RPSBLAST alignment for GI: 254780916 and conserved domain: COG3604

>gnl|CDD|33404 COG3604, FhlA, Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains [Transcription / Signal transduction mechanisms]. Length = 550

 Score =  204 bits (519), Expect = 7e-53
 Identities = 109/353 (30%), Positives = 173/353 (49%), Gaps = 17/353 (4%)

Query: 131 SQENEHCALDSLIAVSPAMIQVVDLARKAGDCAIPIMIQGEFGVGKKRLSRFIHESGKRA 190
                   +  +I  SPAM Q++            ++I+GE G GK+ ++R IH+   R 
Sbjct: 214 QLSEVVLEVGGIIGRSPAMRQLLKEIEVVAKSDSTVLIRGETGTGKELVARAIHQLSPRR 273

Query: 191 FFPFFIVNCGMIDQDKIEKFLFGDVDLQ-TKNSAQFLGKFIEANGGTIVLEEPDALPLAV 249
             PF  +NC  + +  +E  LFG      T       G+F  A+GGT+ L+E   LPLA+
Sbjct: 274 DKPFVKLNCAALPESLLESELFGHEKGAFTGAINTRRGRFELADGGTLFLDEIGELPLAL 333

Query: 250 QGRIYNFIETGKIEFFDSRGAIRLDVRLIFLTEKNLLPQVKSHVFRKDLYYRISVFLINI 309
           Q ++   ++ G+IE       I++DVR+I  T ++L   V+   FR DLYYR+SVF + +
Sbjct: 334 QAKLLRVLQEGEIERVGGDRTIKVDVRVIAATNRDLEEMVRDGEFRADLYYRLSVFPLEL 393

Query: 310 STLRSRSEDIPWLVHFFLQSFCTKNAIKQISISDKALSLLTKYPWIDNVQELKNILLRAV 369
             LR R EDIP L  +FL+ F  +     +S+S +AL LL+ Y W  NV+EL+N++ RAV
Sbjct: 394 PPLRERPEDIPLLAGYFLEKFRRRLGRAILSLSAEALELLSSYEWPGNVRELENVVERAV 453

Query: 370 IGLKDSHLTEDRFVLLLSREGKKEREFHTETACTCYTEGKSSDTILDNLSQESIPAIGQD 429
             L    LT    +  L             +A    T      +    L + ++P  G+ 
Sbjct: 454 --LLAGRLTRRGDLCTLELSL---------SALLWKTLPAPEPS---ALPEPALP--GEH 497

Query: 430 GEVRRLSDIEKEIIGLAMKLYRAQMSEVARRLGIGRSTLYRKIREYNIEVDSL 482
                  + E+++I  A++      +  ARRLG+ R TL  +++   I+V  L
Sbjct: 498 TLREATEEFERQLIIAALEETNGNWAGAARRLGLTRRTLLYRMKRLGIKVKKL 550