RPSBLAST alignment for GI: 254780916 and conserved domain: COG1221

>gnl|CDD|31414 COG1221, PspF, Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms]. Length = 403

 Score =  158 bits (401), Expect = 2e-39
 Identities = 93/344 (27%), Positives = 153/344 (44%), Gaps = 25/344 (7%)

Query: 138 ALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIH-ESGKRAFFPFFI 196
           ALD LI  SP++ ++ +  +      +P++I GE G GK+  +R IH  S +RA  PF  
Sbjct: 76  ALDDLIGESPSLQELREQIKAYAPSGLPVLIIGETGTGKELFARLIHALSARRAEAPFIA 135

Query: 197 VNCGMIDQDKIEKFLFGDVD--LQTKNSAQFLGKFIEANGGTIVLEEPDALPLAVQGRIY 254
            NC    ++  E  LFG            +  G F +ANGGT+ L+E   LP   Q ++ 
Sbjct: 136 FNCAAYSENLQEAELFGHEKGAFTGAQGGKA-GLFEQANGGTLFLDEIHRLPPEGQEKLL 194

Query: 255 NFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRK-DLYYRISVFLINISTLR 313
             +E G+           +DVRLI  T ++L    +  V    DL  R+++  I +  LR
Sbjct: 195 RVLEEGEYRRVGGSQPRPVDVRLICATTEDL----EEAVLAGADLTRRLNILTITLPPLR 250

Query: 314 SRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQELKNILLRAVIGLK 373
            R EDI  L   FL+S   +  +     S +AL  L  Y W  N++ELKN++ RAV    
Sbjct: 251 ERKEDILLLAEHFLKSEARRLGLPLSVDSPEALRALLAYDWPGNIRELKNLVERAVAQAS 310

Query: 374 DSHLTEDRFVLLLSREGKKEREFHTETACTCYTEGKSSDTILDNLSQESIPAIGQDGEVR 433
                 +  ++ +  +                     +D       Q ++P +       
Sbjct: 311 GEGQDLEDLIISIRLDELP----------------GLNDVPAGISLQLNLPELPLSLRET 354

Query: 434 RLSDIEKEIIGLAMKLYRAQMSEVARRLGIGRSTLYRKIREYNI 477
            L  +E+ ++  A++  +    + AR LGI R TL  ++++Y +
Sbjct: 355 SLEQVEERLLQKALEQNKGNKKKAARLLGISRKTLRYRLKKYGL 398