HHsearch alignment for GI: 254780916 and conserved domain: PRK07994

>PRK07994 DNA polymerase III subunits gamma and tau; Validated.
Probab=98.24  E-value=3.9e-05  Score=55.91  Aligned_cols=222  Identities=14%  Similarity=0.214  Sum_probs=118.1

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCC----CC-CCCCCCCCCCCCCH
Q ss_conf             21111111122222222222222223443204887327774367999999842675433----21-01234655421002
Q gi|254780916|r  134 NEHCALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFF----PF-FIVNCGMIDQDKIE  208 (482)
Q Consensus       134 ~~~~~~~~LiG~S~~m~~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~----~f-i~v~c~~~~~~~~e  208 (482)
T Consensus        10 ~Rp~~f~~~vGQ~~v~~~l~na~~~-~r~~haylf~G~rG~GKtt~ari~ak~lnc~~~~~~~pcg~c~~c~~i~~g~~~   88 (643)
T PRK07994         10 WRPQTFADVVGQEHVLTALANGLSL-GRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFV   88 (643)
T ss_pred             HCCCCHHHHCCCHHHHHHHHHHHHH-CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCC
T ss_conf             2888666653879999999999982-986634874589988888999999999679999999978767768988658988


Q ss_pred             HHHHCCCCCC-CCCCCCCCCCCCCC-------CCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
Q ss_conf             4331125555-32211100123446-------671475166420018899988887764200112355321234315652
Q gi|254780916|r  209 KFLFGDVDLQ-TKNSAQFLGKFIEA-------NGGTIVLEEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFL  280 (482)
Q Consensus       209 ~~lFG~~~~~-~~~~~~~~g~~~~a-------~~Gtl~l~ei~~L~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~  280 (482)
T Consensus        89 d-~~-eidaas~~~vd~~rel~~~~~y~p~~~r~kvyiidEvhmls~~afnalLKtlEeP-----------p~hv~fila  155 (643)
T PRK07994         89 D-LI-EIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEP-----------PAHVKFLLA  155 (643)
T ss_pred             C-EE-EEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECHHHCCHHHHHHHHHHHCCC-----------CHHCEEEEE
T ss_conf             7-58-8636777888999999984466887785369997221015899999999862378-----------610089986


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             14332111111233379998865433446778774422225566777641011223333211111000122338986899
Q gi|254780916|r  281 TEKNLLPQVKSHVFRKDLYYRISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQE  360 (482)
Q Consensus       281 t~~~L~~~~~~g~fr~dLy~rL~~~~i~iPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~y~WPGNvRE  360 (482)
T Consensus       156 TT~~-~k~p~-TilSRC~~f~~~--~~----------~~~~i~~~-l~~i~~~e~---i~~~~~al~~ia~~a-~gs~rd  216 (643)
T PRK07994        156 TTDP-QKLPV-TILSRCLQFHLK--AL----------DVEQIRHQ-LEHILNEEH---IAHEPRALQLLARAA-DGSLRD  216 (643)
T ss_pred             CCCH-HHCCH-HHHHHHHHEECC--CC----------CHHHHHHH-HHHHHHHCC---CCCCHHHHHHHHHHC-CCCHHH
T ss_conf             0774-54847-899777650016--69----------99999999-999999759---987889999999974-786566


Q ss_pred             HHHHHHHHHHHCCCCCCCHHHHHHHHCCC
Q ss_conf             99999999874389810688954542124
Q gi|254780916|r  361 LKNILLRAVIGLKDSHLTEDRFVLLLSRE  389 (482)
Q Consensus       361 L~n~i~r~~i~~~~~~i~~~~~~~~l~~~  389 (482)
T Consensus       217 alsl~dq~i~~-~~~~~~~~~v~~mlg~~  244 (643)
T PRK07994        217 ALSLTDQAIAS-GDGQVSTQAVSAMLGTL  244 (643)
T ss_pred             HHHHHHHHHHH-CCCCCCHHHHHHHHCCC
T ss_conf             88899999986-58974799999985899