HHsearch alignment for GI: 254780916 and conserved domain: PRK11288

>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional.
Probab=91.86  E-value=1.1  Score=24.56  Aligned_cols=160  Identities=11%  Similarity=0.070  Sum_probs=69.6

Q ss_pred             CHHHHHHHHHHHHHCCCEEEEE------CCHH-----HHHHHCCCCCEEEEECCCCCCCH------HHHHHHHHHHCCCC
Q ss_conf             9899999999999889889998------9379-----99986089989999785469888------99999999857898
Q gi|254780916|r   19 DDEQIKIIKDHVESYGYDVFIV------NVSD-----LSTISKIQVNVIFLSLINCEDDK------ENILKNIVDKIPIV   81 (482)
Q Consensus        19 d~~~~~~l~~~L~~~G~~v~~a------~~~a-----l~~l~~~~~dlillD~~mP~~dG------lell~~i~~~~p~i   81 (482)
T Consensus       114 ~~~~~~~~~~~l~~~gl~~~~~~~~~~LSgG~kQrv~ia~aL~~~p~lliLDEPts~LD~~~~~~l~~~l~~l~~~--G~  191 (501)
T PRK11288        114 RRLLNYEAREQLEHLGVDIDPDTPLKYLSIGQRQMVEIAKALMRNARVIAFDEPTSSLSAREIEQLFRVIRELRAE--GR  191 (501)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH--CC
T ss_conf             9999999999998769986657842669999999999999986099899965874568989999998899999872--76


Q ss_pred             CEEEEECCCCHHHHHH-----HHHCCC-CCCCCC--CCCCCCCCCCC-CCCCCCC---CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             3999926899999998-----885057-432222--22222222222-2222222---2222222111111112222222
Q gi|254780916|r   82 PIIVQTTQDNIKILNC-----FLYNRI-SKFFLN--LVSRKQLCDSI-ICALREG---VVPSQENEHCALDSLIAVSPAM  149 (482)
Q Consensus        82 pvIiiT~~~~~~~~~~-----a~~~g~-~d~l~K--P~~~~~L~~~i-~~al~~~---~~~~~~~~~~~~~~LiG~S~~m  149 (482)
T Consensus       192 t-il~isH~l~~~~~~~Drv~vl~~G~iv~~~~~~~~~~~~~l~~~~~~r~~~~~~~~~~~~~~~~~l~~~~l~~-----  265 (501)
T PRK11288        192 V-ILYVSHRMEEIFALCDAITVFRDGRYVATFDDMAQVDRDRLVQAMVGREIGDIYGYRPRPLGDVRLRLKGLKG-----  265 (501)
T ss_pred             C-EEEECCCHHHHHHHCCEEEEEECCEEEEECCCHHHCCHHHHHHHHHCCCHHHCCCCCCCCCCCEEEEEEECCC-----
T ss_conf             1-2651332899997588789711885997637213379999999862855354058788887743799985037-----


Q ss_pred             CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHC
Q ss_conf             2222222223443204887327774367999999842
Q gi|254780916|r  150 IQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHES  186 (482)
Q Consensus       150 ~~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~  186 (482)
T Consensus       266 ~~~~~~vsl~v~~GEivgivG~nGsGKSTL~k~L~Gl  302 (501)
T PRK11288        266 PGLREPISFAVRRGEIVGFFGLVGAGRSELMKLLYGA  302 (501)
T ss_pred             CCCCCCEEEEEECCEEEEEECCCCCCHHHHHHHHCCC
T ss_conf             8745663478708839997568886487999984387