HHsearch alignment for GI: 254780916 and conserved domain: TIGR03015

>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily. Members of this protein are marked as probable ATPases by the nucleotide binding P-loop motif GXXGXGKTT, a motif DEAQ similar to the DEAD/H box of helicases, and extensive homology to ATPases of MSHA-type pilus systems and to GspA proteins associated with type II protein secretion systems.
Probab=98.28  E-value=3.4e-06  Score=63.38  Aligned_cols=226  Identities=12%  Similarity=0.105  Sum_probs=116.4

Q ss_pred             CCCCCCCCCCCCCCCCCCCC-CCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCHHH--HHCCCCC
Q ss_conf             12222222222222222344-32048873277743679999998426754332101234655421-00243--3112555
Q gi|254780916|r  142 LIAVSPAMIQVVDLARKAGD-CAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQD-KIEKF--LFGDVDL  217 (482)
Q Consensus       142 LiG~S~~m~~v~~~i~~~a~-~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~~~-~~e~~--lFG~~~~  217 (482)
T Consensus        21 ~~y~s~~h~~al~~L~~~l~~~~g~~lltGe~GtGKTtllr~l~~~l~~~~~~~~~i~~~~l~~~~ll~~i~~~lg~~~~  100 (269)
T TIGR03015        21 FFYPSKGHKRAMAYLEYGLSQREGFILITGEVGAGKTTLIRNLLKRLDQERVVAAKLVNTRVDAEDLLRMVAADFGLETE  100 (269)
T ss_pred             HCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCC
T ss_conf             41478669999999999996489659997299898899999999845934548999769999999999999998598988


Q ss_pred             CCC--CCCCCC-C-CCCCC---CCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCC
Q ss_conf             532--211100-1-23446---6714751664200188999888877642001123553212343156521433211111
Q gi|254780916|r  218 QTK--NSAQFL-G-KFIEA---NGGTIVLEEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVK  290 (482)
Q Consensus       218 ~~~--~~~~~~-g-~~~~a---~~Gtl~l~ei~~L~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~~L~~~~~  290 (482)
T Consensus       101 ~~~~~~~~~~l~~~L~~~~~~g~~~vliIDEAq~L~~~~Le~L-r~L~n~e~---~~~~----ll~iiL~GqpeL~~~L~  172 (269)
T TIGR03015       101 GRDKAALLRELEDFLIEQFAAGKRALLVVDEAQNLTPELLEEL-RMLSNFQT---DNAK----LLQIFLVGQPEFRETLQ  172 (269)
T ss_pred             CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCHHHHHHH-HHHHCCCC---CCCC----CEEEEEECCHHHHHHHC
T ss_conf             9899999999999999999669946999724221999999999-99970135---8887----04899957867999872


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             1233379998865433446778774422225566777641011223-333211111000122338986899999999998
Q gi|254780916|r  291 SHVFRKDLYYRISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAI-KQISISDKALSLLTKYPWIDNVQELKNILLRAV  369 (482)
Q Consensus       291 ~g~fr~dLy~rL~~~~i~iPpLReR~eDI~~L~~~fl~~~~~~~~~-~~~~ls~~a~~~L~~y~WPGNvREL~n~i~r~~  369 (482)
T Consensus       173 ~~~~~~-l~qRI~-~~~~L~pl~--~eet~~YI~~RL~~A----G~~~~~~Ft~~A~~~I~~~S-~G~PR~IN~Lc~~aL  243 (269)
T TIGR03015       173 SPQLQQ-LRQRII-ASCHLGPLD--REETREYIEHRLERA----GNRDAPVFSEGAFDAIHRFS-RGIPRLINILCDRLL  243 (269)
T ss_pred             CCCHHH-HHHCEE-EEEEECCCC--HHHHHHHHHHHHHHC----CCCCCCCCCHHHHHHHHHHC-CCCHHHHHHHHHHHH
T ss_conf             740254-555076-799847999--899999999999866----99999985999999999986-990089999999999


Q ss_pred             H---HCCCCCCCHHHHHH
Q ss_conf             7---43898106889545
Q gi|254780916|r  370 I---GLKDSHLTEDRFVL  384 (482)
Q Consensus       370 i---~~~~~~i~~~~~~~  384 (482)
T Consensus       244 l~a~~~~~~~I~~~~v~~  261 (269)
T TIGR03015       244 LSAFLEEKREIGGEEVRE  261 (269)
T ss_pred             HHHHHHCCCCCCHHHHHH
T ss_conf             999994888679999999