RPSBLAST alignment for GI: 254780916 and conserved domain: PRK11608
>gnl|CDD|183227 PRK11608, pspF, phage shock protein operon transcriptional activator; Provisional. Length = 326
Score = 95.5 bits (238), Expect = 2e-20
Identities = 66/248 (26%), Positives = 123/248 (49%), Gaps = 2/248 (0%)
Query: 139 LDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRAFFPFFIVN 198
D+L+ + + ++V++ + P++I GE G GK+ ++ +H R PF +N
Sbjct: 5 KDNLLGEANSFLEVLEQVSRLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLN 64
Query: 199 CGMIDQDKIEKFLFG-DVDLQTKNSAQFLGKFIEANGGTIVLEEPDALPLAVQGRIYNFI 257
C ++++ ++ LFG + T + G+F A+GGT+ L+E P+ VQ ++ I
Sbjct: 65 CAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGGTLFLDELATAPMLVQEKLLRVI 124
Query: 258 ETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLYYRISVFLINISTLRSRSE 317
E G++E ++++VRL+ T +L V FR DL R++ ++ + LR R
Sbjct: 125 EYGELERVGGSQPLQVNVRLVCATNADLPAMVAEGKFRADLLDRLAFDVVQLPPLRERQS 184
Query: 318 DIPWLVHFFLQSFCTKNAIKQIS-ISDKALSLLTKYPWIDNVQELKNILLRAVIGLKDSH 376
DI + F C + + +++A L Y W N++ELKN++ R+V S
Sbjct: 185 DIMLMAEHFAIQMCRELGLPLFPGFTERARETLLNYRWPGNIRELKNVVERSVYRHGTSE 244
Query: 377 LTEDRFVL 384
D ++
Sbjct: 245 YPLDNIII 252