HHsearch alignment for GI: 254780916 and conserved domain: PRK11466

>PRK11466 hybrid sensory histidine kinase TorS; Provisional.
Probab=99.82  E-value=3.1e-19  Score=155.59  Aligned_cols=117  Identities=15%  Similarity=0.153  Sum_probs=106.4

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCH--HHHHHHCC-CCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf             28838998699899999999999889889998937--99998608-9989999785469888999999998578983999
Q gi|254780916|r    9 RHKRVLIIDKDDEQIKIIKDHVESYGYDVFIVNVS--DLSTISKI-QVNVIFLSLINCEDDKENILKNIVDKIPIVPIIV   85 (482)
Q Consensus         9 ~~~rILIVDDd~~~~~~l~~~L~~~G~~v~~a~~~--al~~l~~~-~~dlillD~~mP~~dGlell~~i~~~~p~ipvIi   85 (482)
T Consensus       680 ~~lrVLvVEDn~~N~~v~~~~L~~lG~~v~~A~nG~eAle~l~~~~~fDlVLmDi~MP~mDG~eatr~iR~~~~~~pIIA  759 (912)
T PRK11466        680 DGLRLLLIEDNPLTQRITVEMLNTSGAQVVAVGNAAQALETLQNSEPFAAALVDFDLPDYDGITLARQLAQQYPSLVLIG  759 (912)
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCEEE
T ss_conf             88869999487889999999999869989998999999999971899858987699999989999999986199997899


Q ss_pred             EECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9268999999988850574322222222222222222222
Q gi|254780916|r   86 QTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALR  125 (482)
Q Consensus        86 iT~~~~~~~~~~a~~~g~~d~l~KP~~~~~L~~~i~~al~  125 (482)
T Consensus       760 lTA~a~~ed~~~~l~aGmd~~L~KPv~~~~L~~~l~~~l~  799 (912)
T PRK11466        760 FSAHVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYLQ  799 (912)
T ss_pred             ECCCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHC
T ss_conf             7798788999999976998775498999999999999846