HHsearch alignment for GI: 254780916 and conserved domain: PRK10701

>PRK10701 DNA-binding transcriptional regulator RstA; Provisional.
Probab=99.87  E-value=2.2e-22  Score=177.77  Aligned_cols=119  Identities=18%  Similarity=0.173  Sum_probs=108.6

Q ss_pred             CCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             8838998699899999999999889889998937--99998608998999978546988899999999857898399992
Q gi|254780916|r   10 HKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKIQVNVIFLSLINCEDDKENILKNIVDKIPIVPIIVQT   87 (482)
Q Consensus        10 ~~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~~~dlillD~~mP~~dGlell~~i~~~~p~ipvIiiT   87 (482)
T Consensus         1 M~kILlVEDd~~l~~~l~~~L~~~g~~v~~a~~g~~a~~~~~~~~~DlvilDi~LP~~dG~~l~~~iR~~~-~~PiI~lt   79 (240)
T PRK10701          1 MNTIVFVEDDAEVGSLIAAYLAKHDIDVTVEPRGDRAEETILREQPDLVLLDIMLPGKDGMTICRDLRPKW-SGPIVLLT   79 (240)
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCC-CCCEEEEE
T ss_conf             99899997999999999999988799999989999999998617999999928997678878763110258-98789994


Q ss_pred             CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             689999999888505743222222222222222222222222
Q gi|254780916|r   88 TQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALREGVV  129 (482)
Q Consensus        88 ~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~~~~~  129 (482)
T Consensus        80 a~~~~~d~v~gl~~GADDYl~KPf~~~eL~aRi~a~lrr~~~  121 (240)
T PRK10701         80 SLDSDMNHILALEMGACDYILKTTPPAVLLARLRLHLRQNEQ  121 (240)
T ss_pred             ECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCC
T ss_conf             057578899999768877641799879999999999965325