>TIGR02688 TIGR02688 conserved hypothetical protein TIGR02688; InterPro: IPR014061 Members of this entry are uncharacterised proteins sporadically distributed in bacteria and archaea, about 470 amino acids in length. Several members of this family appear in public databases with annotation as ATP-dependent protease La, despite the lack of similarity to families IPR004815 from INTERPRO (ATP-dependent protease La) or IPR003111 from INTERPRO (ATP-dependent protease La (LON) domain). The proteins in this entry are encoded by genes repeatedly found downstream of another gene that encodes an uncharacterised protein of about 880 amino acids in length (see IPR014060 from INTERPRO)..

Probab=96.34 E-value=0.0028 Score=42.83 Aligned_cols=168 Identities=21% Similarity=0.326 Sum_probs=105.3 Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCC-CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE Q ss_conf 43204887327774367999999842675433210-12346554210024331125555322111001234466714751 Q gi|254780916|r 161 DCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFF-IVNCGMIDQDKIEKFLFGDVDLQTKNSAQFLGKFIEANGGTIVL 239 (482) Q Consensus 161 ~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi-~v~c~~~~~~~~e~~lFG~~~~~~~~~~~~~g~~~~a~~Gtl~l 239 (482) T Consensus 215 E~N~Nl~ELgPk~TGKSY~Y~n~--------Sp~~~liSGG~~T~A~----L------FyN~~t~~~Glv~~--~D~Vaf 274 (470) T TIGR02688 215 EKNYNLVELGPKGTGKSYIYENL--------SPYVILISGGEITVAK----L------FYNISTRKIGLVGL--WDVVAF 274 (470) T ss_pred CCCCCEEEECCCCCCCCHHEECC--------CCCEEEEECCCCCCCC----C------EEECCCCCCCEEEE--EEEEEE T ss_conf 28713487578887730010067--------8777998388205330----0------24756886433431--335655 Q ss_pred CCCCHH----HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCC----CCCHH--------HHHHH--HHHH Q ss_conf 664200----188999888877642001123553212343156521433211----11112--------33379--9988 Q gi|254780916|r 240 EEPDAL----PLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLP----QVKSH--------VFRKD--LYYR 301 (482) Q Consensus 240 ~ei~~L----~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~~L~~----~~~~g--------~fr~d--Ly~r 301 (482) T Consensus 275 DEv~~~~~~~~~e~~~~LK~Y~e~G~f~R-GG~~~~~s~AS~v~~GNVn~~~~~E~~~~~~~Lf~~LPe~~r~DsAFLDR 353 (470) T TIGR02688 275 DEVATLKFEKPKELIGILKDYLESGSFTR-GGDETLSSDASFVFLGNVNVNLTSESMVKQSDLFSPLPEFMREDSAFLDR 353 (470) T ss_pred CCHHCCCCCCCHHHHHHHHHHHHCCCCCC-CCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH T ss_conf 02101001680678877555642576301-56311011323776631468888787466666430387220000147867 Q ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CCCCCCHHHH Q ss_conf 65433--446778774422225566777641011223333211111000122-3389868999 Q gi|254780916|r 302 ISVFL--INISTLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTK-YPWIDNVQEL 361 (482) Q Consensus 302 L~~~~--i~iPpLReR~eDI~~L~~~fl~~~~~~~~~~~~~ls~~a~~~L~~-y~WPGNvREL 361 (482) T Consensus 354 iHgylPGWeipki~qs~-----------e~f~~~YG~~-vDyfaE~L~~lR~~~~~~~~~~r~ 404 (470) T TIGR02688 354 IHGYLPGWEIPKIRQSK-----------EMFSNGYGLV-VDYFAEALRELREDHEYADLVDRH 404 (470) T ss_pred HHHCCCCCCCCCCCCCH-----------HHHHCCCCEE-EHHHHHHHHHHCCCCCHHHHHHHH T ss_conf 74038886335125631-----------2433554256-304789999841637866786676

HHsearch alignment for GI: 254780916 and conserved domain: TIGR02688