HHsearch alignment for GI: 254780916 and conserved domain: TIGR02928

>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=98.42  E-value=1.4e-07  Score=73.24  Aligned_cols=228  Identities=21%  Similarity=0.257  Sum_probs=131.0

Q ss_pred             CCCCCC--CCCCCCCCCCCCCCCCCCCCC---CCEEEEEECCCCCHHHHHHHHH----HHCCCCCCCC-C--CCCCCCCC
Q ss_conf             111111--112222222222222222344---3204887327774367999999----8426754332-1--01234655
Q gi|254780916|r  135 EHCALD--SLIAVSPAMIQVVDLARKAGD---CAIPIMIQGEFGVGKKRLSRFI----HESGKRAFFP-F--FIVNCGMI  202 (482)
Q Consensus       135 ~~~~~~--~LiG~S~~m~~v~~~i~~~a~---~~~~vli~Ge~GtGK~~~A~~i----H~~s~r~~~~-f--i~v~c~~~  202 (482)
T Consensus        10 ~dY~Pden~i~hRdeqI~~l~~~L~~~l~PG~~P~Ni~iYGkTGtGKT~vt~~v~~~l~~~~~~~d~~D~~~~~~NC~~~   89 (383)
T TIGR02928        10 PDYVPDENRIVHRDEQIEELAKALRPILRPGSRPSNIFIYGKTGTGKTAVTKYVMKELEEAAEDRDVRDVSTVYINCQIL   89 (383)
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
T ss_conf             57702742466867899999999887506748987258878889878899999999999986226997158999778546


Q ss_pred             CCC-C----CHHHH----HCCCCCCCCCCCCC----CC-CCCCCCCCE--EEECCCCHH--HHHHHH-----HHHHHHHH
Q ss_conf             421-0----02433----11255553221110----01-234466714--751664200--188999-----88887764
Q gi|254780916|r  203 DQD-K----IEKFL----FGDVDLQTKNSAQF----LG-KFIEANGGT--IVLEEPDAL--PLAVQG-----RIYNFIET  259 (482)
Q Consensus       203 ~~~-~----~e~~l----FG~~~~~~~~~~~~----~g-~~~~a~~Gt--l~l~ei~~L--~~~~Q~-----~Ll~~l~~  259 (482)
T Consensus        90 ~T~y~~~~~L~~~ln~~~~~~~vP~tG~s~~~~~~~l~~~l~~~~~~~~~ivLDEiD~Lv~~~-~d~PAyS~~LY~L~Ra  168 (383)
T TIGR02928        90 DTSYQVLVELANQLNRRGSGEEVPTTGLSTSEVFRELYKELNRERGDSLIIVLDEIDKLVRKD-DDDPAYSKLLYQLSRA  168 (383)
T ss_pred             CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCC-CCCHHHHHHHHHHHHH
T ss_conf             846999999999851577888898877878999999999983201887999862310221588-8880787885343310


Q ss_pred             HHCCCCCCCCCCC-CCCEEEEECCC-----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHC-
Q ss_conf             2001123553212-34315652143-----321111112333799988654334467787744-222255667776410-
Q gi|254780916|r  260 GKIEFFDSRGAIR-LDVRLIFLTEK-----NLLPQVKSHVFRKDLYYRISVFLINISTLRSRS-EDIPWLVHFFLQSFC-  331 (482)
Q Consensus       260 ~~~~~~g~~~~~~-~~~RiIa~t~~-----~L~~~~~~g~fr~dLy~rL~~~~i~iPpLReR~-eDI~~L~~~fl~~~~-  331 (482)
T Consensus       169 ------~~~~~~~~~~vgvIgISND~~f~~~Ld~RVkSs---------L~~eei~FpPYdA~eL~~I-------L~~R~v  226 (383)
T TIGR02928       169 ------RENGDLENAKVGVIGISNDLKFRENLDPRVKSS---------LCEEEIVFPPYDAEELRDI-------LENRAV  226 (383)
T ss_pred             ------HHCCCCCCCCEEEEEEECCCHHHHHCCCCEECC---------CCCCCCEECCCCHHHHHHH-------HHHHHH
T ss_conf             ------003577885348999865714364457530132---------4874004079886999999-------972031


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHHHHHH---HCCCCCCCHHHHHHHH
Q ss_conf             11223333211111000122338--9868999999999987---4389810688954542
Q gi|254780916|r  332 TKNAIKQISISDKALSLLTKYPW--IDNVQELKNILLRAVI---GLKDSHLTEDRFVLLL  386 (482)
Q Consensus       332 ~~~~~~~~~ls~~a~~~L~~y~W--PGNvREL~n~i~r~~i---~~~~~~i~~~~~~~~l  386 (482)
T Consensus       227 ~~-AF~dGvl~d~VI~lcAA~aAq~hGDAR~AiDLLR~AGe~A~~~g~~~Vt~~HV~~A~  285 (383)
T TIGR02928       227 EK-AFYDGVLDDGVIPLCAALAAQEHGDARKAIDLLRVAGEIAEREGAERVTEDHVEEAQ  285 (383)
T ss_pred             HH-CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf             20-336885462279999998620678789999999987687531576310088899999