HHsearch alignment for GI: 254780916 and conserved domain: PRK10529

>PRK10529 DNA-binding transcriptional activator KdpE; Provisional.
Probab=99.88  E-value=2.3e-22  Score=177.67  Aligned_cols=118  Identities=17%  Similarity=0.228  Sum_probs=109.1

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             8838998699899999999999889889998937--99998608998999978546988899999999857898399992
Q gi|254780916|r   10 HKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPIIVQT   87 (482)
Q Consensus        10 ~~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~~~dlillD~~mP~~dGlell~~i~~~~p~ipvIiiT   87 (482)
T Consensus         1 M~~ILivEDd~~l~~~l~~~L~~~g~~V~~a~~~~~al~~~~~~~~DlviLDi~lP~~dG~~l~~~iR~~~-~~pII~lt   79 (225)
T PRK10529          1 MTNVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWS-AIPVIVLS   79 (225)
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCC-CCCEEEEE
T ss_conf             99899997989999999999998899999979999999986117998999807888888763310001279-98789995


Q ss_pred             CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             68999999988850574322222222222222222222222
Q gi|254780916|r   88 TQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREGV  128 (482)
Q Consensus        88 ~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~~~  128 (482)
T Consensus        80 a~~~~~d~i~~l~~GADDYl~KPf~~~eL~aRi~a~lrr~~  120 (225)
T PRK10529         80 ARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRRHS  120 (225)
T ss_pred             CCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCC
T ss_conf             46898999999976987654078545999999999971403