HHsearch alignment for GI: 254780916 and conserved domain: PRK08118
>PRK08118 topology modulation protein; Reviewed.
Probab=92.81 E-value=0.093 Score=32.06 Aligned_cols=32 Identities=28% Similarity=0.445 Sum_probs=25.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 48873277743679999998426754332101234
Q gi|254780916|r 165 PIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNC 199 (482)
Q Consensus 165 ~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c 199 (482)
T Consensus 3 rI~IiG~~GsGKSTlAr~L~~~---~~ip~~~LD~ 34 (167)
T PRK08118 3 KIILIGSGGSGKSTLARQLGEK---LNIPVHHLDA 34 (167)
T ss_pred EEEEECCCCCCHHHHHHHHHHH---HCCCEEECCC
T ss_conf 7999889998799999999998---8969796443