HHsearch alignment for GI: 254780916 and conserved domain: COG3267
>COG3267 ExeA Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion].
Probab=97.21 E-value=0.00079 Score=46.70 Aligned_cols=206 Identities=16% Similarity=0.195 Sum_probs=112.1
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCC---CC---CCCCCCCCCCCCC
Q ss_conf 34432048873277743679999998426754332101234655421002433112555---53---2211100123446
Q gi|254780916|r 159 AGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFGDVDL---QT---KNSAQFLGKFIEA 232 (482)
Q Consensus 159 ~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~~~~~e~~lFG~~~~---~~---~~~~~~~g~~~~a 232 (482)
T Consensus 47 i~d~qg~~~vtGevGsGKTv~~Ral~~s~~~d~~~~v~i~~~~~s~~~~~~ai~~~l~~~p~~~~~~~~e~~~~~L~al~ 126 (269)
T COG3267 47 IADGQGILAVTGEVGSGKTVLRRALLASLNEDQVAVVVIDKPTLSDATLLEAIVADLESQPKVNVNAVLEQIDRELAALV 126 (269)
T ss_pred HHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 75178559997447776369999999855788517998357630178899999998405832006889999999999999
Q ss_pred CC----CEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 67----14751664200188999888877642001123553212343156521433211111123337999886543344
Q gi|254780916|r 233 NG----GTIVLEEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLYYRISVFLIN 308 (482)
Q Consensus 233 ~~----Gtl~l~ei~~L~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~~L~~~~~~g~fr~dLy~rL~~~~i~ 308 (482)
T Consensus 127 ~~g~r~v~l~vdEah~L~~~~-le~Lrll~nl~~---~~~~~----l~ivL~Gqp~L~~~lr~~~l~e-~~~R~~-ir~~ 196 (269)
T COG3267 127 KKGKRPVVLMVDEAHDLNDSA-LEALRLLTNLEE---DSSKL----LSIVLIGQPKLRPRLRLPVLRE-LEQRID-IRIE 196 (269)
T ss_pred HHCCCCEEEEEHHHHHHCHHH-HHHHHHHHHHCC---CCCCC----EEEEECCCCCCCHHHCHHHHHH-HHHEEE-EEEE
T ss_conf 817887378501676617548-999999886203---46672----1145507801143544288985-431677-8995
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHCCCCCCCHH
Q ss_conf 677877442222556677764101122333321111100012--233898689999999999874389810688
Q gi|254780916|r 309 ISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLT--KYPWIDNVQELKNILLRAVIGLKDSHLTED 380 (482)
Q Consensus 309 iPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~--~y~WPGNvREL~n~i~r~~i~~~~~~i~~~ 380 (482)
T Consensus 197 l~P~~~~--~t~~yl~~~Le~a----~~~~~l~~~~a~~~i~~~sqg~P~lin~~~~~Al~~a~~a~~~~v~~a 264 (269)
T COG3267 197 LPPLTEA--ETGLYLRHRLEGA----GLPEPLFSDDALLLIHEASQGIPRLINNLATLALDAAYSAGEDGVSEA 264 (269)
T ss_pred CCCCCHH--HHHHHHHHHHHCC----CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 3886747--8999999998505----899666770578999998525548999988999999987399751256