HHsearch alignment for GI: 254780916 and conserved domain: PRK07261
>PRK07261 topology modulation protein; Provisional.
Probab=93.25 E-value=0.079 Score=32.55 Aligned_cols=33 Identities=30% Similarity=0.470 Sum_probs=26.4
Q ss_pred EEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 048873277743679999998426754332101234
Q gi|254780916|r 164 IPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNC 199 (482)
Q Consensus 164 ~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c 199 (482)
T Consensus 1 MrI~IiG~sGsGKSTlAr~L~~~---~~ip~~~LD~ 33 (171)
T PRK07261 1 MKIAIIGYSGSGKSTLARFLGQH---YNCPVLHLDQ 33 (171)
T ss_pred CEEEEECCCCCCHHHHHHHHHHH---HCCCEEEECC
T ss_conf 98999889998689999999998---7979797022