HHsearch alignment for GI: 254780916 and conserved domain: pfam06068
>pfam06068 TIP49 TIP49 C-terminus. This family consists of the C-terminal region of several eukaryotic and archaeal RuvB-like 1 (Pontin or TIP49a) and RuvB-like 2 (Reptin or TIP49b) proteins. The N-terminal domain contains the pfam00004 domain. In zebrafish, the liebeskummer (lik) mutation, causes development of hyperplastic embryonic hearts. lik encodes Reptin, a component of a DNA-stimulated ATPase complex. Beta-catenin and Pontin, a DNA-stimulated ATPase that is often part of complexes with Reptin, are in the same genetic pathways. The Reptin/Pontin ratio serves to regulate heart growth during development, at least in part via the beta-catenin pathway. TBP-interacting protein 49 (TIP49) was originally identified as a TBP-binding protein, and two related proteins are encoded by individual genes, tip49a and b. Although the function of this gene family has not been elucidated, they are supposed to play a critical role in nuclear events because they interact with various kinds of nuclear
Probab=90.82 E-value=0.18 Score=30.03 Aligned_cols=68 Identities=18% Similarity=0.242 Sum_probs=46.8
Q ss_pred CCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 211111111222222---222222222234432048873277743679999998426754332101234655
Q gi|254780916|r 134 NEHCALDSLIAVSPA---MIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVNCGMI 202 (482)
Q Consensus 134 ~~~~~~~~LiG~S~~---m~~v~~~i~~~a~~~~~vli~Ge~GtGK~~~A~~iH~~s~r~~~~fi~v~c~~~ 202 (482)
T Consensus 18 ~~~~~~~GlVGQ~~AReAagiiv~mIk~~K~aGraiLlaGppGTGKTAlA~aiakeLG-~~vPF~~i~gSEv 88 (395)
T pfam06068 18 EARYVSEGLVGQEKAREAAGVIVEMIKEGKIAGRAVLIAGPPGTGKTALAIAISKELG-EDTPFCPISGSEV 88 (395)
T ss_pred CEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHC-CCCCEEEEEHHEE
T ss_conf 8836457754549999998999999972775773899877999888999999999748-7997345001112