BLAST/PSIBLAST alignment of GI: 254780916 and GI: 116253805 at iteration 1
>gi|116253805|ref|YP_769643.1| two-component response regulator [Rhizobium leguminosarum bv. viciae 3841] Length = 494
>gi|115258453|emb|CAK09556.1| putative two-component response regulator with sigma 54 interacting domain transcriptional regulatory protein [Rhizobium leguminosarum bv. viciae 3841] Length = 494
 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 171/493 (34%), Positives = 277/493 (56%), Gaps = 39/493 (7%)

Query: 22  QIKIIKDHVESYGYDVFIVNVSDLSTISKIQV-------NVIFLSLINCEDDKENILKNI 74
           Q +++K+ +E +G+   +V+ ++   I    V       NVI L L+  E      L  +
Sbjct: 2   QRRLLKNAIERHGH---VVHQAENGRIGLEMVKRDSGLFNVIVLDLMMPEMTGLEFLDAL 58

Query: 75  VDKIPIVPIIVQTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICALR--EGVVPSQ 132
            +    +P+IVQT Q  I+ +   +      F +  VS +++  SI  A++  +  V ++
Sbjct: 59  HEFGTQIPVIVQTGQGGIETVVQAMRAGAFDFVVKPVSPERIATSISNAMKLDQREVKAR 118

Query: 133 ENEHC-----ALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESG 187
                       D +++ SPAM++V+DLA++A    IP++++GE GVGK+ ++R I   G
Sbjct: 119 AGRRSRSGSVGFDDIVSASPAMLRVIDLAQRAAQSNIPVVLEGESGVGKELVARAIQSGG 178

Query: 188 KRAFFPFFIVNCGMIDQDKIEKFLFG-DVDLQTKNSAQFLGKFIEANGGTIVLEEPDALP 246
            R+  PF  VNCG I  + +E  LFG +    T  + + +GKF+EA+GGTI L+E   LP
Sbjct: 179 DRSNKPFVTVNCGAIPHNLVESILFGHEKGAFTGATERHIGKFMEADGGTIFLDEIGDLP 238

Query: 247 LAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLYYRISVFL 306
           L VQ ++   ++ G+IE   +R A +++VRLI  T K+L+ +VK+  FR+DLYYR++VF 
Sbjct: 239 LEVQVKLLRAVQQGEIETVGARTAHKVNVRLISATNKDLIEEVKNGHFREDLYYRLNVFP 298

Query: 307 INISTLRSRSEDIPWLVHFFLQSFCT--KNAIKQISISDKALSLLTKYPWIDNVQELKNI 364
           I I  LR R EDIP LV  F   F +  KN  ++++++   L+LLT Y W  N+++L+N 
Sbjct: 299 ITIPALRKRKEDIPHLVRVFADRFSSEQKNG-RRMTVNAGTLALLTAYDWPGNIRQLENA 357

Query: 365 LLRAVIGLKDSHLTEDRFVLLLSREGKKEREFHTETACTCYTEGKSSDTI---------- 414
           + RAV+  +   LTE  F  + ++    E +     A      G   D            
Sbjct: 358 IFRAVVLAEGPELTEADFPQIAAQ--LPEYDVVDHLALVADNTGLDPDNGYGEDFRASMS 415

Query: 415 ------LDNLSQESIPAIGQDGEVRRLSDIEKEIIGLAMKLYRAQMSEVARRLGIGRSTL 468
                 L   S+ +I ++   G+VR+L+D+E+E+I  A+K YR QMS+VAR+LGIGRSTL
Sbjct: 416 GEVHHRLSEASENAIASVNPAGDVRKLADVEEELIRFALKFYRGQMSQVARKLGIGRSTL 475

Query: 469 YRKIREYNIEVDS 481
           YRK+++Y I+ D+
Sbjct: 476 YRKLKDYGIDPDN 488