HHsearch alignment for GI: 254780916 and conserved domain: PRK08769

>PRK08769 DNA polymerase III subunit delta'; Validated.
Probab=94.08  E-value=0.095  Score=32.00  Aligned_cols=109  Identities=18%  Similarity=0.155  Sum_probs=57.0

Q ss_pred             CCCCCCCCCCCCCCCC---CCCEEEEEECCCCCHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCHHHHHC-CCCC--
Q ss_conf             2222222222222234---43204887327774367999999842675-433210123465542100243311-2555--
Q gi|254780916|r  145 VSPAMIQVVDLARKAG---DCAIPIMIQGEFGVGKKRLSRFIHESGKR-AFFPFFIVNCGMIDQDKIEKFLFG-DVDL--  217 (482)
Q Consensus       145 ~S~~m~~v~~~i~~~a---~~~~~vli~Ge~GtGK~~~A~~iH~~s~r-~~~~fi~v~c~~~~~~~~e~~lFG-~~~~--  217 (482)
T Consensus         5 ~~PWq~~~~~~L~~~i~~~rl~HA~Lf~Gp~G~GK~~~A~~~A~~llc~~~~~~~~~~~~~----~i~---~g~HPD~~~   77 (319)
T PRK08769          5 FSPWQQRAFDQTVAALDAGRLGHGLLICGPEGLGKRAVALALAEHVLASGPDPALAQRTRQ----LIA---AGTHPDLQL   77 (319)
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH----HHH---CCCCCCEEE
T ss_conf             5877689999999999769942068758999878999999999998379979765433889----996---689989687


Q ss_pred             ------CCCCC-------CCCCCCCC-------CCCCCEEEECCCCHHHHHHHHHHHHHHHHH
Q ss_conf             ------53221-------11001234-------466714751664200188999888877642
Q gi|254780916|r  218 ------QTKNS-------AQFLGKFI-------EANGGTIVLEEPDALPLAVQGRIYNFIETG  260 (482)
Q Consensus       218 ------~~~~~-------~~~~g~~~-------~a~~Gtl~l~ei~~L~~~~Q~~Ll~~l~~~  260 (482)
T Consensus        78 i~~~~~~~~~k~k~~I~IdqiR~l~~~~~~~p~~g~~KV~IId~Ad~mn~~AaNalLK~LEEP  140 (319)
T PRK08769         78 VSFIPNRTGDKLRTEIVIEQVREISQKLALTPQYGIAQVVIVDPADAINRSACNALLKTLEEP  140 (319)
T ss_pred             EECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHCCHHHHHHHHHHHCCC
T ss_conf             753444454311234869999999999613720279569998066752899999999982279