HHsearch alignment for GI: 254780916 and conserved domain: cd03227
>cd03227 ABC_Class2 ABC-type Class 2 contains systems involved in cellular processes other than transport. These families are characterised by the fact that the ABC subunit is made up of duplicated, fused ABC modules (ABC2). No known transmembrane proteins or domains are associated with these proteins.
Probab=90.88 E-value=0.4 Score=27.55 Aligned_cols=108 Identities=14% Similarity=-0.024 Sum_probs=48.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCCCCC-CCCCCCCC---CCCCCCHHHHHCCCCCCCCCCCCCC---CCCCC--C-CC
Q ss_conf 48873277743679999998426754332-10123465---5421002433112555532211100---12344--6-67
Q gi|254780916|r 165 PIMIQGEFGVGKKRLSRFIHESGKRAFFP-FFIVNCGM---IDQDKIEKFLFGDVDLQTKNSAQFL---GKFIE--A-NG 234 (482)
Q Consensus 165 ~vli~Ge~GtGK~~~A~~iH~~s~r~~~~-fi~v~c~~---~~~~~~e~~lFG~~~~~~~~~~~~~---g~~~~--a-~~ 234 (482)
T Consensus 23 ~~iItGpN~sGKSt~Lr~i~l~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~lSgg~~~~~~l~~~l~~~~~~~~ 100 (162)
T cd03227 23 LTIITGPNGSGKSTILDAIGLALGGAQSATRRRSGVKAGCIVAAVSA--ELIFTRLQLSGGEKELSALALILALASLKPR 100 (162)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHEE--EEEECCCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 89998998775799999999999986326775255542776402305--7664120005429999999999985424898
Q ss_pred CEEEECCCCH-HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 1475166420-0188999888877642001123553212343156521433
Q gi|254780916|r 235 GTIVLEEPDA-LPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKN 284 (482)
Q Consensus 235 Gtl~l~ei~~-L~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~~ 284 (482)
T Consensus 101 ~lillDE~~~Gtd~~~~~~l~~~i~~~~~----------~~~~~i~tTH~~ 141 (162)
T cd03227 101 PLYILDEIDRGLDPRDGQALAEAILEHLV----------KGAQVIVITHLP 141 (162)
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHHH----------CCCEEEEECCHH
T ss_conf 48996365579998899999999999997----------699899979739