HHsearch alignment for GI: 254780916 and conserved domain: PRK10693
>PRK10693 response regulator of RpoS; Provisional.
Probab=99.92 E-value=1.2e-24 Score=193.90 Aligned_cols=121 Identities=12% Similarity=0.218 Sum_probs=110.5
Q ss_pred CCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 28838998699899999999999889889998937--9999860899899997854698889999999985789839999
Q gi|254780916|r 9 RHKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPIIVQ 86 (482)
Q Consensus 9 ~~~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~~~dlillD~~mP~~dGlell~~i~~~~p~ipvIii 86 (482)
T Consensus 6 ~gkkILIVDDd~~~r~~l~~~L~~~G~~V~~A~nG~eAl~~l~~~~pDLIi~Dl~MP~mdGlell~~lr~~~~~~PVIvl 85 (337)
T PRK10693 6 VGKQILIVEDEPVFRSLLDSWFSSLGATTVLAADGVDALELLGGFTPDLMICDIAMPRMNGLKFVEHLRNRGDQTPVLVI 85 (337)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEE
T ss_conf 89989999499999999999999789999998999999999865899999996899999989999999985899649999
Q ss_pred ECCCCHHHHHHHHHCCCCCCCCCCC-CCCCCCCCCCCCCCCCCC
Q ss_conf 2689999999888505743222222-222222222222222222
Q gi|254780916|r 87 TTQDNIKILNCFLYNRISKFFLNLV-SRKQLCDSIICALREGVV 129 (482)
Q Consensus 87 T~~~~~~~~~~a~~~g~~d~l~KP~-~~~~L~~~i~~al~~~~~ 129 (482)
T Consensus 86 Ta~~~~~d~v~al~~GA~DyL~KPI~d~~~Lr~~v~a~l~~~~~ 129 (337)
T PRK10693 86 SATENMADIAKALRLGVEDVLLKPVKDLNRLREAVFACLYPSMF 129 (337)
T ss_pred ECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 86899999999997499589978969999999999987517778