HHsearch alignment for GI: 254780916 and conserved domain: KOG0744
>KOG0744 consensus.
Probab=97.03 E-value=0.0011 Score=45.63 Aligned_cols=87 Identities=16% Similarity=0.219 Sum_probs=52.1
Q ss_pred CCCCCCCEEEEEECCCCCHHHHHHHHHHH------CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 22344320488732777436799999984------267543321012346554210024331125555322111001234
Q gi|254780916|r 157 RKAGDCAIPIMIQGEFGVGKKRLSRFIHE------SGKRAFFPFFIVNCGMIDQDKIEKFLFGDVDLQTKNSAQFLGKFI 230 (482)
Q Consensus 157 ~~~a~~~~~vli~Ge~GtGK~~~A~~iH~------~s~r~~~~fi~v~c~~~~~~~~e~~lFG~~~~~~~~~~~~~g~~~ 230 (482)
T Consensus 171 tnlIt~NRliLlhGPPGTGKTSLCKaLaQkLSIR~~~~y~~~~liEinshsL-----FSKWFsESgKlV~kmF~kI~ELv 245 (423)
T KOG0744 171 TNLITWNRLILLHGPPGTGKTSLCKALAQKLSIRTNDRYYKGQLIEINSHSL-----FSKWFSESGKLVAKMFQKIQELV 245 (423)
T ss_pred CCEEEEEEEEEEECCCCCCHHHHHHHHHHHHEEEECCCCCCCEEEEEEHHHH-----HHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7446641489985799988227999998751465237644406999704678-----89887121138999999999997
Q ss_pred CCCCC--EEEECCCCHHHHH
Q ss_conf 46671--4751664200188
Q gi|254780916|r 231 EANGG--TIVLEEPDALPLA 248 (482)
Q Consensus 231 ~a~~G--tl~l~ei~~L~~~ 248 (482)
T Consensus 246 ~d~~~lVfvLIDEVESLa~a 265 (423)
T KOG0744 246 EDRGNLVFVLIDEVESLAAA 265 (423)
T ss_pred HCCCCEEEEEEHHHHHHHHH
T ss_conf 17896899980787888999