HHsearch alignment for GI: 254780916 and conserved domain: PRK06674
>PRK06674 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.25 E-value=4.8e-06 Score=62.34 Aligned_cols=211 Identities=15% Similarity=0.235 Sum_probs=112.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC----CCCCCC-CCCCCCCC----CC
Q ss_conf 1111111122222222222222223443204887327774367999999842675----433210-12346554----21
Q gi|254780916|r 135 EHCALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKR----AFFPFF-IVNCGMID----QD 205 (482)
Q Consensus 135 ~~~~~~~LiG~S~~m~~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r----~~~~fi-~v~c~~~~----~~ 205 (482)
T Consensus 11 RP~~F~dvvGQ~~v~~~L~nai~-~~ri~HAyLF~GprGtGKts~Ari~AkaLnC~~~~~~~pC~~C~~C~~i~~g~~~D 89 (563)
T PRK06674 11 RPQKFEDVVGQEHVTKTLQNALL-QEKVSHAYLFSGPRGTGKTSIAKVFAKAVNCEHAPVAEPCNECPSCLGITNGSISD 89 (563)
T ss_pred CCCCHHHHCCHHHHHHHHHHHHH-CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCC
T ss_conf 89976552480999999999998-49965034312899868999999999985799999988776687899985589987
Q ss_pred CCHHHHHCCCCCCCCCCCCCCC------CCC--CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
Q ss_conf 0024331125555322111001------234--46671475166420018899988887764200112355321234315
Q gi|254780916|r 206 KIEKFLFGDVDLQTKNSAQFLG------KFI--EANGGTIVLEEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRL 277 (482)
Q Consensus 206 ~~e~~lFG~~~~~~~~~~~~~g------~~~--~a~~Gtl~l~ei~~L~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~Ri 277 (482)
T Consensus 90 viE------iDaasn~gVd~IR~i~~~v~~~P~~~~yKV~IIDeah~Lt~~A~NALLKtLEEP-----------P~~viF 152 (563)
T PRK06674 90 VLE------IDAASNNGVDEIRDIRDKVKFAPSAVEYKVYIIDEVHMLSIGAFNALLKTLEEP-----------PGHVIF 152 (563)
T ss_pred EEE------ECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECHHHCCHHHHHHHHHHHHCC-----------CCCEEE
T ss_conf 798------525555787999999998264886787379998545637999999999986388-----------756499
Q ss_pred EEECCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 652143321111-----112333799988654334467787744222255667776410112233332111110001223
Q gi|254780916|r 278 IFLTEKNLLPQV-----KSHVFRKDLYYRISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKY 352 (482)
Q Consensus 278 Ia~t~~~L~~~~-----~~g~fr~dLy~rL~~~~i~iPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y 352 (482)
T Consensus 153 ILaTtep-~ki~~TI~SRCQrf~---F-----~ri~~-------~~---i~~r-L~~I~~~E~i---~~~~~aL~~Ia~~ 209 (563)
T PRK06674 153 ILATTEP-HKIPPTIISRCQRFD---F-----RRISV-------ND---IVER-LSTVVTNEGT---QVEDEALQIIARA 209 (563)
T ss_pred EEECCCH-HHCCHHHHHHHEEEE---C-----CCCCH-------HH---HHHH-HHHHHHHCCC---CCCHHHHHHHHHH
T ss_conf 9965994-758478873310312---7-----88999-------99---9999-9999998499---9878899999997
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
Q ss_conf 389868999999999987438981068895454212
Q gi|254780916|r 353 PWIDNVQELKNILLRAVIGLKDSHLTEDRFVLLLSR 388 (482)
Q Consensus 353 ~WPGNvREL~n~i~r~~i~~~~~~i~~~~~~~~l~~ 388 (482)
T Consensus 210 a-~GsmRDAlsiLdQ~~s~~-~~~i~~~~v~~~lG~ 243 (563)
T PRK06674 210 A-DGGMRDALSLLDQAISFS-DERVTTEDVLAVTGA 243 (563)
T ss_pred C-CCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHCC
T ss_conf 6-997889999999999715-997689999998689