HHsearch alignment for GI: 254780916 and conserved domain: pfam03969
>pfam03969 AFG1_ATPase AFG1-like ATPase. This family of proteins contains a P-loop motif and are predicted to be ATPases.
Probab=94.17 E-value=0.13 Score=31.09 Aligned_cols=118 Identities=15% Similarity=0.057 Sum_probs=60.5
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHCCCCCCC---CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC-CEE
Q ss_conf 3204887327774367999999842675433---210123465542100243311255553221110012344667-147
Q gi|254780916|r 162 CAIPIMIQGEFGVGKKRLSRFIHESGKRAFF---PFFIVNCGMIDQDKIEKFLFGDVDLQTKNSAQFLGKFIEANG-GTI 237 (482)
Q Consensus 162 ~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~---~fi~v~c~~~~~~~~e~~lFG~~~~~~~~~~~~~g~~~~a~~-Gtl 237 (482)
T Consensus 60 ~~kGlYl~G~VGrGKTmLMDlFy~~lp~~~K~R~HFh~F-M~~vH~~l--~~~~~~~dpl----~-~va-~~l~~~~~lL 130 (361)
T pfam03969 60 PVRGLYLWGGVGRGKTHLMDSFFESLPGERKRRTHFHRF-MFRVHDEL--TTLQGGDDPL----P-IAA-DRFANEARLL 130 (361)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHHH-HHHHHHHH--HHHHCCCCCH----H-HHH-HHHHHCCCEE
T ss_conf 998689889988869999999998677534445667899-99999999--9976677638----9-999-9997258779
Q ss_pred EECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
Q ss_conf 5166420018899988887764200112355321234315652143321111112333799
Q gi|254780916|r 238 VLEEPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDL 298 (482)
Q Consensus 238 ~l~ei~~L~~~~Q~~Ll~~l~~~~~~~~g~~~~~~~~~RiIa~t~~~L~~~~~~g~fr~dL 298 (482)
T Consensus 131 CfDEFqV~DI-aDAMIL~rLf~~Lf~---------~gvvlV~TSN~~P~~LY~~GLqR~~F 181 (361)
T pfam03969 131 CFDEFEVDDI-GDAMILGRLFEALFA---------RGVSLVATSNTAPEQLYRNGLNRQRF 181 (361)
T ss_pred EEEEEEECCH-HHHHHHHHHHHHHHH---------CCCEEEEECCCCHHHHHCCCCCHHHH
T ss_conf 9763561678-889999999999997---------79789980899989983687417788