HHsearch alignment for GI: 254780916 and conserved domain: PTZ00111
>PTZ00111 DNA replication licensing factor MCM4; Provisional.
Probab=97.76 E-value=8.5e-05 Score=53.53 Aligned_cols=114 Identities=14% Similarity=0.189 Sum_probs=75.9
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC---CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 4320488732777436799999984267543321012---3465542100243311255553221110012344667147
Q gi|254780916|r 161 DCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIV---NCGMIDQDKIEKFLFGDVDLQTKNSAQFLGKFIEANGGTI 237 (482)
Q Consensus 161 ~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v---~c~~~~~~~~e~~lFG~~~~~~~~~~~~~g~~~~a~~Gtl 237 (482)
T Consensus 491 RgdIniLl~GDPgtaKSQlL~yv~~iaPRg--vytsGkgsSavGLTA~v~------~~d~~tg~~~LEaGALVLaD~Gvc 562 (916)
T PTZ00111 491 RGIINVLLCGDPGTAKSQLLHYTHLLSPRS--IYTSGKSSSSVGLTASIK------FNESDNGRAMIQPGAVVLANGGVC 562 (916)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHCCCE--EEECCCCCCCCCCEEEEE------ECCCCCCCEEEECCCEEECCCCEE
T ss_conf 454059995799601899999999728742--674598654226468998------326887868985480897279879
Q ss_pred EECCCCHHHHHHHHHHHHHHHHHHCCCC--CCCCCCCCCCEEEEECC
Q ss_conf 5166420018899988887764200112--35532123431565214
Q gi|254780916|r 238 VLEEPDALPLAVQGRIYNFIETGKIEFF--DSRGAIRLDVRLIFLTE 282 (482)
Q Consensus 238 ~l~ei~~L~~~~Q~~Ll~~l~~~~~~~~--g~~~~~~~~~RiIa~t~ 282 (482)
T Consensus 563 cIDEFDKM~~~~rs~lhEaMEQQtvSIAKAGI~~tLnARtSvLAaAN 609 (916)
T PTZ00111 563 CIDELDKCHNESRLSLYEVMEQQTVTIAKAGIVATLKAETAILASCN 609 (916)
T ss_pred EEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHCC
T ss_conf 96222036856788999988663123532350454120345655328