HHsearch alignment for GI: 254780916 and conserved domain: PRK10693

>PRK10693 response regulator of RpoS; Provisional.
Probab=99.92  E-value=1.2e-24  Score=193.90  Aligned_cols=121  Identities=12%  Similarity=0.218  Sum_probs=110.5

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             28838998699899999999999889889998937--9999860899899997854698889999999985789839999
Q gi|254780916|r    9 RHKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPIIVQ   86 (482)
Q Consensus         9 ~~~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~~~dlillD~~mP~~dGlell~~i~~~~p~ipvIii   86 (482)
T Consensus         6 ~gkkILIVDDd~~~r~~l~~~L~~~G~~V~~A~nG~eAl~~l~~~~pDLIi~Dl~MP~mdGlell~~lr~~~~~~PVIvl   85 (337)
T PRK10693          6 VGKQILIVEDEPVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLKFVEHLRNRGDQTPVLVI   85 (337)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEE
T ss_conf             89989999499999999999999789999998999999999865899999996899999989999999985899649999


Q ss_pred             ECCCCHHHHHHHHHCCCCCCCCCCC-CCCCCCCCCCCCCCCCCC
Q ss_conf             2689999999888505743222222-222222222222222222
Q gi|254780916|r   87 TTQDNIKILNCFLYNRISKFFLNLV-SRKQLCDSIICALREGVV  129 (482)
Q Consensus        87 T~~~~~~~~~~a~~~g~~d~l~KP~-~~~~L~~~i~~al~~~~~  129 (482)
T Consensus        86 Ta~~~~~d~v~al~~GA~DyL~KPI~d~~~Lr~~v~a~l~~~~~  129 (337)
T PRK10693         86 SATENMADIAKALRLGVEDVLLKPVKDLNRLREAVFACLYPSMF  129 (337)
T ss_pred             ECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf             86899999999997499589978969999999999987517778