HHsearch alignment for GI: 254780916 and conserved domain: PRK07270
>PRK07270 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.52 E-value=5.6e-07 Score=68.92 Aligned_cols=215 Identities=16% Similarity=0.185 Sum_probs=124.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCC---C-CCCCCC-CCCCCCCCCCCCHH
Q ss_conf 111111112222222222222222344320488732777436799999984267---5-433210-12346554210024
Q gi|254780916|r 135 EHCALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGK---R-AFFPFF-IVNCGMIDQDKIEK 209 (482)
Q Consensus 135 ~~~~~~~LiG~S~~m~~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~---r-~~~~fi-~v~c~~~~~~~~e~ 209 (482)
T Consensus 10 RP~~F~dvvGQe~i~~~L~nal~~-~ri~HAyLF~GP~GtGKts~ArifAkaLnC~~~~~~~pC~~C~~C~~i~~g~~~D 88 (557)
T PRK07270 10 RSQTFDEMVGQEVVATTLKQAVES-GKISHAYLFSGPRGTGKTSAAKIFAKAMNCPNQVDGEPCNNCDICRDITNGSLED 88 (557)
T ss_pred CCCCHHHHCCHHHHHHHHHHHHHC-CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCC
T ss_conf 899876714819999999999985-9954044210899868999999999995799989999888777999987589997
Q ss_pred HHHCCCCCCCCC-CCCCCCC-----C--CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEC
Q ss_conf 331125555322-1110012-----3--4466714751664200188999888877642001123553212343156521
Q gi|254780916|r 210 FLFGDVDLQTKN-SAQFLGK-----F--IEANGGTIVLEEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLT 281 (482)
Q Consensus 210 ~lFG~~~~~~~~-~~~~~g~-----~--~~a~~Gtl~l~ei~~L~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t 281 (482)
T Consensus 89 -vi-Eidaas~~gVd~IRei~~~~~~~P~~~~yKV~IIDEah~Ls~~A~NALLKtLEEP-----------P~~~vFIL~T 155 (557)
T PRK07270 89 -VI-EIDAASNNGVDEIRDIRDKSTYAPSRATYKVYIIDEVHMLSTGAFNALLKTLEEP-----------TENVVFILAT 155 (557)
T ss_pred -EE-EECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHCC-----------CCCEEEEEEE
T ss_conf -48-7347776788999999998423877788389997144534999999899985289-----------9876999984
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 433211111123337999886543344677877442-------2225566777641011223333211111000122338
Q gi|254780916|r 282 EKNLLPQVKSHVFRKDLYYRISVFLINISTLRSRSE-------DIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPW 354 (482)
Q Consensus 282 ~~~L~~~~~~g~fr~dLy~rL~~~~i~iPpLReR~e-------DI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y~W 354 (482)
T Consensus 156 tep-~kI--------------------l~TI~SRCQrf~F~~i~~~~i~~~-L~~I~~~E~i---~~~~~aL~~Ia~~a- 209 (557)
T PRK07270 156 TEL-HKI--------------------PATILSRVQRFEFKSIKTKAIREH-LAWILDKEGI---SFEVEALNLIARRA- 209 (557)
T ss_pred CCH-HHC--------------------CHHHHHHHHHCCCCCCCHHHHHHH-HHHHHHHCCC---CCCHHHHHHHHHHC-
T ss_conf 994-759--------------------288874300010888999999999-9999998399---86999999999977-
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
Q ss_conf 98689999999999874389810688954542124
Q gi|254780916|r 355 IDNVQELKNILLRAVIGLKDSHLTEDRFVLLLSRE 389 (482)
Q Consensus 355 PGNvREL~n~i~r~~i~~~~~~i~~~~~~~~l~~~ 389 (482)
T Consensus 210 ~G~mRdAlsiLdQ~~s~~~~~~it~~~v~~~~G~~ 244 (557)
T PRK07270 210 EGGMRDALSILDQALSLSQDNQVTIAIAEEITGSI 244 (557)
T ss_pred CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCC
T ss_conf 99687899999999971799976799999996899