAvA~e~---~~p~l~l~~~~l-----~~~~vGesE------~~~r~~f~~A~~~aP~ilf  323 (491)
T CHL00195        258 TPRGLLLVGIQGTGKSLTAKAIANEW---NLPLLRLDVGKL-----FGGIVGESE------SRMRQMIQLAETISPCILW  323 (491)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHH---CCCEEEEEHHHH-----HHHHCCHHH------HHHHHHHHHHHHHCCEEEE
T ss_conf             99879997999987899999998663---894699667997-----560067049------9999999999861985899


Q ss_pred             ECCCCHH-H-----------HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC---CCCCCCHHHHHHHHHHHHH
Q ss_conf             1664200-1-----------88999888877642001123553212343156521433---2111111233379998865
Q gi|254780916|r  239 LEEPDAL-P-----------LAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKN---LLPQVKSHVFRKDLYYRIS  303 (482)
Q Consensus       239 l~ei~~L-~-----------~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~~---L~~~~~~g~fr~dLy~rL~  303 (482)
T Consensus       324 iDEidk~~~~~~~~~d~g~s~rv~~~~Lt~m~e-----------~~~~VfViattN~~~~L~pellR~GRFD~~~~----  388 (491)
T CHL00195        324 IDEIDKAFSGLDSKGDSGTSNRVLATFITWLSE-----------KKSPVFVVATANNIDSLPLELLRKGRFDEIFF----  388 (491)
T ss_pred             EEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC-----------CCCCEEEEEECCCCCCCCHHHCCCCCCCEEEE----
T ss_conf             746545425888888872328999999998646-----------89976999958997558987708987770476----


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--HCCCCCCCHHH
Q ss_conf             4334467787744222255667776410112233332111110001223389868999999999987--43898106889
Q gi|254780916|r  304 VFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQELKNILLRAVI--GLKDSHLTEDR  381 (482)
Q Consensus       304 ~~~i~iPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y~WPGNvREL~n~i~r~~i--~~~~~~i~~~~  381 (482)
T Consensus       389 ---v~lP~~~~R~~----I~~ihl~~~~~~---~~~~~d~~~la~-~t~gfsG--AeIe~~v~~A~~~A~~~~r~~~~~d  455 (491)
T CHL00195        389 ---LDLPNLEEREL----IFKIHLKRFRPN---SWQNYDIEILSQ-LTNKFSG--AEIEQSIIEAMHHAFSEKREFTTED  455 (491)
T ss_pred             ---CCCCCHHHHHH----HHHHHHHCCCCC---CCCCCCHHHHHH-HCCCCCH--HHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf             ---48959899999----999998544788---755469999997-6859888--9999999999999987588665899


Q ss_pred             HHHHHC
Q ss_conf             545421
Q gi|254780916|r  382 FVLLLS  387 (482)
Q Consensus       382 ~~~~l~  387 (482)
T Consensus       456 l~~a~~  461 (491)
T CHL00195        456 ICLALK  461 (491)
T ss_pred             HHHHHH
T ss_conf             999998