HHsearch alignment for GI: 254780916 and conserved domain: TIGR02640
>TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN; InterPro: IPR013462 The GvpN protein is associated with the production of gas vesicles produced in some prokaryotes to give cells buoyancy , . It belongs to a larger family of ATPases .; GO: 0000166 nucleotide binding, 0005524 ATP binding, 0031412 gas vesicle organization and biogenesis, 0031411 gas vesicle.
Probab=98.69 E-value=3.2e-08 Score=77.73 Aligned_cols=158 Identities=19% Similarity=0.243 Sum_probs=110.7
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCC--CC
Q ss_conf 2222222222222234432048873277743679999998426754332101234655421002433112555532--21
Q gi|254780916|r 145 VSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQDKIEKFLFGDVDLQTK--NS 222 (482)
Q Consensus 145 ~S~~m~~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~~~~~e~~lFG~~~~~~~--~~ 222 (482)
T Consensus 3 ~t~~v~~v~~R~l~yL~~G~PvHl~GPaG~GKT~LA~hvA~~---r~RPV~l~~G---d~eL~~~DLvG~~~g~~~~kv~ 76 (265)
T TIGR02640 3 ETDAVKRVTSRALRYLKSGYPVHLRGPAGTGKTTLAMHVARK---RDRPVVLING---DAELTTSDLVGSYAGYTRKKVV 76 (265)
T ss_pred CCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHH---CCCCEEEEEC---CCCCCCCCCCCCCCCCEEEEEE
T ss_conf 772379999987663227886674478885568999999973---6896899865---8232654423154675222232
Q ss_pred CC---CC--------------CCCCCCCCC-EEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCC-----CCCCCCCEEEE
Q ss_conf 11---00--------------123446671-475166420018899988887764200112355-----32123431565
Q gi|254780916|r 223 AQ---FL--------------GKFIEANGG-TIVLEEPDALPLAVQGRIYNFIETGKIEFFDSR-----GAIRLDVRLIF 279 (482)
Q Consensus 223 ~~---~~--------------g~~~~a~~G-tl~l~ei~~L~~~~Q~~Ll~~l~~~~~~~~g~~-----~~~~~~~RiIa 279 (482)
T Consensus 77 DqfihnV~K~~d~~~~~W~D~rLt~Av~eG~TLVYdEF~RskP~~nNVLLSvlEE~vL~LPg~~~~~~Yv~VhP~FR~If 156 (265)
T TIGR02640 77 DQFIHNVVKLEDIVRQNWVDNRLTLAVREGFTLVYDEFTRSKPETNNVLLSVLEEGVLELPGKRGESRYVDVHPEFRVIF 156 (265)
T ss_pred ECCEEEEECCCCCCCCCCCCCHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEE
T ss_conf 01211134251220026678357899756972766475788620456567555523215888787787225788702463
Q ss_pred ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2143321111112333799988654334467
Q gi|254780916|r 280 LTEKNLLPQVKSHVFRKDLYYRISVFLINIS 310 (482)
Q Consensus 280 ~t~~~L~~~~~~g~fr~dLy~rL~~~~i~iP 310 (482)
T Consensus 157 TSNp~--EYAGVh~~QDALlDRL~ti~~D~~ 185 (265)
T TIGR02640 157 TSNPV--EYAGVHETQDALLDRLVTISMDYP 185 (265)
T ss_pred CCCCC--CCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 14870--105767716677664400457854