HHsearch alignment for GI: 254780916 and conserved domain: COG1224

>COG1224 TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription].

Probab=94.29  E-value=0.12  Score=31.40  Aligned_cols=68  Identities=22%  Similarity=0.230  Sum_probs=48.2

Q ss_pred             CCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             211111111222222---222222222234432048873277743679999998426754332101234655
Q gi|254780916|r  134 NEHCALDSLIAVSPA---MIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMI  202 (482)
Q Consensus       134 ~~~~~~~~LiG~S~~---m~~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~  202 (482)
T Consensus        33 ~~k~~~dG~VGQ~~AReAaGvIv~mik~gk~aGrgiLi~GppgTGKTAlA~gIa~eL-G~dvPF~~isgsEi  103 (450)
T COG1224          33 KAKFIGDGLVGQEEAREAAGVIVKMIKQGKMAGRGILIVGPPGTGKTALAMGIAREL-GEDVPFVAISGSEI  103 (450)
T ss_pred             CEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHH-CCCCCCEEECCCEE
T ss_conf             874768861124988876259999997176666179997899976889999999985-89998215013322