HHsearch alignment for GI: 254780916 and conserved domain: PRK07994
>PRK07994 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.24 E-value=3.9e-05 Score=55.91 Aligned_cols=222 Identities=14% Similarity=0.214 Sum_probs=118.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCC----CC-CCCCCCCCCCCCCH
Q ss_conf 21111111122222222222222223443204887327774367999999842675433----21-01234655421002
Q gi|254780916|r 134 NEHCALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFF----PF-FIVNCGMIDQDKIE 208 (482)
Q Consensus 134 ~~~~~~~~LiG~S~~m~~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~----~f-i~v~c~~~~~~~~e 208 (482)
T Consensus 10 ~Rp~~f~~~vGQ~~v~~~l~na~~~-~r~~haylf~G~rG~GKtt~ari~ak~lnc~~~~~~~pcg~c~~c~~i~~g~~~ 88 (643)
T PRK07994 10 WRPQTFADVVGQEHVLTALANGLSL-GRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFV 88 (643)
T ss_pred HCCCCHHHHCCCHHHHHHHHHHHHH-CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCC
T ss_conf 2888666653879999999999982-986634874589988888999999999679999999978767768988658988
Q ss_pred HHHHCCCCCC-CCCCCCCCCCCCCC-------CCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
Q ss_conf 4331125555-32211100123446-------671475166420018899988887764200112355321234315652
Q gi|254780916|r 209 KFLFGDVDLQ-TKNSAQFLGKFIEA-------NGGTIVLEEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFL 280 (482)
Q Consensus 209 ~~lFG~~~~~-~~~~~~~~g~~~~a-------~~Gtl~l~ei~~L~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~ 280 (482)
T Consensus 89 d-~~-eidaas~~~vd~~rel~~~~~y~p~~~r~kvyiidEvhmls~~afnalLKtlEeP-----------p~hv~fila 155 (643)
T PRK07994 89 D-LI-EIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-----------PAHVKFLLA 155 (643)
T ss_pred C-EE-EEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECHHHCCHHHHHHHHHHHCCC-----------CHHCEEEEE
T ss_conf 7-58-8636777888999999984466887785369997221015899999999862378-----------610089986
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 14332111111233379998865433446778774422225566777641011223333211111000122338986899
Q gi|254780916|r 281 TEKNLLPQVKSHVFRKDLYYRISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQE 360 (482)
Q Consensus 281 t~~~L~~~~~~g~fr~dLy~rL~~~~i~iPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y~WPGNvRE 360 (482)
T Consensus 156 TT~~-~k~p~-TilSRC~~f~~~--~~----------~~~~i~~~-l~~i~~~e~---i~~~~~al~~ia~~a-~gs~rd 216 (643)
T PRK07994 156 TTDP-QKLPV-TILSRCLQFHLK--AL----------DVEQIRHQ-LEHILNEEH---IAHEPRALQLLARAA-DGSLRD 216 (643)
T ss_pred CCCH-HHCCH-HHHHHHHHEECC--CC----------CHHHHHHH-HHHHHHHCC---CCCCHHHHHHHHHHC-CCCHHH
T ss_conf 0774-54847-899777650016--69----------99999999-999999759---987889999999974-786566
Q ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHCCC
Q ss_conf 99999999874389810688954542124
Q gi|254780916|r 361 LKNILLRAVIGLKDSHLTEDRFVLLLSRE 389 (482)
Q Consensus 361 L~n~i~r~~i~~~~~~i~~~~~~~~l~~~ 389 (482)
T Consensus 217 alsl~dq~i~~-~~~~~~~~~v~~mlg~~ 244 (643)
T PRK07994 217 ALSLTDQAIAS-GDGQVSTQAVSAMLGTL 244 (643)
T ss_pred HHHHHHHHHHH-CCCCCCHHHHHHHHCCC
T ss_conf 88899999986-58974799999985899