HHsearch alignment for GI: 254780916 and conserved domain: KOG0734
>KOG0734 consensus.
Probab=98.11 E-value=9.1e-06 Score=60.39 Aligned_cols=210 Identities=17% Similarity=0.258 Sum_probs=116.6
Q ss_pred CCCCCCCCCCCCCCCC---CCCCCCCC------CCC-CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 2111111112222222---22222222------234-4320488732777436799999984267543321012346554
Q gi|254780916|r 134 NEHCALDSLIAVSPAM---IQVVDLAR------KAG-DCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMID 203 (482)
Q Consensus 134 ~~~~~~~~LiG~S~~m---~~v~~~i~------~~a-~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~ 203 (482)
T Consensus 298 ~~nv~F~dVkG~DEAK~ELeEiVefLkdP~kftrLGGKLPKGVLLvGPPGTGKTlLARAvAGE---A~VPFF~~sGSE-- 372 (752)
T KOG0734 298 MKNVTFEDVKGVDEAKQELEEIVEFLKDPTKFTRLGGKLPKGVLLVGPPGTGKTLLARAVAGE---AGVPFFYASGSE-- 372 (752)
T ss_pred HCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHCC---CCCCEEECCCCC--
T ss_conf 416550021472789999999999860908764314758885387689997556999986055---689747416620--
Q ss_pred CCCCHHHHHCCCCCCCCCCCCCCCCCCCCC---CCEEEECCCCHHH-----HHHH---HHHHHHHHH-HHCCCCCCCCCC
Q ss_conf 210024331125555322111001234466---7147516642001-----8899---988887764-200112355321
Q gi|254780916|r 204 QDKIEKFLFGDVDLQTKNSAQFLGKFIEAN---GGTIVLEEPDALP-----LAVQ---GRIYNFIET-GKIEFFDSRGAI 271 (482)
Q Consensus 204 ~~~~e~~lFG~~~~~~~~~~~~~g~~~~a~---~Gtl~l~ei~~L~-----~~~Q---~~Ll~~l~~-~~~~~~g~~~~~ 271 (482)
T Consensus 373 ---FdEm~VGv-----G-ArRVRdLF~aAk~~APcIIFIDEiDavG~kR~~~~~~y~kqTlNQLLvEmDGF~q---Ne-- 438 (752)
T KOG0734 373 ---FDEMFVGV-----G-ARRVRDLFAAAKARAPCIIFIDEIDAVGGKRNPSDQHYAKQTLNQLLVEMDGFKQ---NE-- 438 (752)
T ss_pred ---HHHHHHCC-----C-HHHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCC---CC--
T ss_conf ---44542201-----4-8999999999873498599972002205667862778999899999998428676---88--
Q ss_pred CCCCEEEEECCCC--C-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 2343156521433--2-111111233379998865433446778774422225566777641011223333211111000
Q gi|254780916|r 272 RLDVRLIFLTEKN--L-LPQVKSHVFRKDLYYRISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSL 348 (482)
Q Consensus 272 ~~~~RiIa~t~~~--L-~~~~~~g~fr~dLy~rL~~~~i~iPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~ 348 (482)
T Consensus 439 --GiIvigATNfpe~LD~AL~RPGRFD~-------~v~Vp~PDv~GR~e-I---L~~yl~ki~~~~-----~VD~~i--- 497 (752)
T KOG0734 439 --GIIVIGATNFPEALDKALTRPGRFDR-------HVTVPLPDVRGRTE-I---LKLYLSKIPLDE-----DVDPKI--- 497 (752)
T ss_pred --CEEEEECCCCHHHHHHHHCCCCCCCE-------EEECCCCCCCCHHH-H---HHHHHHCCCCCC-----CCCHHH---
T ss_conf --66999516874555687348875533-------67468977332899-9---999983487656-----778767---
Q ss_pred CCCCCCCC-CHHHHHHHHHHHHHHC---CCCCCCHHHHHH
Q ss_conf 12233898-6899999999998743---898106889545
Q gi|254780916|r 349 LTKYPWID-NVQELKNILLRAVIGL---KDSHLTEDRFVL 384 (482)
Q Consensus 349 L~~y~WPG-NvREL~n~i~r~~i~~---~~~~i~~~~~~~ 384 (482)
T Consensus 498 -iARGT~GFsGAdLaNlVNqAAlkAa~dga~~VtM~~LE~ 536 (752)
T KOG0734 498 -IARGTPGFSGADLANLVNQAALKAAVDGAEMVTMKHLEF 536 (752)
T ss_pred -HCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
T ss_conf -226889876578998888999999863740110887765