HHsearch alignment for GI: 254780916 and conserved domain: PRK05201
>PRK05201 hslU ATP-dependent protease ATP-binding subunit; Provisional.
Probab=98.26 E-value=2.6e-06 Score=64.24 Aligned_cols=128 Identities=14% Similarity=0.258 Sum_probs=66.6
Q ss_pred CCCEEEECCCCHHH------------HHHHHHHHHHHHHHHCC-CCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
Q ss_conf 67147516642001------------88999888877642001-123553212343156521433211111123337999
Q gi|254780916|r 233 NGGTIVLEEPDALP------------LAVQGRIYNFIETGKIE-FFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLY 299 (482)
Q Consensus 233 ~~Gtl~l~ei~~L~------------~~~Q~~Ll~~l~~~~~~-~~g~~~~~~~~~RiIa~t~~~L~~~~~~g~fr~dLy 299 (482)
T Consensus 248 q~GIVFIDEIDKIa~~~~~~g~DVS~EGVQrdLLpivEGt~V~tK~G--~V~TdhILFIasGAFh---~sKPSDLIPEl~ 322 (442)
T PRK05201 248 QNGIVFIDEIDKIAKRGEGSGPDVSREGVQRDLLPLVEGSTVSTKYG--MVKTDHILFIASGAFH---VAKPSDLIPELQ 322 (442)
T ss_pred HCCCEEECHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC--CCCCCEEEEECCCCCC---CCCCCHHHHHHC
T ss_conf 61704511465653035788989773307888788753885556777--6025503455045001---478202249871
Q ss_pred HHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC-------CHHHHHHH
Q ss_conf 886543344677877442222--------556677764101122333321111100012233898-------68999999
Q gi|254780916|r 300 YRISVFLINISTLRSRSEDIP--------WLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWID-------NVQELKNI 364 (482)
Q Consensus 300 ~rL~~~~i~iPpLReR~eDI~--------~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y~WPG-------NvREL~n~ 364 (482)
T Consensus 323 GRlPv-~v~L~~L~--~~dl~~ILtepknsL~kQy~~Lf~~e-gv~-L~Ft~~Al~~IA~~A~~~n~~~~~iGAR~L~tI 397 (442)
T PRK05201 323 GRFPI-RVELDALT--EEDFVRILTEPKASLIKQYQALLATE-GVT-LEFTDDAIRRIAEIAYQVNEKTENIGARRLHTV 397 (442)
T ss_pred CCCEE-EEECCCCC--HHHHHHHHCCCCHHHHHHHHHHHHHC-CCE-EEECHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 75505-88824499--99999996786157899999998624-967-998479999999999985144766773788999
Q ss_pred HHHHHH
Q ss_conf 999987
Q gi|254780916|r 365 LLRAVI 370 (482)
Q Consensus 365 i~r~~i 370 (482)
T Consensus 398 ~E~vl~ 403 (442)
T PRK05201 398 MEKLLE 403 (442)
T ss_pred HHHHHH
T ss_conf 999989