HHsearch alignment for GI: 254780916 and conserved domain: PRK11107

>PRK11107 hybrid sensory histidine kinase BarA; Provisional.
Probab=98.39  E-value=9e-06  Score=60.42  Aligned_cols=112  Identities=11%  Similarity=0.091  Sum_probs=87.9

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHH-HCCC-CCEEEE
Q ss_conf             28838998699899999999999889889998937999986089989999785469888999999998-5789-839999
Q gi|254780916|r    9 RHKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVSDLSTISKIQVNVIFLSLINCEDDKENILKNIVD-KIPI-VPIIVQ   86 (482)
Q Consensus         9 ~~~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~al~~l~~~~~dlillD~~mP~~dGlell~~i~~-~~p~-ipvIii   86 (482)
T Consensus       535 ~g~~vlvve~~~~~~~~l~~~L~~~g~~v~~~~~--~~~l~~~~~D~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~il~  612 (920)
T PRK11107        535 AGKRLLYVEPNSLAAQATLDLLSETPLEVTYSPT--LSQLPEAHYDYLLLGCPVTFREPLTMLHERLAKAKSMTDFLILA  612 (920)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHCCCEEEECCC--HHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEE
T ss_conf             5876999769778999999999974964575178--87751368887996166666540667899986300357846997


Q ss_pred             ECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             268999999988850574322222222222222222
Q gi|254780916|r   87 TTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIIC  122 (482)
Q Consensus        87 T~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~  122 (482)
T Consensus       613 ~~s~~~~~~~~~~~~~~~~~L~kPv~~~~L~~~L~~  648 (920)
T PRK11107        613 LPCHEQVNAEQLKQPGADACLSKPLSETRLLPALLT  648 (920)
T ss_pred             ECCCCHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHC
T ss_conf             156434557887642530211277768899998722