HHsearch alignment for GI: 254780916 and conserved domain: PRK13407

Probab=99.43  E-value=5.2e-13  Score=111.60  Aligned_cols=161  Identities=14%  Similarity=0.122  Sum_probs=112.3

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCC--CCCEEEEEECCCCCHHHHHHHHHHHCCCC------------------------
Q ss_conf             1111111222222222222222234--43204887327774367999999842675------------------------
Q gi|254780916|r  136 HCALDSLIAVSPAMIQVVDLARKAG--DCAIPIMIQGEFGVGKKRLSRFIHESGKR------------------------  189 (482)
Q Consensus       136 ~~~~~~LiG~S~~m~~v~~~i~~~a--~~~~~vli~Ge~GtGK~~~A~~iH~~s~r------------------------  189 (482)
T Consensus         4 ~~Pfs~IvGQe~~----K~AL~laav~p~~ggvLi~G~~GtgKStlaR~l~~iLP~~~~~e~~~~~~~~~~~~~~~~~~~   79 (334)
T PRK13407          4 PFPFSAIVGQEEM----KQAMVLTAIDPGIGGVLVFGDRGTGKSTAVRALAALLPLIKAVEGCPVNSARPEDCPEWAEVS   79 (334)
T ss_pred             CCCHHHHCCCHHH----HHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCHHHHHCC
T ss_conf             9992376493999----999999772789860899789986599999999972899511036755667742113343114


Q ss_pred             ------CCCCCCCCCCCCCCCCCCHHHHHCCCC---CC-CCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf             ------433210123465542100243311255---55-32211100123446671475166420018899988887764
Q gi|254780916|r  190 ------AFFPFFIVNCGMIDQDKIEKFLFGDVD---LQ-TKNSAQFLGKFIEANGGTIVLEEPDALPLAVQGRIYNFIET  259 (482)
Q Consensus       190 ------~~~~fi~v~c~~~~~~~~e~~lFG~~~---~~-~~~~~~~~g~~~~a~~Gtl~l~ei~~L~~~~Q~~Ll~~l~~  259 (482)
T Consensus        80 ~~~~~~~~~p~v~l-----Pl~atedr~~G~ldie~al~~G~~~~~PGlLa~Ah~GVLylDEinll~~~vld~Ll~~~e~  154 (334)
T PRK13407         80 STTMVERPTPVIDL-----PLGATEDRVVGALDIERALTRGEKAFEPGLLARANRGYLYIDEVNLLEDHIVDLLLDVAQS  154 (334)
T ss_pred             CCCCCCCCCCCCCC-----CCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHCCCCEEEEECHHHCCHHHHHHHHHHHHC
T ss_conf             55534489987678-----9999986644742188886269877886054340288678720533338899999988716


Q ss_pred             HH--CCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             20--011235532123431565214332111111233379998865433446778
Q gi|254780916|r  260 GK--IEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLYYRISVFLINISTL  312 (482)
Q Consensus       260 ~~--~~~~g~~~~~~~~~RiIa~t~~~L~~~~~~g~fr~dLy~rL~~~~i~iPpL  312 (482)
T Consensus       155 G~~~IeReg~s~~~ParF~LVatmNP------eEg~Lrp~lLDRf~-l~v~v~~~  202 (334)
T PRK13407        155 GENVVEREGLSIRHPARFVLVGSGNP------EEGELRPQLLDRFG-LSVEVRSP  202 (334)
T ss_pred             CCEEEEECCEEEECCCCCEEEEEECC------CCCCCCHHHHHHHC-EEEEECCC
T ss_conf             95799977634603662658982088------87775989983610-06871487