HHsearch alignment for GI: 254780916 and conserved domain: TIGR03015
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily. Members of this protein are marked as probable ATPases by the nucleotide binding P-loop motif GXXGXGKTT, a motif DEAQ similar to the DEAD/H box of helicases, and extensive homology to ATPases of MSHA-type pilus systems and to GspA proteins associated with type II protein secretion systems.
Probab=98.28 E-value=3.4e-06 Score=63.38 Aligned_cols=226 Identities=12% Similarity=0.105 Sum_probs=116.4
Q ss_pred CCCCCCCCCCCCCCCCCCCC-CCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCHHH--HHCCCCC
Q ss_conf 12222222222222222344-32048873277743679999998426754332101234655421-00243--3112555
Q gi|254780916|r 142 LIAVSPAMIQVVDLARKAGD-CAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMIDQD-KIEKF--LFGDVDL 217 (482)
Q Consensus 142 LiG~S~~m~~v~~~i~~~a~-~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~~~~-~~e~~--lFG~~~~ 217 (482)
T Consensus 21 ~~y~s~~h~~al~~L~~~l~~~~g~~lltGe~GtGKTtllr~l~~~l~~~~~~~~~i~~~~l~~~~ll~~i~~~lg~~~~ 100 (269)
T TIGR03015 21 FFYPSKGHKRAMAYLEYGLSQREGFILITGEVGAGKTTLIRNLLKRLDQERVVAAKLVNTRVDAEDLLRMVAADFGLETE 100 (269)
T ss_pred HCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 41478669999999999996489659997299898899999999845934548999769999999999999998598988
Q ss_pred CCC--CCCCCC-C-CCCCC---CCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCC
Q ss_conf 532--211100-1-23446---6714751664200188999888877642001123553212343156521433211111
Q gi|254780916|r 218 QTK--NSAQFL-G-KFIEA---NGGTIVLEEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVK 290 (482)
Q Consensus 218 ~~~--~~~~~~-g-~~~~a---~~Gtl~l~ei~~L~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~~L~~~~~ 290 (482)
T Consensus 101 ~~~~~~~~~~l~~~L~~~~~~g~~~vliIDEAq~L~~~~Le~L-r~L~n~e~---~~~~----ll~iiL~GqpeL~~~L~ 172 (269)
T TIGR03015 101 GRDKAALLRELEDFLIEQFAAGKRALLVVDEAQNLTPELLEEL-RMLSNFQT---DNAK----LLQIFLVGQPEFRETLQ 172 (269)
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCHHHHHHH-HHHHCCCC---CCCC----CEEEEEECCHHHHHHHC
T ss_conf 9899999999999999999669946999724221999999999-99970135---8887----04899957867999872
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 1233379998865433446778774422225566777641011223-333211111000122338986899999999998
Q gi|254780916|r 291 SHVFRKDLYYRISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAI-KQISISDKALSLLTKYPWIDNVQELKNILLRAV 369 (482)
Q Consensus 291 ~g~fr~dLy~rL~~~~i~iPpLReR~eDI~~L~~~fl~~~~~~~~~-~~~~ls~~a~~~L~~y~WPGNvREL~n~i~r~~ 369 (482)
T Consensus 173 ~~~~~~-l~qRI~-~~~~L~pl~--~eet~~YI~~RL~~A----G~~~~~~Ft~~A~~~I~~~S-~G~PR~IN~Lc~~aL 243 (269)
T TIGR03015 173 SPQLQQ-LRQRII-ASCHLGPLD--REETREYIEHRLERA----GNRDAPVFSEGAFDAIHRFS-RGIPRLINILCDRLL 243 (269)
T ss_pred CCCHHH-HHHCEE-EEEEECCCC--HHHHHHHHHHHHHHC----CCCCCCCCCHHHHHHHHHHC-CCCHHHHHHHHHHHH
T ss_conf 740254-555076-799847999--899999999999866----99999985999999999986-990089999999999
Q ss_pred H---HCCCCCCCHHHHHH
Q ss_conf 7---43898106889545
Q gi|254780916|r 370 I---GLKDSHLTEDRFVL 384 (482)
Q Consensus 370 i---~~~~~~i~~~~~~~ 384 (482)
T Consensus 244 l~a~~~~~~~I~~~~v~~ 261 (269)
T TIGR03015 244 LSAFLEEKREIGGEEVRE 261 (269)
T ss_pred HHHHHHCCCCCCHHHHHH
T ss_conf 999994888679999999