HHsearch alignment for GI: 254780916 and conserved domain: PRK08058

Probab=95.94  E-value=0.0054  Score=40.76  Aligned_cols=118  Identities=20%  Similarity=0.332  Sum_probs=58.9

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH---C-CCCCCCCC-CCCCCCCCC----CCCCHH
Q ss_conf             11112222222222222222344320488732777436799999984---2-67543321-012346554----210024
Q gi|254780916|r  139 LDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHE---S-GKRAFFPF-FIVNCGMID----QDKIEK  209 (482)
Q Consensus       139 ~~~LiG~S~~m~~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~---~-s~r~~~~f-i~v~c~~~~----~~~~e~  209 (482)
T Consensus         4 ~~~~~~~Q~~i~~~L~~~i~~~rl~HA~Lf~Gp~G~GK~~~A~~~A~~LlC~~~~~~~~Cg~C~~C~~~~~~~HPD~~~-   82 (329)
T PRK08058          4 WEQLTALQPIVVKMLQNSIAKNRLAHAYLFEGAKGTGKKATALWLAKSLFCLERNGVEPCGTCTNCKRIESGNHPDVHL-   82 (329)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEE-
T ss_conf             7888831899999999999859966156557899988999999999997399999999887888999987699997677-


Q ss_pred             HHHCCCCCCCCCCCCCCCC---C----CCCCCCEEEECCCCHHHHHHHHHHHHHHHHH
Q ss_conf             3311255553221110012---3----4466714751664200188999888877642
Q gi|254780916|r  210 FLFGDVDLQTKNSAQFLGK---F----IEANGGTIVLEEPDALPLAVQGRIYNFIETG  260 (482)
Q Consensus       210 ~lFG~~~~~~~~~~~~~g~---~----~~a~~Gtl~l~ei~~L~~~~Q~~Ll~~l~~~  260 (482)
T Consensus        83 -i~p--~~~~i~idqiR~L~~~~~~~p~~g~~KV~II~~Ae~m~~~AaNALLKtLEEP  137 (329)
T PRK08058         83 -VAP--DGQSIKKDQIRYLKEEFSKSGVESNKKVYIIEHADKMTASAANSLLKFLEEP  137 (329)
T ss_pred             -ECC--CCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCHHHHHHHHHHHHCC
T ss_conf             -456--6140779999999999643875788679997347762999999999986468