HHsearch alignment for GI: 254780916 and conserved domain: COG3284
>COG3284 AcoR Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription].
Probab=100.00 E-value=0 Score=579.14 Aligned_cols=289 Identities=34% Similarity=0.549 Sum_probs=267.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCC-CCCCCC
Q ss_conf 2222222222222222344320488732777436799999984267543321012346554210024331125-555322
Q gi|254780916|r 143 IAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFGDV-DLQTKN 221 (482)
Q Consensus 143 iG~S~~m~~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~~~~~e~~lFG~~-~~~~~~ 221 (482)
T Consensus 316 ~~~d~s~a~l~rk~~rv~~~~~pvll~GEtGtGKe~laraiH~~s~-~~gpfvAvNCaAip~~liesELFGy~~GafTga 394 (606)
T COG3284 316 PLLDPSRATLLRKAERVAATDLPVLLQGETGTGKEVLARAIHQNSE-AAGPFVAVNCAAIPEALIESELFGYVAGAFTGA 394 (606)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCC-CCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCC
T ss_conf 4557889999999988762478768538765568999999985365-569837998503447764677744576564330
Q ss_pred CCC-CCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHH
Q ss_conf 111-0012344667147516642001889998888776420011235532123431565214332111111233379998
Q gi|254780916|r 222 SAQ-FLGKFIEANGGTIVLEEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLYY 300 (482)
Q Consensus 222 ~~~-~~g~~~~a~~Gtl~l~ei~~L~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~~L~~~~~~g~fr~dLy~ 300 (482)
T Consensus 395 ~~kG~~g~~~~A~gGtlFldeIgd~p~~~Qs~LLrVl~e~~v~p~g~~~-~~vdirvi~ath~dl~~lv~~g~fredLyy 473 (606)
T COG3284 395 RRKGYKGKLEQADGGTLFLDEIGDMPLALQSRLLRVLQEGVVTPLGGTR-IKVDIRVIAATHRDLAQLVEQGRFREDLYY 473 (606)
T ss_pred HHCCCCCCCEECCCCCCHHHHHHHCHHHHHHHHHHHHHHCCEECCCCCC-EEEEEEEEECCCCCHHHHHHCCCCHHHHHH
T ss_conf 0106655410157876089876114189999999998618252358852-157799983467579999875971487888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH
Q ss_conf 86543344677877442222556677764101122333321111100012233898689999999999874389810688
Q gi|254780916|r 301 RISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQELKNILLRAVIGLKDSHLTED 380 (482)
Q Consensus 301 rL~~~~i~iPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y~WPGNvREL~n~i~r~~i~~~~~~i~~~ 380 (482)
T Consensus 474 rL~~~~i~lP~lr~R~d~~~~l~~~~~~~-~~----~~~~l~~~~~~~l~~~~WPGNirel~~v~~~~~~l~~~g~~~~~ 548 (606)
T COG3284 474 RLNAFVITLPPLRERSDRIPLLDRILKRE-ND----WRLQLDDDALARLLAYRWPGNIRELDNVIERLAALSDGGRIRVS 548 (606)
T ss_pred HHCCEEECCCCHHCCCCCHHHHHHHHHHC-CC----CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEECC
T ss_conf 74471550686110466578999999872-68----77568999999998578998289999999999870799735714
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 95454212445432234322222233444321000000001123444543258999999999999999828727899978
Q gi|254780916|r 381 RFVLLLSREGKKEREFHTETACTCYTEGKSSDTILDNLSQESIPAIGQDGEVRRLSDIEKEIIGLAMKLYRAQMSEVARR 460 (482)
Q Consensus 381 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~E~~~I~~aL~~~~Gn~~~aA~~ 460 (482)
T Consensus 549 dlp~~l~~~~~~-----------------------------------------~~~~~~~~~l~~al~~~~~~is~aa~~ 587 (606)
T COG3284 549 DLPPELLEEQAT-----------------------------------------PREDIEKAALLAALQATNGNISEAARL 587 (606)
T ss_pred CCCHHHHHHHCC-----------------------------------------CCCCHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 498888754325-----------------------------------------300157999999999808979999998
Q ss_pred HCCCHHHHHHHHHHHCCCC
Q ss_conf 4899889999999818881
Q gi|254780916|r 461 LGIGRSTLYRKIREYNIEV 479 (482)
Q Consensus 461 LGIsR~tL~rKlk~~gi~~ 479 (482)
T Consensus 588 lgi~R~T~yrklk~~gi~~ 606 (606)
T COG3284 588 LGISRSTLYRKLKRHGISK 606 (606)
T ss_pred HCCCHHHHHHHHHHHCCCC
T ss_conf 5997888999999737789