BLAST/PSIBLAST alignment of GI: 254780916 and GI: 227823368 at iteration 1
>gi|227823368|ref|YP_002827340.1| sigma-54 dependent DNA-binding response regulator [Sinorhizobium fredii NGR234] Length = 514
>gi|227342369|gb|ACP26587.1| sigma-54 dependent DNA-binding response regulator [Sinorhizobium fredii NGR234] Length = 514
Score = 292 bits (747), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 174/504 (34%), Positives = 282/504 (55%), Gaps = 35/504 (6%)
Query: 13 VLIIDKDDEQIKIIKDHVESYGYDVFIVN--VSDLSTISK--IQVNVIFLSLINCEDDKE 68
+L+ID D Q +++ + +E G+ + + S L + + +NVI L L+ E +
Sbjct: 5 ILVIDDDPVQRRLLTNMIERLGHVAHLADNGRSGLELLERKGGMINVILLDLLMPEMNGH 64
Query: 69 NILKNIVDKIPIVPIIVQTTQDNIKILNCFLYNRISKFFLNLVSRKQLCDSIICAL---- 124
L+ + ++ P+IVQT Q I+ + + F + VS ++L +I AL
Sbjct: 65 GFLEALAERGIDTPVIVQTGQGGIETVVQAMQAGAFDFLVKPVSPERLSIAIGNALKMAS 124
Query: 125 REGVVPSQENEHCA---LDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSR 181
R+G V + D +++ SPAMI+V+DLAR+A IP++++GE GVGK+ ++R
Sbjct: 125 RDGRVKTARRPRGGAIGFDDIVSASPAMIRVLDLARRAAQSNIPVVLEGESGVGKEMVAR 184
Query: 182 FIHESGKRAFFPFFIVNCGMIDQDKIEKFLFG-DVDLQTKNSAQFLGKFIEANGGTIVLE 240
I + RA PF VNCG I + +E LFG + T + + GKF++A+GGT+ L+
Sbjct: 185 AIQAASDRASKPFVTVNCGAIPHNLVESILFGHEKGAFTGATEKHSGKFVDADGGTLFLD 244
Query: 241 EPDALPLAVQGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLYY 300
E LPL VQ ++ ++ G+IE +R R++VRLI T K+L+ +V+ FR+DLYY
Sbjct: 245 EIGDLPLEVQVKLLRAVQQGEIETVGARQPQRVNVRLISATNKDLINEVREGRFREDLYY 304
Query: 301 RISVFLINISTLRSRSEDIPWLVHFFLQSFCTKNAIKQ-ISISDKALSLLTKYPWIDNVQ 359
R++VF I I LR R EDIP LV F++ F + + Q +++S A++LLT Y W N++
Sbjct: 305 RLNVFPITIPALRRRKEDIPVLVRAFVERFTAEQRLNQPVTVSSGAMALLTAYDWPGNIR 364
Query: 360 ELKNILLRAVIGLKDSHLT----------------EDRFVLLLSREGKKEREFHTETACT 403
+L+N + RAV+ + LT DR G + R TA
Sbjct: 365 QLENAIFRAVVLAEGGELTVKDFPQIATQIPGYVVADRSGFSWGEAGPERRPPAGATATV 424
Query: 404 CYTE------GKSSDTILDNLSQESIPAIGQDGEVRRLSDIEKEIIGLAMKLYRAQMSEV 457
+ + + + S+ +I ++ + GEVR+L+++E+E+I A+K YR QMS+V
Sbjct: 425 LPSRPDIPERSEPFGPVPEGRSENAIASVDEGGEVRKLAEVEEELIRFALKFYRGQMSQV 484
Query: 458 ARRLGIGRSTLYRKIREYNIEVDS 481
AR+LGIGRSTLYRK+++Y I+ D+
Sbjct: 485 ARKLGIGRSTLYRKLKDYGIDPDN 508