HHsearch alignment for GI: 254780916 and conserved domain: COG0593

>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].
Probab=98.20  E-value=2.9e-06  Score=63.92  Aligned_cols=221  Identities=17%  Similarity=0.172  Sum_probs=128.0

Q ss_pred             CCCCCCCCCCCCC-CCCCCCCCCCCCCCCCC----CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCC--CCCCCCCCCCC
Q ss_conf             2222111111112-22222222222222234----43204887327774367999999842675433--21012346554
Q gi|254780916|r  131 SQENEHCALDSLI-AVSPAMIQVVDLARKAG----DCAIPIMIQGEFGVGKKRLSRFIHESGKRAFF--PFFIVNCGMID  203 (482)
Q Consensus       131 ~~~~~~~~~~~Li-G~S~~m~~v~~~i~~~a----~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~--~fi~v~c~~~~  203 (482)
T Consensus        78 ~~l~~~ytFdnFv~g~~N--~~A~aa~~~va~~~g~~~nplfi~G~~GlGKTHLl~Aign~~~~~~~~a~v~y~~se~f~  155 (408)
T COG0593          78 SGLNPKYTFDNFVVGPSN--RLAYAAAKAVAENPGGAYNPLFIYGGVGLGKTHLLQAIGNEALANGPNARVVYLTSEDFT  155 (408)
T ss_pred             CCCCCCCCHHHEEECCCH--HHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHH
T ss_conf             568988855422047744--999999999875668868957998799997899999999999862998648850489989


Q ss_pred             CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHH--HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC
Q ss_conf             210024331125555322111001234466714751664200188--999888877642001123553212343156521
Q gi|254780916|r  204 QDKIEKFLFGDVDLQTKNSAQFLGKFIEANGGTIVLEEPDALPLA--VQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLT  281 (482)
Q Consensus       204 ~~~~e~~lFG~~~~~~~~~~~~~g~~~~a~~Gtl~l~ei~~L~~~--~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t  281 (482)
T Consensus       156 ~~~v~a~~~-------~~~~~Fk~~y---~~dlllIDDiq~l~gk~~~qeefFh~FN~l~-----~~-----~kqIvlts  215 (408)
T COG0593         156 NDFVKALRD-------NEMEKFKEKY---SLDLLLIDDIQFLAGKERTQEEFFHTFNALL-----EN-----GKQIVLTS  215 (408)
T ss_pred             HHHHHHHHH-------HHHHHHHHHH---CCCEEEECHHHHHCCCHHHHHHHHHHHHHHH-----HC-----CCEEEEEC
T ss_conf             999999885-------0488888764---2673555138675677157999999999888-----50-----88799970


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHH-HH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             4332111111233379998865-43--34467787744222255667776410112233332111110001223389868
Q gi|254780916|r  282 EKNLLPQVKSHVFRKDLYYRIS-VF--LINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNV  358 (482)
Q Consensus       282 ~~~L~~~~~~g~fr~dLy~rL~-~~--~i~iPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y~WPGNv  358 (482)
T Consensus       216 dr~P~~l~---~~~~rL~SR~~~Gl~~~I~~Pd~e~r~ai--------L~kka~~~~---~~i~~ev~~~la-~~~~~nv  280 (408)
T COG0593         216 DRPPKELN---GLEDRLRSRLEWGLVVEIEPPDDETRLAI--------LRKKAEDRG---IEIPDEVLEFLA-KRLDRNV  280 (408)
T ss_pred             CCCCHHHC---CCCHHHHHHHHCEEEEEECCCCHHHHHHH--------HHHHHHHCC---CCCCHHHHHHHH-HHHHCCH
T ss_conf             78832211---03588998986305775279888999999--------999998658---888879999999-9700309


Q ss_pred             HHHHHHHHHHHHH--CCCCCCCHHHHHHHHCC
Q ss_conf             9999999999874--38981068895454212
Q gi|254780916|r  359 QELKNILLRAVIG--LKDSHLTEDRFVLLLSR  388 (482)
Q Consensus       359 REL~n~i~r~~i~--~~~~~i~~~~~~~~l~~  388 (482)
T Consensus       281 ReLegaL~~l~~~a~~~~~~iTi~~v~e~L~~  312 (408)
T COG0593         281 RELEGALNRLDAFALFTKRAITIDLVKEILKD  312 (408)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf             99999999999999853875769999999998