HHsearch alignment for GI: 254780916 and conserved domain: COG2812

>COG2812 DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair].
Probab=97.16  E-value=0.0015  Score=44.75  Aligned_cols=212  Identities=17%  Similarity=0.226  Sum_probs=118.1

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCC----CCCCCCCC-CCCCCCCCC----
Q ss_conf             111111112222222222222222344320488732777436799999984267----54332101-234655421----
Q gi|254780916|r  135 EHCALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGK----RAFFPFFI-VNCGMIDQD----  205 (482)
Q Consensus       135 ~~~~~~~LiG~S~~m~~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~----r~~~~fi~-v~c~~~~~~----  205 (482)
T Consensus        11 RP~~F~evvGQe~v~~~L~nal~-~~ri~hAYlfsG~RGvGKTt~Ari~AkalNC~~~~~~ePC~~C~~Ck~I~~g~~~D   89 (515)
T COG2812          11 RPKTFDDVVGQEHVVKTLSNALE-NGRIAHAYLFSGPRGVGKTTIARILAKALNCENGPTAEPCGKCISCKEINEGSLID   89 (515)
T ss_pred             CCCCHHHHCCCHHHHHHHHHHHH-HCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf             83007776364899999999998-08423336513777767104999999995688987777225316668651488641


Q ss_pred             CCHHHHHCCCCC-CCCCCCCCCCCCC-------CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
Q ss_conf             002433112555-5322111001234-------46671475166420018899988887764200112355321234315
Q gi|254780916|r  206 KIEKFLFGDVDL-QTKNSAQFLGKFI-------EANGGTIVLEEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRL  277 (482)
Q Consensus       206 ~~e~~lFG~~~~-~~~~~~~~~g~~~-------~a~~Gtl~l~ei~~L~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~Ri  277 (482)
T Consensus        90 viE------iDaASn~gVddiR~i~e~v~y~P~~~ryKVyiIDEvHMLS~~afNALLKTLEEP-----------P~hV~F  152 (515)
T COG2812          90 VIE------IDAASNTGVDDIREIIEKVNYAPSEGRYKVYIIDEVHMLSKQAFNALLKTLEEP-----------PSHVKF  152 (515)
T ss_pred             CHH------HHHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCC-----------CCCEEE
T ss_conf             011------364445486799999987246886666418998318764378888875111368-----------667489


Q ss_pred             EEECCCCC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             65214332----11111123337999886543344677877442222556677764101122333321111100012233
Q gi|254780916|r  278 IFLTEKNL----LPQVKSHVFRKDLYYRISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYP  353 (482)
Q Consensus       278 Ia~t~~~L----~~~~~~g~fr~dLy~rL~~~~i~iPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y~  353 (482)
T Consensus       153 IlATTe~~Kip~TIlSRcq~f------~fkri~---------~~~I~~~----L~~i~~~E~---I~~e~~aL~~ia~-~  209 (515)
T COG2812         153 ILATTEPQKIPNTILSRCQRF------DFKRLD---------LEEIAKH----LAAILDKEG---INIEEDALSLIAR-A  209 (515)
T ss_pred             EEECCCCCCCCHHHHHCCCCC------CCCCCC---------HHHHHHH----HHHHHHHCC---CCCCHHHHHHHHH-H
T ss_conf             985388676840455212202------225799---------9999999----999987448---7547999999999-8


Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
Q ss_conf             89868999999999987438981068895454212
Q gi|254780916|r  354 WIDNVQELKNILLRAVIGLKDSHLTEDRFVLLLSR  388 (482)
Q Consensus       354 WPGNvREL~n~i~r~~i~~~~~~i~~~~~~~~l~~  388 (482)
T Consensus       210 a~Gs~RDalslLDq~i~~~~-~~It~~~v~~~lG~  243 (515)
T COG2812         210 AEGSLRDALSLLDQAIAFGE-GEITLESVRDMLGL  243 (515)
T ss_pred             CCCCHHHHHHHHHHHHHCCC-CCCCHHHHHHHHCC
T ss_conf             28974567778999997067-76569999999688